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The map label for this gene is yfiO [C]

Identifier: 99080532

GI number: 99080532

Start: 741250

End: 742101

Strand: Direct

Name: yfiO [C]

Synonym: TM1040_0691

Alternate gene names: 99080532

Gene position: 741250-742101 (Clockwise)

Preceding gene: 99080531

Following gene: 99080533

Centisome position: 23.16

GC content: 57.16

Gene sequence:

>852_bases
ATGATCGGCATCAGGGCAGCAGCCAAAGGGATCGGAGTGGTCGCGCTGATGGCGACCCTTGCCGCATGCGGCGGCGCGGA
TGGGGATGCGCAGCGGTCGTCTTTGGATCTTGAAGGGTTCTCGCCCGCCCAGATTTACGAGCGCGGCGAATTCGAACTGG
CCCGCAGTCGTGAAAAAGATGCGGCCTATTTCTTTTCCGAGGTCGAGCGGCTCTATCCCTATTCCGAATGGGCCAAGCAG
TCCCTGATCATGCAGGCCTTCACCTACCATCAGGCCGAAGACTACGAGAACAGCCGTTCCGCCGCGCAGCGCTATATTGA
CTTTTATCCGACAGATGCTGATGCCGCCTATGCGCAGTATCTTCTCGCCCTGAGCTACTATGACCAGATTGACGAAGTCG
GGCGTGATCAGGGGCTGACCTTCCAGGCTCTGCAAGCGCTGCGGACCGTAATCGAGGTCTATCCCGAGAGCGAATATGCC
AGCTCTGCCATCCTCAAGTTTGATCTCGCCTTTGACCACCTTGCGGGCAAAGAAATGGAAATCGGTCGCTATTATCTGAA
ACGCCAGCACTATTCGGCAGCGATCAACCGCTTCCGTGTGGTGGTGGAAGATTTCCAGACAACGTCCCACACGGCAGAGG
CGCTCTATCGCCTGATCGAGGCGTATCTGTCGCTTGGTCTCACGGATGAGGCGCAGTCTGCTGGCGCGATCCTCGGTCAT
AACTTCCAGTCGACTGATTGGTACGAGGATGGCTATCGGTTGCTGACCGCTCAGGGGTTGAAGCTCAAGGATCGCGGCAA
CAACTGGCTTGCCAAGATCTATCGTCAGTCGATCAAGGGCCAATGGCTCTGA

Upstream 100 bases:

>100_bases
CTGTCGCCCACACGAGGGGTCGAACGGCCTCGCCCGCGCCAAGACGCAGGCGAAAGACGCGGTCGCAAGGCTGTAAACGA
GACGGTGAAGTGAGGCAGGA

Downstream 100 bases:

>100_bases
CGCACAACAGGACAGCGCATTTGACTCCGGGCGGCGGACTGCGCCGCGCGGATGGCGCTCAACACGGGGCATCTAGATGC
TGCGCGCGCTTGATATTCGC

Product: competence lipoprotein ComL, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MIGIRAAAKGIGVVALMATLAACGGADGDAQRSSLDLEGFSPAQIYERGEFELARSREKDAAYFFSEVERLYPYSEWAKQ
SLIMQAFTYHQAEDYENSRSAAQRYIDFYPTDADAAYAQYLLALSYYDQIDEVGRDQGLTFQALQALRTVIEVYPESEYA
SSAILKFDLAFDHLAGKEMEIGRYYLKRQHYSAAINRFRVVVEDFQTTSHTAEALYRLIEAYLSLGLTDEAQSAGAILGH
NFQSTDWYEDGYRLLTAQGLKLKDRGNNWLAKIYRQSIKGQWL

Sequences:

>Translated_283_residues
MIGIRAAAKGIGVVALMATLAACGGADGDAQRSSLDLEGFSPAQIYERGEFELARSREKDAAYFFSEVERLYPYSEWAKQ
SLIMQAFTYHQAEDYENSRSAAQRYIDFYPTDADAAYAQYLLALSYYDQIDEVGRDQGLTFQALQALRTVIEVYPESEYA
SSAILKFDLAFDHLAGKEMEIGRYYLKRQHYSAAINRFRVVVEDFQTTSHTAEALYRLIEAYLSLGLTDEAQSAGAILGH
NFQSTDWYEDGYRLLTAQGLKLKDRGNNWLAKIYRQSIKGQWL
>Mature_283_residues
MIGIRAAAKGIGVVALMATLAACGGADGDAQRSSLDLEGFSPAQIYERGEFELARSREKDAAYFFSEVERLYPYSEWAKQ
SLIMQAFTYHQAEDYENSRSAAQRYIDFYPTDADAAYAQYLLALSYYDQIDEVGRDQGLTFQALQALRTVIEVYPESEYA
SSAILKFDLAFDHLAGKEMEIGRYYLKRQHYSAAINRFRVVVEDFQTTSHTAEALYRLIEAYLSLGLTDEAQSAGAILGH
NFQSTDWYEDGYRLLTAQGLKLKDRGNNWLAKIYRQSIKGQWL

Specific function: Unknown

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788947, Length=245, Percent_Identity=22.0408163265306, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017689
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32068; Mature: 32068

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGIRAAAKGIGVVALMATLAACGGADGDAQRSSLDLEGFSPAQIYERGEFELARSREKD
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCHHHHHHCCCHHHHHCCCHH
AAYFFSEVERLYPYSEWAKQSLIMQAFTYHQAEDYENSRSAAQRYIDFYPTDADAAYAQY
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LLALSYYDQIDEVGRDQGLTFQALQALRTVIEVYPESEYASSAILKFDLAFDHLAGKEME
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHEEHHHHHHHCCCCHH
IGRYYLKRQHYSAAINRFRVVVEDFQTTSHTAEALYRLIEAYLSLGLTDEAQSAGAILGH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHCC
NFQSTDWYEDGYRLLTAQGLKLKDRGNNWLAKIYRQSIKGQWL
CCCCCCCHHCCEEEEEECCCEEECCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIGIRAAAKGIGVVALMATLAACGGADGDAQRSSLDLEGFSPAQIYERGEFELARSREKD
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCHHHHHHCCCHHHHHCCCHH
AAYFFSEVERLYPYSEWAKQSLIMQAFTYHQAEDYENSRSAAQRYIDFYPTDADAAYAQY
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LLALSYYDQIDEVGRDQGLTFQALQALRTVIEVYPESEYASSAILKFDLAFDHLAGKEME
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHEEHHHHHHHCCCCHH
IGRYYLKRQHYSAAINRFRVVVEDFQTTSHTAEALYRLIEAYLSLGLTDEAQSAGAILGH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHCC
NFQSTDWYEDGYRLLTAQGLKLKDRGNNWLAKIYRQSIKGQWL
CCCCCCCHHCCEEEEEECCCEEECCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]