| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99080518
Identifier: 99080518
GI number: 99080518
Start: 723729
End: 724040
Strand: Reverse
Name: 99080518
Synonym: TM1040_0677
Alternate gene names: NA
Gene position: 724040-723729 (Counterclockwise)
Preceding gene: 99080521
Following gene: 99080517
Centisome position: 22.62
GC content: 64.74
Gene sequence:
>312_bases GTGTACCGCCTGACCCTCGCCGCCTGCCTCTGCCTGTCCACAACGCTTGTTTTTGCGCCCTCGGCGCAGGCCGGCACGAT CGAACGCGCCTGTCGCAACTCCGACCGCCAGGCCGCAGAGCCCACGATCTGCCGCTGCATCCAGAAAGTCGCAGAACGTC GGCTCACCAAATCCGAGCAGCGCACCGTCGCCAAGTGGTTTGCAGACCCCCACCGCGCTCAGGAAGTGCGCCAATCCGAC CGGCGCAGCGATGCCCGCCTGTGGGAACGTTACAAACTCTTTGGTACGGACGCCGAACGCATCTGCGGATAA
Upstream 100 bases:
>100_bases CCAAAGGCCGCTGCAAGCCCATTGAAACGCCCTGTTCAGATGTGGAATAGTTGGTCAAATTTTTAGAGAGTTTCACCGTG CCAACCGGAGAAAGATCATC
Downstream 100 bases:
>100_bases ACGCGCCGACCCCACCTCAGAAACTCTGTTAAAAAATGGTTAATCCGCGCTGCAATTAACCATTTTTTCTTTCAAAAAGG CAAAACTCACCGCCTCGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 103; Mature: 103
Protein sequence:
>103_residues MYRLTLAACLCLSTTLVFAPSAQAGTIERACRNSDRQAAEPTICRCIQKVAERRLTKSEQRTVAKWFADPHRAQEVRQSD RRSDARLWERYKLFGTDAERICG
Sequences:
>Translated_103_residues MYRLTLAACLCLSTTLVFAPSAQAGTIERACRNSDRQAAEPTICRCIQKVAERRLTKSEQRTVAKWFADPHRAQEVRQSD RRSDARLWERYKLFGTDAERICG >Mature_103_residues MYRLTLAACLCLSTTLVFAPSAQAGTIERACRNSDRQAAEPTICRCIQKVAERRLTKSEQRTVAKWFADPHRAQEVRQSD RRSDARLWERYKLFGTDAERICG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11807; Mature: 11807
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 5.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRLTLAACLCLSTTLVFAPSAQAGTIERACRNSDRQAAEPTICRCIQKVAERRLTKSEQ CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH RTVAKWFADPHRAQEVRQSDRRSDARLWERYKLFGTDAERICG HHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHCC >Mature Secondary Structure MYRLTLAACLCLSTTLVFAPSAQAGTIERACRNSDRQAAEPTICRCIQKVAERRLTKSEQ CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH RTVAKWFADPHRAQEVRQSDRRSDARLWERYKLFGTDAERICG HHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA