Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080365

Identifier: 99080365

GI number: 99080365

Start: 550031

End: 551305

Strand: Reverse

Name: 99080365

Synonym: TM1040_0524

Alternate gene names: NA

Gene position: 551305-550031 (Counterclockwise)

Preceding gene: 99080366

Following gene: 99080364

Centisome position: 17.22

GC content: 63.14

Gene sequence:

>1275_bases
GTGACCCAATCGCCCGCGCAAAATGGCCTCGCCGCCTATATGGCGGTGACCGCAGCCTATTGGGCCTTCATGCTCACGGA
TGGCGCGCTGCGCATGTTGGTGCTGTTGCACTTTCACACGCTGGGCTTCAGCCCGGTGCAGCTGGCCTATCTCTTTATAC
TCTACGAGATCGCGGGCATGGTCACCAACCTCTCGGCGGGCTGGATTGCTGCGCGTTTCGGGTTGACGACCACACTTTAT
GCGGGGCTTGCGCTGCAAGTGGTGGCGCTGCTTGCATTGACGCAGCTTGATCCCGGCTGGCAGATCGCCACGTCGGTTGC
CTTTGTGATGGGAGTTCAGGGCCTGTCGGGTGTGGCGAAGGATCTGGCCAAGATGGCGTCCAAATCTGCCGTGAAACTGC
TCGCCCCCAAAGAAGGCGACGGGCTGTTTCGCTGGGTTGCGGTGCTGACAGGGTCCAAGAACGCGGTCAAAGGGCTGGGC
TTTGGGCTGGGCGCGGTGCTTCTGGCGCTTGCCGGGTTCACATGGGCCACGCTCGGAATGGCGCTGATCCTGGCCGCGAT
CCTGATTGCGGTTCTGATCGCGATGCCAAAGGGGCTGCCGACGGGACGCAAAGGCGCGAAATTTTCCGAGGTCTTCTCCA
AGTCCGCCAACATCAACTGGCTCTCGGCGGCACGGGTGTTTCTCTTCGGGGCGCGCGATGTGTGGTTCGTGGTCGGCATT
CCGGTCTACTTCTACGCCGTCATCTCGGACGGCACCGAGGCCAGCAACCGCGCGGCGTTCTTCATGATCGGCAGCTTCAT
GGCAGTCTGGATCATCTGCTACGGGGCGGTGCAAGCGGCGGCGCCGCGCATCCTACGGGCCTCGAGCCGCTCTGAGGCAG
AGCTGATTTCCGCCGCGCGGCACTGGGCGAGCCTGCTGGCGTTGGTTCCGGCGGCGCTGACCGTGGCCGTGGTGATGTCT
GGCGCGCCCGCGCCTTGGCTCACGGCAACACTGGTCATCGGCCTCTTGCTGTTTGGGGCGCTCTTTGCGGTGAACTCCTC
CCTGCATTCCTACCTGATCCTTGCCTTCTCCAAGGACGAGCGGGTCACGATGGATGTGGGCTTTTACTACATGGCCAATG
CGGGTGGGCGGCTCCTGGGCACGTTGCTTTCTGGTCTCACCTATCAACTGGGCGGGGTCGCGGCCTGCCTTGGCACCGCA
GCCCTGATGATCGCACTTAGCGCATTGGCTGCAGGGCGCCTCTCTGCCCCTACATCTGAAAGAGCCACGGCATGA

Upstream 100 bases:

>100_bases
TCGTGAACGGAACGCAGGTGAAGATCTATGCGTGGTACGACAATGAGATGGGCTATGCGCATCGTCTGGTGGACGTGGCG
ATGATGGTGGGTGAGAGCCT

Downstream 100 bases:

>100_bases
GCATCTTCGAGAAATACCTGAGCCTCTGGGTGGCATTGGCGATGACGGCCGGCATTGCGCTTGGCAGTCTGGCCCCCGGC
GTGATGGAGGCCATCGCCGC

Product: major facilitator transporter

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Permease; Facilitator Superfamily Multidrug-Efflux Transporter; Membrane Transporter; Facilitator Superfamily Transporter; Multidrug Efflux Transporter MFS Family; Multidrug-Efflux Transporter; Nonfunctional Facilitator Superfamily Protein; MFS Transporter; Permease Of Facilitator Superfamily; Nitric Oxide Reductase Cytochrome B Subunit

Number of amino acids: Translated: 424; Mature: 423

Protein sequence:

>424_residues
MTQSPAQNGLAAYMAVTAAYWAFMLTDGALRMLVLLHFHTLGFSPVQLAYLFILYEIAGMVTNLSAGWIAARFGLTTTLY
AGLALQVVALLALTQLDPGWQIATSVAFVMGVQGLSGVAKDLAKMASKSAVKLLAPKEGDGLFRWVAVLTGSKNAVKGLG
FGLGAVLLALAGFTWATLGMALILAAILIAVLIAMPKGLPTGRKGAKFSEVFSKSANINWLSAARVFLFGARDVWFVVGI
PVYFYAVISDGTEASNRAAFFMIGSFMAVWIICYGAVQAAAPRILRASSRSEAELISAARHWASLLALVPAALTVAVVMS
GAPAPWLTATLVIGLLLFGALFAVNSSLHSYLILAFSKDERVTMDVGFYYMANAGGRLLGTLLSGLTYQLGGVAACLGTA
ALMIALSALAAGRLSAPTSERATA

Sequences:

>Translated_424_residues
MTQSPAQNGLAAYMAVTAAYWAFMLTDGALRMLVLLHFHTLGFSPVQLAYLFILYEIAGMVTNLSAGWIAARFGLTTTLY
AGLALQVVALLALTQLDPGWQIATSVAFVMGVQGLSGVAKDLAKMASKSAVKLLAPKEGDGLFRWVAVLTGSKNAVKGLG
FGLGAVLLALAGFTWATLGMALILAAILIAVLIAMPKGLPTGRKGAKFSEVFSKSANINWLSAARVFLFGARDVWFVVGI
PVYFYAVISDGTEASNRAAFFMIGSFMAVWIICYGAVQAAAPRILRASSRSEAELISAARHWASLLALVPAALTVAVVMS
GAPAPWLTATLVIGLLLFGALFAVNSSLHSYLILAFSKDERVTMDVGFYYMANAGGRLLGTLLSGLTYQLGGVAACLGTA
ALMIALSALAAGRLSAPTSERATA
>Mature_423_residues
TQSPAQNGLAAYMAVTAAYWAFMLTDGALRMLVLLHFHTLGFSPVQLAYLFILYEIAGMVTNLSAGWIAARFGLTTTLYA
GLALQVVALLALTQLDPGWQIATSVAFVMGVQGLSGVAKDLAKMASKSAVKLLAPKEGDGLFRWVAVLTGSKNAVKGLGF
GLGAVLLALAGFTWATLGMALILAAILIAVLIAMPKGLPTGRKGAKFSEVFSKSANINWLSAARVFLFGARDVWFVVGIP
VYFYAVISDGTEASNRAAFFMIGSFMAVWIICYGAVQAAAPRILRASSRSEAELISAARHWASLLALVPAALTVAVVMSG
APAPWLTATLVIGLLLFGALFAVNSSLHSYLILAFSKDERVTMDVGFYYMANAGGRLLGTLLSGLTYQLGGVAACLGTAA
LMIALSALAAGRLSAPTSERATA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44335; Mature: 44204

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCC
>Mature Secondary Structure 
TQSPAQNGLAAYMAVTAAYWAFMLTDGALRMLVLLHFHTLGFSPVQLAYLFILYEIAGM
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
VTNLSAGWIAARFGLTTTLYAGLALQVVALLALTQLDPGWQIATSVAFVMGVQGLSGVAK
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
DLAKMASKSAVKLLAPKEGDGLFRWVAVLTGSKNAVKGLGFGLGAVLLALAGFTWATLGM
HHHHHHHHCCEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALILAAILIAVLIAMPKGLPTGRKGAKFSEVFSKSANINWLSAARVFLFGARDVWFVVGI
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHH
PVYFYAVISDGTEASNRAAFFMIGSFMAVWIICYGAVQAAAPRILRASSRSEAELISAAR
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
HWASLLALVPAALTVAVVMSGAPAPWLTATLVIGLLLFGALFAVNSSLHSYLILAFSKDE
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCC
RVTMDVGFYYMANAGGRLLGTLLSGLTYQLGGVAACLGTAALMIALSALAAGRLSAPTSE
EEEEEECEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
RATA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA