Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is pobA [H]

Identifier: 99080402

GI number: 99080402

Start: 597039

End: 598208

Strand: Reverse

Name: pobA [H]

Synonym: TM1040_0561

Alternate gene names: 99080402

Gene position: 598208-597039 (Counterclockwise)

Preceding gene: 99080405

Following gene: 99080401

Centisome position: 18.69

GC content: 58.63

Gene sequence:

>1170_bases
ATGCGCACACAGGTTGTAATTGTTGGTGGCGGCCCATCAGGAATGCTGCTGGGACAGCTTTTGCACCTCAATGGCATCGA
CACCATCGTCCTGGAACGACGGACCAAGGAGCATGTGCTCAGCCGCATTCGCGCCGGCATCCTCGAGCAGGGCTTGGTTG
AGCTGATGCATAAAGCAGGCGTCGGTGCGCGGCTCGAGCGCGAGAGCTTTCGCCATCACGGGACATTGATTTCACACAAT
GACGAGATGTTCGGCATAAATTTTGAGCGCCTGATCGGTAAATCGGTGACGCTATATGGCCAAACCGAGGTGACCCGCGA
TCTCTATGAGGCGCGCGAAAGCGTTGGCGCGACCACGTTTTTTGACGTCGAAGATGCCACAATCCACGATGCTGACACCG
AGAGCCCCTATGTCACCTTTCAAAAGGACGGCAAAGAGACTCGCATCGATTGCGATTTCATCGCGGGCTGCGACGGGTTT
CATGGTGTCAGCCGACGCACGATCCCGGCCTCTGTCCGCACGGAATACGAAAAAGTCTATCCCTTTGGCTGGCTCGGCAT
CCTGTCCGAAACCCCGCCCGTCAATGAGGAGTTGATCTACGCCAATTCAGAGGACGGGTTCGCGCTCTGTTCGATGCGCA
ACGCCAATCTCAGCCGCTATTACGTTCAATGCTCTCTGGGCGATGACGTGGGCGATTGGACAGATACCCGGTTCTGGGAC
ACCCTGCGCCGCCGCCTGCCGAGCGAGGTCGCAGAGGCCCTGGTCACAGGCCCCTCGATCGAGAAGTCCATCGCACCGCT
GCGCTCGTTTGTGAGCGAGCCAATGCGCTGGGGGCGGCTGTTCCTCTGCGGCGATGCGGCTCATATCGTGCCGCCAACCG
GGGCGAAGGGTCTGAATACTGCCGCCTCGGACGTGCATTACCTCTACACGGGATTGATCCAGTATTATGAGGACAAAGAC
AGCGAAGGGATCGATCGCTACTCCGAAAAAGCCCTCGCCCGTGTTTGGAAGGCGGAGCGGTTCAGCTGGTGGATGACGTC
CTTGCTGCATCGGTTCCCCGACCAAGGTCCGTTTGACGTAAAGATGCAGGCGGCAGAACTGGCGTTCCTGCGCGACAACA
AGGACGCGCAACGCGTGCTTGCCACCAACTATGTCGGGCTGCCTTACTGA

Upstream 100 bases:

>100_bases
CGTGCTGATAGTTTACCATATTGGTATTCATACCTGCCAATAACTCATTTTTGAATAATGAAATTGCATGATAGCCTTTG
CTCCATTGGAGGAGACGATC

Downstream 100 bases:

>100_bases
TGCGGGTAGCACGCCTGCAAAACGCCATGCTGCATTGGCGAGAGGACGGCAGCCCGGATGGCCCGGCAGTGGTCTTTGCC
AACTCGCTTGGGACCGATCT

Product: 4-hydroxybenzoate 3-monooxygenase

Products: NA

Alternate protein names: PHBH; 4-hydroxybenzoate 3-monooxygenase [H]

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MRTQVVIVGGGPSGMLLGQLLHLNGIDTIVLERRTKEHVLSRIRAGILEQGLVELMHKAGVGARLERESFRHHGTLISHN
DEMFGINFERLIGKSVTLYGQTEVTRDLYEARESVGATTFFDVEDATIHDADTESPYVTFQKDGKETRIDCDFIAGCDGF
HGVSRRTIPASVRTEYEKVYPFGWLGILSETPPVNEELIYANSEDGFALCSMRNANLSRYYVQCSLGDDVGDWTDTRFWD
TLRRRLPSEVAEALVTGPSIEKSIAPLRSFVSEPMRWGRLFLCGDAAHIVPPTGAKGLNTAASDVHYLYTGLIQYYEDKD
SEGIDRYSEKALARVWKAERFSWWMTSLLHRFPDQGPFDVKMQAAELAFLRDNKDAQRVLATNYVGLPY

Sequences:

>Translated_389_residues
MRTQVVIVGGGPSGMLLGQLLHLNGIDTIVLERRTKEHVLSRIRAGILEQGLVELMHKAGVGARLERESFRHHGTLISHN
DEMFGINFERLIGKSVTLYGQTEVTRDLYEARESVGATTFFDVEDATIHDADTESPYVTFQKDGKETRIDCDFIAGCDGF
HGVSRRTIPASVRTEYEKVYPFGWLGILSETPPVNEELIYANSEDGFALCSMRNANLSRYYVQCSLGDDVGDWTDTRFWD
TLRRRLPSEVAEALVTGPSIEKSIAPLRSFVSEPMRWGRLFLCGDAAHIVPPTGAKGLNTAASDVHYLYTGLIQYYEDKD
SEGIDRYSEKALARVWKAERFSWWMTSLLHRFPDQGPFDVKMQAAELAFLRDNKDAQRVLATNYVGLPY
>Mature_389_residues
MRTQVVIVGGGPSGMLLGQLLHLNGIDTIVLERRTKEHVLSRIRAGILEQGLVELMHKAGVGARLERESFRHHGTLISHN
DEMFGINFERLIGKSVTLYGQTEVTRDLYEARESVGATTFFDVEDATIHDADTESPYVTFQKDGKETRIDCDFIAGCDGF
HGVSRRTIPASVRTEYEKVYPFGWLGILSETPPVNEELIYANSEDGFALCSMRNANLSRYYVQCSLGDDVGDWTDTRFWD
TLRRRLPSEVAEALVTGPSIEKSIAPLRSFVSEPMRWGRLFLCGDAAHIVPPTGAKGLNTAASDVHYLYTGLIQYYEDKD
SEGIDRYSEKALARVWKAERFSWWMTSLLHRFPDQGPFDVKMQAAELAFLRDNKDAQRVLATNYVGLPY

Specific function: Unknown

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012733
- InterPro:   IPR002938
- InterPro:   IPR003042 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: =1.14.13.2 [H]

Molecular weight: Translated: 43817; Mature: 43817

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTQVVIVGGGPSGMLLGQLLHLNGIDTIVLERRTKEHVLSRIRAGILEQGLVELMHKAG
CCEEEEEEECCCCHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VGARLERESFRHHGTLISHNDEMFGINFERLIGKSVTLYGQTEVTRDLYEARESVGATTF
CCCCHHHHHHHHCCCEEECCCCEECCCHHHHHCCCEEEECCHHHHHHHHHHHHHCCCEEE
FDVEDATIHDADTESPYVTFQKDGKETRIDCDFIAGCDGFHGVSRRTIPASVRTEYEKVY
EECCCCEEECCCCCCCEEEEECCCCCCEECEEEEECCCCCCCCCCCCCCHHHHHHHHHHC
PFGWLGILSETPPVNEELIYANSEDGFALCSMRNANLSRYYVQCSLGDDVGDWTDTRFWD
CCCEEECCCCCCCCCCEEEEECCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCHHHHH
TLRRRLPSEVAEALVTGPSIEKSIAPLRSFVSEPMRWGRLFLCGDAAHIVPPTGAKGLNT
HHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCEEEEECCCCEECCCCCCCCCCH
AASDVHYLYTGLIQYYEDKDSEGIDRYSEKALARVWKAERFSWWMTSLLHRFPDQGPFDV
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
KMQAAELAFLRDNKDAQRVLATNYVGLPY
EEHHHHEEHHCCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRTQVVIVGGGPSGMLLGQLLHLNGIDTIVLERRTKEHVLSRIRAGILEQGLVELMHKAG
CCEEEEEEECCCCHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VGARLERESFRHHGTLISHNDEMFGINFERLIGKSVTLYGQTEVTRDLYEARESVGATTF
CCCCHHHHHHHHCCCEEECCCCEECCCHHHHHCCCEEEECCHHHHHHHHHHHHHCCCEEE
FDVEDATIHDADTESPYVTFQKDGKETRIDCDFIAGCDGFHGVSRRTIPASVRTEYEKVY
EECCCCEEECCCCCCCEEEEECCCCCCEECEEEEECCCCCCCCCCCCCCHHHHHHHHHHC
PFGWLGILSETPPVNEELIYANSEDGFALCSMRNANLSRYYVQCSLGDDVGDWTDTRFWD
CCCEEECCCCCCCCCCEEEEECCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCHHHHH
TLRRRLPSEVAEALVTGPSIEKSIAPLRSFVSEPMRWGRLFLCGDAAHIVPPTGAKGLNT
HHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCEEEEECCCCEECCCCCCCCCCH
AASDVHYLYTGLIQYYEDKDSEGIDRYSEKALARVWKAERFSWWMTSLLHRFPDQGPFDV
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
KMQAAELAFLRDNKDAQRVLATNYVGLPY
EEHHHHEEHHCCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2465205; 10984043; 7939628; 8555229; 8312276 [H]