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The map label for this gene is yufP [H]

Identifier: 99080336

GI number: 99080336

Start: 517706

End: 518788

Strand: Reverse

Name: yufP [H]

Synonym: TM1040_0495

Alternate gene names: 99080336

Gene position: 518788-517706 (Counterclockwise)

Preceding gene: 99080337

Following gene: 99080335

Centisome position: 16.21

GC content: 59.19

Gene sequence:

>1083_bases
ATGATCCGGCTAGAGAAACGACCGCAGCCATCGCGGGTGTGGTCCATGGCGACACCGCTGCTGGCGGTGCTTGCGACAAT
GGTGATGGGAGGGCTGTTGTTCGCGACCCTCGGCAAAAACCCCGTCGAGGCAATCCGAACGATCTTTTGGGAGCCACTGT
TTGGCGAGTTCGCCTTTTATTATCGCCCGCAGCTTCTGGTTAAGGGCGCTCCGCTGGTTCTGATCGCAATCGGACTGAGC
CTTGGGTTTCGTGCGGGGATCTGGAACATTGGCGCCGAAGGGCAATACATCATCGGTGCTTTGACCGGCGCAGGTGTGGG
GTTGGCGTTCTATCCCACGGACTCCTGGGTGATCTTTCCGCTGATGGTTCTGGCGGGTGCCTTAGGGGGCTGGGCCTGGG
CGATGATTCCAGCGGTGCTCAAAACCCGTTTTGGCACCAATGAAATCCTCGTATCCTTGATGCTGGTCTATGTGGCCGAG
CAGTTGCTTGCATCCATGTCGCTGGGGTTGATGAAAAACCCCGAAGGCTTTGGCTTTCCGGGATCGCGCAACCTGCAACA
ATACGAGAGCGCCCACAACGCTGAACTGATTGCCGGAACCGGCATGCACTGGGGTGTTGTCGCGGCGATGATTGCGGTGA
TTTTCTCCTACGTGCTGCTGAACCGGCATATGCTCGGATATCACATCCGCCTGACCGGCGAAGCACCGCGGGCGGCCCGG
TTTGCAGGCGTTAAACCCGCCCGGCTGGTTCTGTTTTGCCTTGGGATGTCTGGCGCTCTGGCAGGGCTTGCAGGCATGTT
CGAGGTCTCTGGGCCTTCGGGCCAGGTCTCCATCGATTTCAACGTGGGCTACGGGTTTACCGCGATCATCGTGGCCTTTC
TGGGGCGCCTGCATCCGGTGGGTATCCTGCTGGCAGGCGCCTTGATGGCGTTGACATACATTGGCGGCGACATTGCGCAG
GGCAATCTCGGCCTGCCTTCGTCGGCCATTCAGGTTTTTCAGGGCATGCTGTTGTTCTTCTTGCTGGCGCTTGATCTGCT
CACCAACTACCGCATCGCAATTGGCAAGCCGGAGGCGCTCTGA

Upstream 100 bases:

>100_bases
TTGGGGAAGTGACGCTCGGGGCGGAAGCCTCCGGCGGGGATATTTGGAAGAAGATGAAAAGAACCGGAACACAAAGATCC
GGCCAAGAGGGACAAGAGGG

Downstream 100 bases:

>100_bases
TGGATCTGTCTGCTATCAATCCAGTCCTTCTCATCGCCTCTCTGATGGTGGCGGCGACCCCGTTGCTGCTGGCCGCTATC
GGCGAGCTGGTGGTGGAGAA

Product: inner-membrane translocator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MIRLEKRPQPSRVWSMATPLLAVLATMVMGGLLFATLGKNPVEAIRTIFWEPLFGEFAFYYRPQLLVKGAPLVLIAIGLS
LGFRAGIWNIGAEGQYIIGALTGAGVGLAFYPTDSWVIFPLMVLAGALGGWAWAMIPAVLKTRFGTNEILVSLMLVYVAE
QLLASMSLGLMKNPEGFGFPGSRNLQQYESAHNAELIAGTGMHWGVVAAMIAVIFSYVLLNRHMLGYHIRLTGEAPRAAR
FAGVKPARLVLFCLGMSGALAGLAGMFEVSGPSGQVSIDFNVGYGFTAIIVAFLGRLHPVGILLAGALMALTYIGGDIAQ
GNLGLPSSAIQVFQGMLLFFLLALDLLTNYRIAIGKPEAL

Sequences:

>Translated_360_residues
MIRLEKRPQPSRVWSMATPLLAVLATMVMGGLLFATLGKNPVEAIRTIFWEPLFGEFAFYYRPQLLVKGAPLVLIAIGLS
LGFRAGIWNIGAEGQYIIGALTGAGVGLAFYPTDSWVIFPLMVLAGALGGWAWAMIPAVLKTRFGTNEILVSLMLVYVAE
QLLASMSLGLMKNPEGFGFPGSRNLQQYESAHNAELIAGTGMHWGVVAAMIAVIFSYVLLNRHMLGYHIRLTGEAPRAAR
FAGVKPARLVLFCLGMSGALAGLAGMFEVSGPSGQVSIDFNVGYGFTAIIVAFLGRLHPVGILLAGALMALTYIGGDIAQ
GNLGLPSSAIQVFQGMLLFFLLALDLLTNYRIAIGKPEAL
>Mature_360_residues
MIRLEKRPQPSRVWSMATPLLAVLATMVMGGLLFATLGKNPVEAIRTIFWEPLFGEFAFYYRPQLLVKGAPLVLIAIGLS
LGFRAGIWNIGAEGQYIIGALTGAGVGLAFYPTDSWVIFPLMVLAGALGGWAWAMIPAVLKTRFGTNEILVSLMLVYVAE
QLLASMSLGLMKNPEGFGFPGSRNLQQYESAHNAELIAGTGMHWGVVAAMIAVIFSYVLLNRHMLGYHIRLTGEAPRAAR
FAGVKPARLVLFCLGMSGALAGLAGMFEVSGPSGQVSIDFNVGYGFTAIIVAFLGRLHPVGILLAGALMALTYIGGDIAQ
GNLGLPSSAIQVFQGMLLFFLLALDLLTNYRIAIGKPEAL

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4603

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851
- InterPro:   IPR002229 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 38465; Mature: 38465

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRLEKRPQPSRVWSMATPLLAVLATMVMGGLLFATLGKNPVEAIRTIFWEPLFGEFAFY
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHH
YRPQLLVKGAPLVLIAIGLSLGFRAGIWNIGAEGQYIIGALTGAGVGLAFYPTDSWVIFP
HCCCCEECCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEECCCCHHHHH
LMVLAGALGGWAWAMIPAVLKTRFGTNEILVSLMLVYVAEQLLASMSLGLMKNPEGFGFP
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
GSRNLQQYESAHNAELIAGTGMHWGVVAAMIAVIFSYVLLNRHMLGYHIRLTGEAPRAAR
CCCCHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCHHEEEEEEEECCCCCHHH
FAGVKPARLVLFCLGMSGALAGLAGMFEVSGPSGQVSIDFNVGYGFTAIIVAFLGRLHPV
HCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHH
GILLAGALMALTYIGGDIAQGNLGLPSSAIQVFQGMLLFFLLALDLLTNYRIAIGKPEAL
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCC
>Mature Secondary Structure
MIRLEKRPQPSRVWSMATPLLAVLATMVMGGLLFATLGKNPVEAIRTIFWEPLFGEFAFY
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHH
YRPQLLVKGAPLVLIAIGLSLGFRAGIWNIGAEGQYIIGALTGAGVGLAFYPTDSWVIFP
HCCCCEECCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEECCCCHHHHH
LMVLAGALGGWAWAMIPAVLKTRFGTNEILVSLMLVYVAEQLLASMSLGLMKNPEGFGFP
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
GSRNLQQYESAHNAELIAGTGMHWGVVAAMIAVIFSYVLLNRHMLGYHIRLTGEAPRAAR
CCCCHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCHHEEEEEEEECCCCCHHH
FAGVKPARLVLFCLGMSGALAGLAGMFEVSGPSGQVSIDFNVGYGFTAIIVAFLGRLHPV
HCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHH
GILLAGALMALTYIGGDIAQGNLGLPSSAIQVFQGMLLFFLLALDLLTNYRIAIGKPEAL
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]