Click here to switch to the map view.

The map label for this gene is 99080448

Identifier: 99080448

GI number: 99080448

Start: 646940

End: 647470

Strand: Reverse

Name: 99080448

Synonym: TM1040_0607

Alternate gene names: NA

Gene position: 647470-646940 (Counterclockwise)

Preceding gene: 99080449

Following gene: 99080445

Centisome position: 20.23

GC content: 61.02

Gene sequence:

>531_bases
ATGGCCACCAAAGACACATTCGAGCGGACCGAAGCGATGATGGGCATGACCCCCGAAATCTGGGCGCGCCATGCAAACCC
GTGGAGTGGCTGGACACGGCTAACAATCCTGCCCCTGTTTGCCCTCGCAGTCTGGAGCCGCGTCTGGCTTGGCTGGGGCG
CCCTTGTCCCTGTTGTGCTTGTTCTGATCTGGACCTGGCTCAATCCGCGCATCTTTCCCCGACCGAAGCGCACGGACAAC
TGGATGTCACGCGGTGTTCAGGGAGAGCAGATCTGGCTGCGCCACAAGACCGCGCCAGAACTCAGCCATCACCTTGCCGT
CGTCCGCCAGATCACGCTTCTGAGTGCGGCCGGGGCGCTGGCCTATCTTGTGGGACTTATCCTGTTGTGGCCCGGTCTTA
CGCTGACTGGGCTTTGTATCGCGAGTCTTGGCAAACTGTGGATGCTTGATCGCATGGTCTGGGTCCTCGCGGATGTTCAG
CACTCAGGCACTCTCGCCCATGACGACGCGGATCAAGACGTCACGGGGTGA

Upstream 100 bases:

>100_bases
CCCCCTTCCCCATCGATTTTGATGCGGCCCGCCCCACTGGCGGGTCGTTTTCTTTTCAGGTCAGGCTTCCTATGATCGCA
TTCAACAGGAGCACATAAGC

Downstream 100 bases:

>100_bases
CCCTCAAACTGCTCCGCGCTGTCGCAGATTTCGTACCAGGACGGTTTCTCCGCAACAAACTCGTGAAAGCGGTTGCGTAT
CTCGAGGTCACCATCAAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MATKDTFERTEAMMGMTPEIWARHANPWSGWTRLTILPLFALAVWSRVWLGWGALVPVVLVLIWTWLNPRIFPRPKRTDN
WMSRGVQGEQIWLRHKTAPELSHHLAVVRQITLLSAAGALAYLVGLILLWPGLTLTGLCIASLGKLWMLDRMVWVLADVQ
HSGTLAHDDADQDVTG

Sequences:

>Translated_176_residues
MATKDTFERTEAMMGMTPEIWARHANPWSGWTRLTILPLFALAVWSRVWLGWGALVPVVLVLIWTWLNPRIFPRPKRTDN
WMSRGVQGEQIWLRHKTAPELSHHLAVVRQITLLSAAGALAYLVGLILLWPGLTLTGLCIASLGKLWMLDRMVWVLADVQ
HSGTLAHDDADQDVTG
>Mature_175_residues
ATKDTFERTEAMMGMTPEIWARHANPWSGWTRLTILPLFALAVWSRVWLGWGALVPVVLVLIWTWLNPRIFPRPKRTDNW
MSRGVQGEQIWLRHKTAPELSHHLAVVRQITLLSAAGALAYLVGLILLWPGLTLTGLCIASLGKLWMLDRMVWVLADVQH
SGTLAHDDADQDVTG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19866; Mature: 19734

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: PS00622 HTH_LUXR_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATKDTFERTEAMMGMTPEIWARHANPWSGWTRLTILPLFALAVWSRVWLGWGALVPVVL
CCCHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLIWTWLNPRIFPRPKRTDNWMSRGVQGEQIWLRHKTAPELSHHLAVVRQITLLSAAGAL
HHHHHHCCCCCCCCCCCCHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
AYLVGLILLWPGLTLTGLCIASLGKLWMLDRMVWVLADVQHSGTLAHDDADQDVTG
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ATKDTFERTEAMMGMTPEIWARHANPWSGWTRLTILPLFALAVWSRVWLGWGALVPVVL
CCHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLIWTWLNPRIFPRPKRTDNWMSRGVQGEQIWLRHKTAPELSHHLAVVRQITLLSAAGAL
HHHHHHCCCCCCCCCCCCHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
AYLVGLILLWPGLTLTGLCIASLGKLWMLDRMVWVLADVQHSGTLAHDDADQDVTG
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA