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The map label for this gene is pldB [H]

Identifier: 99080411

GI number: 99080411

Start: 607521

End: 608468

Strand: Reverse

Name: pldB [H]

Synonym: TM1040_0570

Alternate gene names: 99080411

Gene position: 608468-607521 (Counterclockwise)

Preceding gene: 99080412

Following gene: 99080410

Centisome position: 19.01

GC content: 62.66

Gene sequence:

>948_bases
ATGGCAGAAACCGCCCCCGCGCCCTATTTCAGCGAGATTGCGCGCGGCCCGGATCAGGTCGAGGCCCATTGGCTGACCAC
TCAGGATGGTCAGCGTATCCGCGCAGGCCTCTGGCGTAGCCACGGTCCTTCTGCGGGCACAATCCTGCTGTTTCCCGGTC
GCACAGAATACATCGAGAAATATGGCCCACTGGCCATTGACCTGACGGATCGGGGTTTTGACGTCCTGACCGTGGACTGG
CGCGGACAGGGGCTTGCGGATCGCAGCCTGAGCGATGGCCGCCTCGGGCATGTTGCAGAATTTGGCGCGTTCCAGCTCGA
CGTGGCGGCGCTGGTGGCGCATGCCGAGGCCCTCAACTTGCCACGCCCGTGGTATCTGCTGGGACATTCCATGGGCGGCG
CCATCGGCCTGCGGGCTCTCCACGAGGGTCTGCCAGTTGCGGCCTGCGCCTTCACTGCCCCGATGTGGGCGATCCGCATT
CCCTTTGCGCTGCGACCGGCTGCCCGGCTTTTGGCGCGGTTTGGGACGGCGCTGGGTGTGAGCGAGAAGCTGGTGCCCAC
AACCACCATCGAACAATACGTCCAGGTCACACCCTTTGAGGGCAACACGCTGACAAATGACCCGGAAATGTACGCTTTCT
TGCAGATGCAGATGACCCAGCACCCCGAATTGGCCCTCGGGGGGCCGACGGTACAATGGTTGTCTCAGGCCATGCTGGAG
TGCGCAGATCTGCGCGCGCGCCCCTCACCCGATGTGCCTTGCGTGACCTTTCTGGGGGAAAACGAACAGATCGTCGCCAC
AGAGGCCATTCATGATCGCATGGCACGCTGGCCATCAGGCAAGCTCGAGATGATCCCGGACGCCCAGCACGAAATCCTGA
TGGAAATCCCTCAGACACGCAGGCAGACCTGCGCCATCCTGACGGCGCACTTCAAAAAACACGTCTAG

Upstream 100 bases:

>100_bases
CCGCAGCTTTCATGGGCGGCAAACTCACCATCGACGGCGATATGGGCGTTGCAATGCAGCTGGCGCAGGCACTGGCCTGA
CGACAATGAAGGATCAGCCA

Downstream 100 bases:

>100_bases
GCCCGGTACAATCACAGAGATCCGCGCGGGCTGGCCGCAGCTTGGTCGCACGATGTTTCTCCGCTCGTCGCTGGCTCTGT
GCTTGTGCCTCGCGCTTGCC

Product: alpha/beta hydrolase fold

Products: NA

Alternate protein names: Lecithinase B [H]

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MAETAPAPYFSEIARGPDQVEAHWLTTQDGQRIRAGLWRSHGPSAGTILLFPGRTEYIEKYGPLAIDLTDRGFDVLTVDW
RGQGLADRSLSDGRLGHVAEFGAFQLDVAALVAHAEALNLPRPWYLLGHSMGGAIGLRALHEGLPVAACAFTAPMWAIRI
PFALRPAARLLARFGTALGVSEKLVPTTTIEQYVQVTPFEGNTLTNDPEMYAFLQMQMTQHPELALGGPTVQWLSQAMLE
CADLRARPSPDVPCVTFLGENEQIVATEAIHDRMARWPSGKLEMIPDAQHEILMEIPQTRRQTCAILTAHFKKHV

Sequences:

>Translated_315_residues
MAETAPAPYFSEIARGPDQVEAHWLTTQDGQRIRAGLWRSHGPSAGTILLFPGRTEYIEKYGPLAIDLTDRGFDVLTVDW
RGQGLADRSLSDGRLGHVAEFGAFQLDVAALVAHAEALNLPRPWYLLGHSMGGAIGLRALHEGLPVAACAFTAPMWAIRI
PFALRPAARLLARFGTALGVSEKLVPTTTIEQYVQVTPFEGNTLTNDPEMYAFLQMQMTQHPELALGGPTVQWLSQAMLE
CADLRARPSPDVPCVTFLGENEQIVATEAIHDRMARWPSGKLEMIPDAQHEILMEIPQTRRQTCAILTAHFKKHV
>Mature_314_residues
AETAPAPYFSEIARGPDQVEAHWLTTQDGQRIRAGLWRSHGPSAGTILLFPGRTEYIEKYGPLAIDLTDRGFDVLTVDWR
GQGLADRSLSDGRLGHVAEFGAFQLDVAALVAHAEALNLPRPWYLLGHSMGGAIGLRALHEGLPVAACAFTAPMWAIRIP
FALRPAARLLARFGTALGVSEKLVPTTTIEQYVQVTPFEGNTLTNDPEMYAFLQMQMTQHPELALGGPTVQWLSQAMLEC
ADLRARPSPDVPCVTFLGENEQIVATEAIHDRMARWPSGKLEMIPDAQHEILMEIPQTRRQTCAILTAHFKKHV

Specific function: Unknown

COG id: COG2267

COG function: function code I; Lysophospholipase

Gene ontology:

Cell location: Cell inner membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994980, Length=289, Percent_Identity=31.8339100346021, Blast_Score=112, Evalue=5e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: =3.1.1.5 [H]

Molecular weight: Translated: 34692; Mature: 34561

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAETAPAPYFSEIARGPDQVEAHWLTTQDGQRIRAGLWRSHGPSAGTILLFPGRTEYIEK
CCCCCCCCHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCEEEEECCCHHHHHH
YGPLAIDLTDRGFDVLTVDWRGQGLADRSLSDGRLGHVAEFGAFQLDVAALVAHAEALNL
CCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCC
PRPWYLLGHSMGGAIGLRALHEGLPVAACAFTAPMWAIRIPFALRPAARLLARFGTALGV
CCCEEEEECCCCCHHHHHHHHCCCCHHHHHHHCCCEEEECCHHCCHHHHHHHHHHHHHCC
SEKLVPTTTIEQYVQVTPFEGNTLTNDPEMYAFLQMQMTQHPELALGGPTVQWLSQAMLE
CCCCCCHHHHHHHEEECCCCCCCCCCCCHHEEEEEEHHCCCCCEEECCCHHHHHHHHHHH
CADLRARPSPDVPCVTFLGENEQIVATEAIHDRMARWPSGKLEMIPDAQHEILMEIPQTR
HHHCCCCCCCCCCEEEEECCCCEEEEHHHHHHHHHHCCCCCEEECCCHHHHHHHHCHHHH
RQTCAILTAHFKKHV
HHHHHHHHHHHHHCC
>Mature Secondary Structure 
AETAPAPYFSEIARGPDQVEAHWLTTQDGQRIRAGLWRSHGPSAGTILLFPGRTEYIEK
CCCCCCCHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCEEEEECCCHHHHHH
YGPLAIDLTDRGFDVLTVDWRGQGLADRSLSDGRLGHVAEFGAFQLDVAALVAHAEALNL
CCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCC
PRPWYLLGHSMGGAIGLRALHEGLPVAACAFTAPMWAIRIPFALRPAARLLARFGTALGV
CCCEEEEECCCCCHHHHHHHHCCCCHHHHHHHCCCEEEECCHHCCHHHHHHHHHHHHHCC
SEKLVPTTTIEQYVQVTPFEGNTLTNDPEMYAFLQMQMTQHPELALGGPTVQWLSQAMLE
CCCCCCHHHHHHHEEECCCCCCCCCCCCHHEEEEEEHHCCCCCEEECCCHHHHHHHHHHH
CADLRARPSPDVPCVTFLGENEQIVATEAIHDRMARWPSGKLEMIPDAQHEILMEIPQTR
HHHCCCCCCCCCCEEEEECCCCEEEEHHHHHHHHHHCCCCCEEECCCHHHHHHHHCHHHH
RQTCAILTAHFKKHV
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]