Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is ureA [H]

Identifier: 99080228

GI number: 99080228

Start: 395402

End: 395704

Strand: Reverse

Name: ureA [H]

Synonym: TM1040_0387

Alternate gene names: 99080228

Gene position: 395704-395402 (Counterclockwise)

Preceding gene: 99080229

Following gene: 99080227

Centisome position: 12.36

GC content: 61.72

Gene sequence:

>303_bases
ATGAATCTGACACCGAGAGAAAAAGACAAGCTTCTGGTCGCGATGGCGGCCGAAGTCGCCCGCAAGCGACTGGCGCGCGG
GGTGAAACTCAATCATCCAGAGGCAATCGCGCTCATTACCGATGCCGTGGTCGAGGGGGCGCGCGACGGCAGATCGGTAG
CGGAGATGATGCAGGCGGGGGCCGAGGTCATCACCCGCGATCAATGCATGAGCGGCGTGGCCGAGATGATCCACGAAGTG
CAGGTCGAGGCCACTTTTCCCGACGGCACCAAGCTCGTGACCGTACACAACCCCATCCGTTGA

Upstream 100 bases:

>100_bases
TTTTGTCTTACGCCAGAGCCTCTTGCCCATTCTTGACAAGCTCACCGAGGGCAGCCTGCCCCGATGCTGGAGACTTTGAG
ACCATGAAAGCGACAGGCGC

Downstream 100 bases:

>100_bases
CAGCTCAAACCGGAGATCTTGCCCCATGAAACACCTGCTCGCTCTCGCGCCTGCCTTCGCGCTCACCGCTGGTCCGGCCC
TCGCTCATGGTGGGGCGCAT

Product: urease subunit gamma

Products: NA

Alternate protein names: Urea amidohydrolase subunit gamma [H]

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MNLTPREKDKLLVAMAAEVARKRLARGVKLNHPEAIALITDAVVEGARDGRSVAEMMQAGAEVITRDQCMSGVAEMIHEV
QVEATFPDGTKLVTVHNPIR

Sequences:

>Translated_100_residues
MNLTPREKDKLLVAMAAEVARKRLARGVKLNHPEAIALITDAVVEGARDGRSVAEMMQAGAEVITRDQCMSGVAEMIHEV
QVEATFPDGTKLVTVHNPIR
>Mature_100_residues
MNLTPREKDKLLVAMAAEVARKRLARGVKLNHPEAIALITDAVVEGARDGRSVAEMMQAGAEVITRDQCMSGVAEMIHEV
QVEATFPDGTKLVTVHNPIR

Specific function: Unknown

COG id: COG0831

COG function: function code E; Urea amidohydrolase (urease) gamma subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the urease gamma subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002026
- InterPro:   IPR012010
- ProDom:   PD002319 [H]

Pfam domain/function: PF00547 Urease_gamma [H]

EC number: =3.5.1.5 [H]

Molecular weight: Translated: 10876; Mature: 10876

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLTPREKDKLLVAMAAEVARKRLARGVKLNHPEAIALITDAVVEGARDGRSVAEMMQAG
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH
AEVITRDQCMSGVAEMIHEVQVEATFPDGTKLVTVHNPIR
HHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCC
>Mature Secondary Structure
MNLTPREKDKLLVAMAAEVARKRLARGVKLNHPEAIALITDAVVEGARDGRSVAEMMQAG
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH
AEVITRDQCMSGVAEMIHEVQVEATFPDGTKLVTVHNPIR
HHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA