| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is purE [H]
Identifier: 99080445
GI number: 99080445
Start: 644794
End: 645282
Strand: Reverse
Name: purE [H]
Synonym: TM1040_0604
Alternate gene names: 99080445
Gene position: 645282-644794 (Counterclockwise)
Preceding gene: 99080448
Following gene: 99080444
Centisome position: 20.16
GC content: 63.8
Gene sequence:
>489_bases ATGGCCGACATCAAAGTAGGGATCATCATGGGGAGCCAGTCCGACTGGCCCACGATGAAGGAAGCAGCCAACATCCTTGA CGAACTGGGCGTTGCCTATGAAACGCGGATCGTTTCGGCTCACCGCACGCCGGACCGGTTGTGGGACTATGGCAAGACCG CAGCAGAGCGCGGCCTGCATGTGATTATCGCAGGCGCGGGCGGCGCGGCGCATTTGCCCGGCATGATGGCGTCAAAGACC CGTGTGCCCGTGGTTGGCGTGCCCGTCCAGACCCGTGCCTTGTCCGGTGTCGACAGCCTTTATTCGATCGTGCAGATGCC CAAAGGATTTCCAGTTGCCACCATGGCGATTGGTGCCGCGGGCGCTGCCAACGCAGGCCTGATGGCCGCCGGCATTCTCG CCACCAGCGACGCCGCGCTGGCAGAACGTCTTGACGCCTGGCGCGACGCGCTTGCCGCCTCCATTCCCGAGGAGCCTACC GATGACTGA
Upstream 100 bases:
>100_bases GACCAGAGAGTTTTGCAACTGCAGCAAATCCCCCCGCAACGCATTGCTATTTTGGTCATTTTCGCTAAGGTGCGCGCTCC TTCCACTGTAGAGGCGAGAT
Downstream 100 bases:
>100_bases TCTCGACCAAATCCTCGAACCCGGTGCCGTAATCGGCATTCTGGGCGGTGGTCAGCTTGGCCGGATGCTGTCGGTTGCAG CCTCCCGCCTTGGCTTCACC
Product: phosphoribosylaminoimidazole carboxylase, catalytic subunit
Products: NA
Alternate protein names: N5-CAIR mutase; 5-(carboxyamino)imidazole ribonucleotide mutase [H]
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MADIKVGIIMGSQSDWPTMKEAANILDELGVAYETRIVSAHRTPDRLWDYGKTAAERGLHVIIAGAGGAAHLPGMMASKT RVPVVGVPVQTRALSGVDSLYSIVQMPKGFPVATMAIGAAGAANAGLMAAGILATSDAALAERLDAWRDALAASIPEEPT DD
Sequences:
>Translated_162_residues MADIKVGIIMGSQSDWPTMKEAANILDELGVAYETRIVSAHRTPDRLWDYGKTAAERGLHVIIAGAGGAAHLPGMMASKT RVPVVGVPVQTRALSGVDSLYSIVQMPKGFPVATMAIGAAGAANAGLMAAGILATSDAALAERLDAWRDALAASIPEEPT DD >Mature_161_residues ADIKVGIIMGSQSDWPTMKEAANILDELGVAYETRIVSAHRTPDRLWDYGKTAAERGLHVIIAGAGGAAHLPGMMASKTR VPVVGVPVQTRALSGVDSLYSIVQMPKGFPVATMAIGAAGAANAGLMAAGILATSDAALAERLDAWRDALAASIPEEPTD D
Specific function: Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) [H]
COG id: COG0041
COG function: function code F; Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AIR carboxylase family [H]
Homologues:
Organism=Escherichia coli, GI1786734, Length=155, Percent_Identity=62.5806451612903, Blast_Score=167, Evalue=3e-43, Organism=Saccharomyces cerevisiae, GI6324702, Length=142, Percent_Identity=53.5211267605634, Blast_Score=152, Evalue=3e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000031 [H]
Pfam domain/function: PF00731 AIRC [H]
EC number: =5.4.99.18 [H]
Molecular weight: Translated: 16752; Mature: 16621
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADIKVGIIMGSQSDWPTMKEAANILDELGVAYETRIVSAHRTPDRLWDYGKTAAERGLH CCCEEEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHEEECCCCHHHHHHHCHHHHHCCCE VIIAGAGGAAHLPGMMASKTRVPVVGVPVQTRALSGVDSLYSIVQMPKGFPVATMAIGAA EEEECCCCHHHCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCC GAANAGLMAAGILATSDAALAERLDAWRDALAASIPEEPTDD CCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure ADIKVGIIMGSQSDWPTMKEAANILDELGVAYETRIVSAHRTPDRLWDYGKTAAERGLH CCEEEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHEEECCCCHHHHHHHCHHHHHCCCE VIIAGAGGAAHLPGMMASKTRVPVVGVPVQTRALSGVDSLYSIVQMPKGFPVATMAIGAA EEEECCCCHHHCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCC GAANAGLMAAGILATSDAALAERLDAWRDALAASIPEEPTDD CCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12620739 [H]