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The map label for this gene is iclR [C]

Identifier: 99080203

GI number: 99080203

Start: 371829

End: 372626

Strand: Direct

Name: iclR [C]

Synonym: TM1040_0362

Alternate gene names: 99080203

Gene position: 371829-372626 (Clockwise)

Preceding gene: 99080202

Following gene: 99080204

Centisome position: 11.62

GC content: 61.53

Gene sequence:

>798_bases
ATGATGCGTGATCTTGAGCAGGATCGCCGATACGCCAACACTCTGGCGCGTGGGCTGAAGATATTGCGCGCGTTTCGTCC
GTCCGACAACGGCTTGGGCAATCTCGAAATCTCTGAGCGCACCGGTATTCCGCGCTCCACCGTCTCCCGGTTGACGTTCA
CGCTCTGTGCCTTGGGCTATCTCACGCATGGGCGTCACTTTGACAAATACCGGCTTGGGCCTGCGGCGCTCGCGCTTGGC
AATATCGCGTCTGCAGCGTTTGGGTTTGTGACGGTGGCCGCACCGATCATGCAGGAGCTTGCCAACAAGGTGAATGCCCT
CGTCGGAGTTGCGATTCAGGACGATGGCACCATGCTGATCGTAAAAACCTGGCGGCCCGAGGGGTCGGGAGCGATCTGGC
TCGATGTGGGCTATCGCATGCCGGTTCTGACCTCTTCATCGGGTGTGGCCTACCTTGGGGCGTTGACGCAGGAGGAGCGT
GAAAAGCTCGAGGCGCTTTTGCCCGAGGAGGGGGCCGAGATCTGCGAAGAGGTCTGGCAGCACCAGAGCGCGCAGCTGCG
GCGTGTGGGCTATGCCTGTGTGGCAGAGGATATGCGCTATTCTCGCGCGATCCATGCGGTCGCAACCCCGTTTCGCCCCT
CCGAAATCGGCGAACCGGTGTCGATCTTCTGCGGGGCCAATGTGGATGATCTGAGCACCGAACAGATGCATGTCGAGGTC
GGCCCCGAGCTTGTGAAGGCGGTCAACAGGCTGAAGCTGCTCACGGGGCACGCGGTTTCGGCCGTAGCGTCGGCCTGA

Upstream 100 bases:

>100_bases
AGACTATGGCAAAGGCGTTGAGGCAGCAGCAAAACTCTCTTTTCTTGACGCGAGAGAACTTTGTATGATGGTGCCTCCCG
GTGACGGTAAAGGACGAAAA

Downstream 100 bases:

>100_bases
GATTGACGTGCTTTCTGTTCTGTCGGGGTCACTGATTTCTGAGCGGATGCACCTTCAGGGCGCCTGCGCCTTGGTGGGAG
CGTGGCCAGCGACACGATCA

Product: IclR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator IclR Family; Transcriptional Regulator; Regulatory Protein IclR; IclR Family Regulatory Protein; IclR Family Transcriptional Regulator Family; Transcriptional Regulator Family Protein; Regulatory Proteins IclR; IclR Helix-Turn-Helix Domain-Containing; IclR Helix-Turn-Helix Domain Family; Pca Regulon Regulatory; Transcription Regulator Protein; Transcriptional Regulator Iclr Family Protein; AsnC Family Transcriptional Regulator; IclR Family Transcription Regulator Protein; Transcriptional Regulator Iclr Family; Transcriptional Regulator IclR Family Protein; Transcriptional Regulator IclR-Like Protein; IclR-Family Transcriptional Regulator; TRANSCRIPTIONal REGULATOR IclR Family; IclR-Family Transcriptional Regulator; Transciptional Regulator IclR Family; Transcriptional Regulator HTH IclR; Pca Regulon Regulatory Protein

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MMRDLEQDRRYANTLARGLKILRAFRPSDNGLGNLEISERTGIPRSTVSRLTFTLCALGYLTHGRHFDKYRLGPAALALG
NIASAAFGFVTVAAPIMQELANKVNALVGVAIQDDGTMLIVKTWRPEGSGAIWLDVGYRMPVLTSSSGVAYLGALTQEER
EKLEALLPEEGAEICEEVWQHQSAQLRRVGYACVAEDMRYSRAIHAVATPFRPSEIGEPVSIFCGANVDDLSTEQMHVEV
GPELVKAVNRLKLLTGHAVSAVASA

Sequences:

>Translated_265_residues
MMRDLEQDRRYANTLARGLKILRAFRPSDNGLGNLEISERTGIPRSTVSRLTFTLCALGYLTHGRHFDKYRLGPAALALG
NIASAAFGFVTVAAPIMQELANKVNALVGVAIQDDGTMLIVKTWRPEGSGAIWLDVGYRMPVLTSSSGVAYLGALTQEER
EKLEALLPEEGAEICEEVWQHQSAQLRRVGYACVAEDMRYSRAIHAVATPFRPSEIGEPVSIFCGANVDDLSTEQMHVEV
GPELVKAVNRLKLLTGHAVSAVASA
>Mature_265_residues
MMRDLEQDRRYANTLARGLKILRAFRPSDNGLGNLEISERTGIPRSTVSRLTFTLCALGYLTHGRHFDKYRLGPAALALG
NIASAAFGFVTVAAPIMQELANKVNALVGVAIQDDGTMLIVKTWRPEGSGAIWLDVGYRMPVLTSSSGVAYLGALTQEER
EKLEALLPEEGAEICEEVWQHQSAQLRRVGYACVAEDMRYSRAIHAVATPFRPSEIGEPVSIFCGANVDDLSTEQMHVEV
GPELVKAVNRLKLLTGHAVSAVASA

Specific function: Regulation Of The Glyoxylate Bypass Operon (ACEbak), Which Encodes Isocitrate Lyase, Malate Synthase As Well As Isocitrate Dehydrogenase Kinase/Phosphorylase. [C]

COG id: COG1414

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082359, Length=258, Percent_Identity=23.6434108527132, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28822; Mature: 28822

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRDLEQDRRYANTLARGLKILRAFRPSDNGLGNLEISERTGIPRSTVSRLTFTLCALGY
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHCCCCCHHHHHHHHHHHHHHHH
LTHGRHFDKYRLGPAALALGNIASAAFGFVTVAAPIMQELANKVNALVGVAIQDDGTMLI
HHCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEE
VKTWRPEGSGAIWLDVGYRMPVLTSSSGVAYLGALTQEEREKLEALLPEEGAEICEEVWQ
EEEECCCCCCEEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
HQSAQLRRVGYACVAEDMRYSRAIHAVATPFRPSEIGEPVSIFCGANVDDLSTEQMHVEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEECCCCCCCCCCCEEEEC
GPELVKAVNRLKLLTGHAVSAVASA
CHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMRDLEQDRRYANTLARGLKILRAFRPSDNGLGNLEISERTGIPRSTVSRLTFTLCALGY
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHCCCCCHHHHHHHHHHHHHHHH
LTHGRHFDKYRLGPAALALGNIASAAFGFVTVAAPIMQELANKVNALVGVAIQDDGTMLI
HHCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEE
VKTWRPEGSGAIWLDVGYRMPVLTSSSGVAYLGALTQEEREKLEALLPEEGAEICEEVWQ
EEEECCCCCCEEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
HQSAQLRRVGYACVAEDMRYSRAIHAVATPFRPSEIGEPVSIFCGANVDDLSTEQMHVEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEECCCCCCCCCCCEEEEC
GPELVKAVNRLKLLTGHAVSAVASA
CHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA