| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is pitA [C]
Identifier: 99080449
GI number: 99080449
Start: 647574
End: 649058
Strand: Reverse
Name: pitA [C]
Synonym: TM1040_0608
Alternate gene names: 99080449
Gene position: 649058-647574 (Counterclockwise)
Preceding gene: 99080450
Following gene: 99080448
Centisome position: 20.28
GC content: 59.33
Gene sequence:
>1485_bases GTGTCCCAAAACGATCTAGAGCCGCGTCACCTTGAAACCCTGGACCGCGACCTTGATCGCCTGTCCTCGCTGGAACAGGC GACAGCCTATGTGGGGCGGTCGAATGTCGGGCTTGGTCTCGCCTTCATGTTCATCCTGATCGTCGCTGCAGCGACCGGAT TGATGCTCGGCAGTGCCGACAACACGTTTATCATCGTGATCGCCGCCGCCTTTGGCGCCTATATGGCGCTCAATATTGGG GCCAATGATGTGGCCAACAACATGGGTCCTGCGGTTGGGGCAAACGCCATGTCGATGGGCTTTGCCATCGTGGTTGCGGC CATCTTTGAGAGCGCGGGCGCCCTGATTGCGGGCGGAGATGTGGTTTCGACCATCGCCAAAGGGATCATCTCGCCCGATA CCATGGCGACCTCTTCGATGTTCATCGCCGCTATGCTTGCCGCCCTTCTGGCCTCGGCACTCTGGGTCAACCTTGCAACC TGGATCGGTGCACCTGTTTCCACCACGCATGCGGTTGTAGGGGGCGTCATGGGCGCCGGGATCGCGGCCGCCGGTTTTGC CGCCGTGAACTGGAGTAAAATGAGCGCAATCGCCGCCAGCTGGGTGATCTCGCCGCTCTTGGGTGGACTGATCGCGGCCG GGTTCCTGTGGCTCATCAAGTCGCGCATCATCTACCGCGAAGACAAGATTTCTGCAGCGCGCACCTGGGTCCCCATTCTG GTGGGCATCATGGCGGGAGCATTCGCCTCTTACCTCGCGGTCAAAGGCCTGAAAAAGCTCATCAAAATTGACCTCTCGCA TTCACTGATGATTGGTCTTGTGGTTGCGCTTCTGGTCTGGATGCTCATGATCCCCGTGATCCGCAAACAGTCGAAGGGAT TGGAGAACAGAAACAAATCGCTGAAGGTGCTCTTCTCGATCCCACTGATTGTCTCGGCGGCCCTGCTGAGCTTTGCGCAT GGTGCAAACGATGTGGCAAACGCGGTTGGACCGCTTGCGGCAATCGTGCAGGCGTCGACCTCTGGGGATTTCACCCATGC AGTCTCAATCCCTTTCTGGGTGATGATTATCGGGGCCTTCGGGATTTCCTTTGGTCTCTTCCTGTTTGGCCCCAAACTGA TCCGCATGGTGGGCAGCCAGATCACCAAACTGAACCCGATGCGGGCATATTGCGTGGCGCTGTCTGCGGCCATCACGGTG ATCGTGGCAAGCTGGCTCGGCCTTCCGGTGAGCTCCACACATATCGCGATTGGCGGCGTCTTTGGCGTTGGATTCTTCCG CGAATGGGACACAGAGCGCCGCATGCGCAAGTCTAAGGCCGTCAAGGCAGATGCGCCCAACGTAGGCCCCGAAGAGCGCC GCCGCCGCAAACTGGTGCGACGCTCACATTTCCTGACCATCATCGCGGCCTGGGTCATCACCGTCCCCGCTGCCGCGACG CTCTCTGGGGTGTTGTTCGTGCTGATCAACCGGATGGTGGGATAA
Upstream 100 bases:
>100_bases GGATCAACAGGAACTCCTTCAGGGCAAGGCGGCATATACGTTGCCCGGGTGTCACAAAACCGTTACAGACGCGGCGCGCA AAAACGAATGGAGAGGACGG
Downstream 100 bases:
>100_bases GTCCCCCCTTCCCCATCGATTTTGATGCGGCCCGCCCCACTGGCGGGTCGTTTTCTTTTCAGGTCAGGCTTCCTATGATC GCATTCAACAGGAGCACATA
Product: phosphate transporter
Products: Proton [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 494; Mature: 493
Protein sequence:
>494_residues MSQNDLEPRHLETLDRDLDRLSSLEQATAYVGRSNVGLGLAFMFILIVAAATGLMLGSADNTFIIVIAAAFGAYMALNIG ANDVANNMGPAVGANAMSMGFAIVVAAIFESAGALIAGGDVVSTIAKGIISPDTMATSSMFIAAMLAALLASALWVNLAT WIGAPVSTTHAVVGGVMGAGIAAAGFAAVNWSKMSAIAASWVISPLLGGLIAAGFLWLIKSRIIYREDKISAARTWVPIL VGIMAGAFASYLAVKGLKKLIKIDLSHSLMIGLVVALLVWMLMIPVIRKQSKGLENRNKSLKVLFSIPLIVSAALLSFAH GANDVANAVGPLAAIVQASTSGDFTHAVSIPFWVMIIGAFGISFGLFLFGPKLIRMVGSQITKLNPMRAYCVALSAAITV IVASWLGLPVSSTHIAIGGVFGVGFFREWDTERRMRKSKAVKADAPNVGPEERRRRKLVRRSHFLTIIAAWVITVPAAAT LSGVLFVLINRMVG
Sequences:
>Translated_494_residues MSQNDLEPRHLETLDRDLDRLSSLEQATAYVGRSNVGLGLAFMFILIVAAATGLMLGSADNTFIIVIAAAFGAYMALNIG ANDVANNMGPAVGANAMSMGFAIVVAAIFESAGALIAGGDVVSTIAKGIISPDTMATSSMFIAAMLAALLASALWVNLAT WIGAPVSTTHAVVGGVMGAGIAAAGFAAVNWSKMSAIAASWVISPLLGGLIAAGFLWLIKSRIIYREDKISAARTWVPIL VGIMAGAFASYLAVKGLKKLIKIDLSHSLMIGLVVALLVWMLMIPVIRKQSKGLENRNKSLKVLFSIPLIVSAALLSFAH GANDVANAVGPLAAIVQASTSGDFTHAVSIPFWVMIIGAFGISFGLFLFGPKLIRMVGSQITKLNPMRAYCVALSAAITV IVASWLGLPVSSTHIAIGGVFGVGFFREWDTERRMRKSKAVKADAPNVGPEERRRRKLVRRSHFLTIIAAWVITVPAAAT LSGVLFVLINRMVG >Mature_493_residues SQNDLEPRHLETLDRDLDRLSSLEQATAYVGRSNVGLGLAFMFILIVAAATGLMLGSADNTFIIVIAAAFGAYMALNIGA NDVANNMGPAVGANAMSMGFAIVVAAIFESAGALIAGGDVVSTIAKGIISPDTMATSSMFIAAMLAALLASALWVNLATW IGAPVSTTHAVVGGVMGAGIAAAGFAAVNWSKMSAIAASWVISPLLGGLIAAGFLWLIKSRIIYREDKISAARTWVPILV GIMAGAFASYLAVKGLKKLIKIDLSHSLMIGLVVALLVWMLMIPVIRKQSKGLENRNKSLKVLFSIPLIVSAALLSFAHG ANDVANAVGPLAAIVQASTSGDFTHAVSIPFWVMIIGAFGISFGLFLFGPKLIRMVGSQITKLNPMRAYCVALSAAITVI VASWLGLPVSSTHIAIGGVFGVGFFREWDTERRMRKSKAVKADAPNVGPEERRRRKLVRRSHFLTIIAAWVITVPAAATL SGVLFVLINRMVG
Specific function: Potential transporter for phosphate [H]
COG id: COG0306
COG function: function code P; Phosphate/sulphate permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inorganic phosphate transporter (PiT) (TC 2.A.20) family [H]
Homologues:
Organism=Homo sapiens, GI31543630, Length=299, Percent_Identity=27.7591973244147, Blast_Score=125, Evalue=1e-28, Organism=Homo sapiens, GI5803173, Length=244, Percent_Identity=29.9180327868852, Blast_Score=112, Evalue=6e-25, Organism=Escherichia coli, GI1789907, Length=266, Percent_Identity=27.4436090225564, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI1789360, Length=156, Percent_Identity=31.4102564102564, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI25146401, Length=488, Percent_Identity=27.2540983606557, Blast_Score=175, Evalue=4e-44, Organism=Caenorhabditis elegans, GI32566716, Length=425, Percent_Identity=31.5294117647059, Blast_Score=171, Evalue=8e-43, Organism=Caenorhabditis elegans, GI17557328, Length=464, Percent_Identity=24.3534482758621, Blast_Score=135, Evalue=6e-32, Organism=Caenorhabditis elegans, GI71981576, Length=218, Percent_Identity=31.651376146789, Blast_Score=111, Evalue=9e-25, Organism=Caenorhabditis elegans, GI17539280, Length=253, Percent_Identity=30.8300395256917, Blast_Score=109, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17536725, Length=456, Percent_Identity=21.4912280701754, Blast_Score=97, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6319773, Length=142, Percent_Identity=34.5070422535211, Blast_Score=100, Evalue=7e-22, Organism=Drosophila melanogaster, GI21356511, Length=202, Percent_Identity=34.6534653465347, Blast_Score=118, Evalue=9e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001204 [H]
Pfam domain/function: PF01384 PHO4 [H]
EC number: NA
Molecular weight: Translated: 51917; Mature: 51786
Theoretical pI: Translated: 10.83; Mature: 10.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQNDLEPRHLETLDRDLDRLSSLEQATAYVGRSNVGLGLAFMFILIVAAATGLMLGSAD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC NTFIIVIAAAFGAYMALNIGANDVANNMGPAVGANAMSMGFAIVVAAIFESAGALIAGGD CCEEEEEHHHHHHHHEEECCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECHH VVSTIAKGIISPDTMATSSMFIAAMLAALLASALWVNLATWIGAPVSTTHAVVGGVMGAG HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH IAAAGFAAVNWSKMSAIAASWVISPLLGGLIAAGFLWLIKSRIIYREDKISAARTWVPIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGIMAGAFASYLAVKGLKKLIKIDLSHSLMIGLVVALLVWMLMIPVIRKQSKGLENRNKS HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC LKVLFSIPLIVSAALLSFAHGANDVANAVGPLAAIVQASTSGDFTHAVSIPFWVMIIGAF EEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHH GISFGLFLFGPKLIRMVGSQITKLNPMRAYCVALSAAITVIVASWLGLPVSSTHIAIGGV HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHH FGVGFFREWDTERRMRKSKAVKADAPNVGPEERRRRKLVRRSHFLTIIAAWVITVPAAAT HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSGVLFVLINRMVG HHHHHHHHHHHHCC >Mature Secondary Structure SQNDLEPRHLETLDRDLDRLSSLEQATAYVGRSNVGLGLAFMFILIVAAATGLMLGSAD CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC NTFIIVIAAAFGAYMALNIGANDVANNMGPAVGANAMSMGFAIVVAAIFESAGALIAGGD CCEEEEEHHHHHHHHEEECCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECHH VVSTIAKGIISPDTMATSSMFIAAMLAALLASALWVNLATWIGAPVSTTHAVVGGVMGAG HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH IAAAGFAAVNWSKMSAIAASWVISPLLGGLIAAGFLWLIKSRIIYREDKISAARTWVPIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGIMAGAFASYLAVKGLKKLIKIDLSHSLMIGLVVALLVWMLMIPVIRKQSKGLENRNKS HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC LKVLFSIPLIVSAALLSFAHGANDVANAVGPLAAIVQASTSGDFTHAVSIPFWVMIIGAF EEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHH GISFGLFLFGPKLIRMVGSQITKLNPMRAYCVALSAAITVIVASWLGLPVSSTHIAIGGV HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHH FGVGFFREWDTERRMRKSKAVKADAPNVGPEERRRRKLVRRSHFLTIIAAWVITVPAAAT HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSGVLFVLINRMVG HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; phosphate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + phosphate [Periplasm] = Proton [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9252185 [H]