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The map label for this gene is xapR [C]

Identifier: 99080309

GI number: 99080309

Start: 486728

End: 487573

Strand: Direct

Name: xapR [C]

Synonym: TM1040_0468

Alternate gene names: 99080309

Gene position: 486728-487573 (Clockwise)

Preceding gene: 99080306

Following gene: 99080316

Centisome position: 15.21

GC content: 64.89

Gene sequence:

>846_bases
GTGGATACGAGATTCGTAGCGAGCTTGCTGGCCATAATCGAGGAGGGCTCGATCGCGGCTGCGGCGCGGCGCAGCGGGGT
GACGGCCTCGGCGCTGTCGCAGCGGATCTCTGCACTTGAGGCTGAACTGGGCGTCACGCTTTTGCGGCGCGAGGGGCGAA
TGGTGCAGCCCACGCATGCCTGTCGCAGCGTGCTGCCCCGGCTGCGGGCGATGCTTCGGCTGGAACAGGACTTGCGCGCG
GACTTGCGGGGTCAGAGGCTGGCAGGGCCCTTGCGGGTGGGGGCGATCTCTACCGCGCTTGGGGACTGGGCGGCGCAGCT
TTTGCGGCATCTGCATCACGCGGCTCCCGATGTGGATCTGCGGTTTGTTCCCGGGACCTCGCCGGGTTTGATGGCTCTTC
TGGAGGCAGAAGAAATCGATTTGGCGCTGGTGGTGGAGCCGCCTTTGTCGCTGCCAAAATCCCTGCGGTTCCAGCAGATG
TTTCAAGAGCCCGTTGGGTTGTTACGCCCAGCTTTGGATAGCGCCAGCACCTTGCCTTATCTGGTCTATTCGCGTGAAGC
CTGGGGCGGGGCGATCTGTTGGTCGGCCTTGACTGCGCGCGAGCCAAACCCGTCTGTCTTGGTGGAAATGGATGCGCTCG
AAGCGCTGGCGCAGATGGTCGAGGATGGTGTCGGTCAAGCGGTGCTGCCAGCGTGGCGCAGTCTGGCGCGCCATGCGCCC
GCAGCCCGGTTCACCGCGTGGCCTGGTGTTTATCGTAGCATTGGCCTGCTGCACCGTCTGCGCGATCAGGACAGCCCGTT
TCTGACATTGGTGCGCGAGGGGATCGGGCAGGAAGGCGGCCCTTAG

Upstream 100 bases:

>100_bases
GCGGCGTCTCCTGCGTCTTGAGTGCGGGTCATGTTACCCATAGCGCTCCCGGACATGCACATGCTAGCTTGTTTTTGGAT
CTTCAATCGTAAGGAAAACT

Downstream 100 bases:

>100_bases
CGCGGGCGATGGACGTTGGCGCTCTGGACAATCCCGAATGCAGCGAGGAGCACCAGCATGGCCGAGCCGCCATAGGAGAC
CAGTGGCAAGGGCACGCCGA

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator LysR Family; Transcriptional Regulator; LysR Family Regulatory Helix-Turn-Helix Protein; LysR Family Regulatory Protein; Transcriptional Regulator LysR Family Protein; Transcriptional Regulator LysR-Family; Transcriptional Regulators LysR Family; Transcriptional Regulator LysR; LysR-Family Transcriptional Regulator

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MDTRFVASLLAIIEEGSIAAAARRSGVTASALSQRISALEAELGVTLLRREGRMVQPTHACRSVLPRLRAMLRLEQDLRA
DLRGQRLAGPLRVGAISTALGDWAAQLLRHLHHAAPDVDLRFVPGTSPGLMALLEAEEIDLALVVEPPLSLPKSLRFQQM
FQEPVGLLRPALDSASTLPYLVYSREAWGGAICWSALTAREPNPSVLVEMDALEALAQMVEDGVGQAVLPAWRSLARHAP
AARFTAWPGVYRSIGLLHRLRDQDSPFLTLVREGIGQEGGP

Sequences:

>Translated_281_residues
MDTRFVASLLAIIEEGSIAAAARRSGVTASALSQRISALEAELGVTLLRREGRMVQPTHACRSVLPRLRAMLRLEQDLRA
DLRGQRLAGPLRVGAISTALGDWAAQLLRHLHHAAPDVDLRFVPGTSPGLMALLEAEEIDLALVVEPPLSLPKSLRFQQM
FQEPVGLLRPALDSASTLPYLVYSREAWGGAICWSALTAREPNPSVLVEMDALEALAQMVEDGVGQAVLPAWRSLARHAP
AARFTAWPGVYRSIGLLHRLRDQDSPFLTLVREGIGQEGGP
>Mature_281_residues
MDTRFVASLLAIIEEGSIAAAARRSGVTASALSQRISALEAELGVTLLRREGRMVQPTHACRSVLPRLRAMLRLEQDLRA
DLRGQRLAGPLRVGAISTALGDWAAQLLRHLHHAAPDVDLRFVPGTSPGLMALLEAEEIDLALVVEPPLSLPKSLRFQQM
FQEPVGLLRPALDSASTLPYLVYSREAWGGAICWSALTAREPNPSVLVEMDALEALAQMVEDGVGQAVLPAWRSLARHAP
AARFTAWPGVYRSIGLLHRLRDQDSPFLTLVREGIGQEGGP

Specific function: Positive Regulator Required For The Expression Of Xapa And Xapb. Binds To The Inducer Xanthosine. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30490; Mature: 30490

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTRFVASLLAIIEEGSIAAAARRSGVTASALSQRISALEAELGVTLLRREGRMVQPTHA
CCHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
CRSVLPRLRAMLRLEQDLRADLRGQRLAGPLRVGAISTALGDWAAQLLRHLHHAAPDVDL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
RFVPGTSPGLMALLEAEEIDLALVVEPPLSLPKSLRFQQMFQEPVGLLRPALDSASTLPY
EECCCCCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
LVYSREAWGGAICWSALTAREPNPSVLVEMDALEALAQMVEDGVGQAVLPAWRSLARHAP
EEEECCCCCHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
AARFTAWPGVYRSIGLLHRLRDQDSPFLTLVREGIGQEGGP
CHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDTRFVASLLAIIEEGSIAAAARRSGVTASALSQRISALEAELGVTLLRREGRMVQPTHA
CCHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
CRSVLPRLRAMLRLEQDLRADLRGQRLAGPLRVGAISTALGDWAAQLLRHLHHAAPDVDL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
RFVPGTSPGLMALLEAEEIDLALVVEPPLSLPKSLRFQQMFQEPVGLLRPALDSASTLPY
EECCCCCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
LVYSREAWGGAICWSALTAREPNPSVLVEMDALEALAQMVEDGVGQAVLPAWRSLARHAP
EEEECCCCCHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
AARFTAWPGVYRSIGLLHRLRDQDSPFLTLVREGIGQEGGP
CHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA