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The map label for this gene is ureB

Identifier: 99080227

GI number: 99080227

Start: 394907

End: 395212

Strand: Reverse

Name: ureB

Synonym: TM1040_0386

Alternate gene names: 99080227

Gene position: 395212-394907 (Counterclockwise)

Preceding gene: 99080228

Following gene: 99080226

Centisome position: 12.35

GC content: 64.05

Gene sequence:

>306_bases
ATGATCCCAGGAGAGCTGATGCCCGCCGCAGGTGATCTGACCCTGAATGAGGGCGCCGAGGCCCTCACACTGATGGTTGC
AAACACCGGCGACCGCCCGGTGCAGGTGGGCAGCCACTACCATTTCGCCGAAGCGAACCCTGCGCTCGACTTTGACCGTG
AGGCCGCTAGGGGCCTACGTCTCGACATTGCCGCCGGAACCGCCGTGCGGTTTGAACCCGGCCAACGCCGTGAGGTGCCG
CTGATCCCCATCGGCGGGGCACGCAGGATTTTTGGGTTCAACGCCGAAATCATGGGGGATCTGTGA

Upstream 100 bases:

>100_bases
GTGGGGCGCATGTGCATCCACACGGGGCCGAGGTCTGGATTGCCCTCATCCTTGCTGCCGCCGTGGTCGGTGGCACCATT
TCGTGGTTTCGGAGTCGCAA

Downstream 100 bases:

>100_bases
TGCGCCACCAACCGTCTGCAGCTTTCAGGCGCAAGTACGCCGCGGCCTGTCTTTCGCCTTCTAAACGTCTCGTCTGAGAT
TTTCGACCGTCTCCTCCGAT

Product: urease, beta subunit

Products: NA

Alternate protein names: Urea amidohydrolase subunit beta

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MIPGELMPAAGDLTLNEGAEALTLMVANTGDRPVQVGSHYHFAEANPALDFDREAARGLRLDIAAGTAVRFEPGQRREVP
LIPIGGARRIFGFNAEIMGDL

Sequences:

>Translated_101_residues
MIPGELMPAAGDLTLNEGAEALTLMVANTGDRPVQVGSHYHFAEANPALDFDREAARGLRLDIAAGTAVRFEPGQRREVP
LIPIGGARRIFGFNAEIMGDL
>Mature_101_residues
MIPGELMPAAGDLTLNEGAEALTLMVANTGDRPVQVGSHYHFAEANPALDFDREAARGLRLDIAAGTAVRFEPGQRREVP
LIPIGGARRIFGFNAEIMGDL

Specific function: Unknown

COG id: COG0832

COG function: function code E; Urea amidohydrolase (urease) beta subunit

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the urease beta subunit family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): URE2_SILST (Q1GJP7)

Other databases:

- EMBL:   CP000377
- RefSeq:   YP_612381.1
- ProteinModelPortal:   Q1GJP7
- SMR:   Q1GJP7
- STRING:   Q1GJP7
- GeneID:   4078619
- GenomeReviews:   CP000377_GR
- KEGG:   sit:TM1040_0386
- NMPDR:   fig|292414.1.peg.2439
- eggNOG:   COG0832
- HOGENOM:   HBG365918
- OMA:   RIVYGFN
- ProtClustDB:   CLSK762115
- BioCyc:   SSP292414:TM1040_0386-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01954
- InterPro:   IPR002019
- Gene3D:   G3DSA:2.10.150.10
- TIGRFAMs:   TIGR00192

Pfam domain/function: PF00699 Urease_beta; SSF51278 Urease_beta

EC number: =3.5.1.5

Molecular weight: Translated: 10786; Mature: 10786

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPGELMPAAGDLTLNEGAEALTLMVANTGDRPVQVGSHYHFAEANPALDFDREAARGLR
CCCCCCCCCCCCEEECCCCCEEEEEEECCCCCCEEECCEEEECCCCCCCCCCCHHHCCEE
LDIAAGTAVRFEPGQRREVPLIPIGGARRIFGFNAEIMGDL
EEEECCCEEEECCCCCCCCCEEECCCCCEEEECCCEEEECC
>Mature Secondary Structure
MIPGELMPAAGDLTLNEGAEALTLMVANTGDRPVQVGSHYHFAEANPALDFDREAARGLR
CCCCCCCCCCCCEEECCCCCEEEEEEECCCCCCEEECCEEEECCCCCCCCCCCHHHCCEE
LDIAAGTAVRFEPGQRREVPLIPIGGARRIFGFNAEIMGDL
EEEECCCEEEECCCCCCCCCEEECCCCCEEEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA