Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is bztA [H]

Identifier: 99080135

GI number: 99080135

Start: 300335

End: 301351

Strand: Direct

Name: bztA [H]

Synonym: TM1040_0294

Alternate gene names: 99080135

Gene position: 300335-301351 (Clockwise)

Preceding gene: 99080134

Following gene: 99080136

Centisome position: 9.38

GC content: 62.05

Gene sequence:

>1017_bases
ATGAACAATTCCGTATTCTTTGGCGCGCTGACCGTGGCCGGTCTCGCAGCCGGTGCAGCCGCAGCCGGCACGCTTGACGA
CGTCAAGGCACGCGACAAACTGAACTGCGGGGTCTCCACCGGTCTGGTCGGCTTTTCTGCGCCGAACGCGAACGGTGAGT
GGGAAGGCTTTGACATCGCGGTCTGCCGCGCTGTTGCTGCAGCCGTCCTGGGTGACCCGAGCAAGGTCGAATACGTGCCG
ACCACCGGCAAGACCCGCTTCACCGCACTGGCCTCCGGCGAGATCGACATGCTGGCCCGCAACACCACATGGACCTTCAG
CCGCGACGTTGACCTGAAGTTCGAATTCGTCGGCGTGAACTACTACGACGGTCAGGGCTTCATGGTCCCCAAAGAGCTGG
GCGTGTCCTCCGCCAAGGAGCTGGACGGCGCAACTGTCTGCATTCAGACCGGTACCACCACCGAACTGAACCTCGCGGAC
TTCTTCCGTGCCAACAACATCTCCTATGAGCCGGTTCCGATCGAGACCAACGCAGAAGCGCGCCAGCAGTATCTGGCCGG
TGCTTGCGACGTCTACACCACCGACGCATCCGGTCTGGCGGCAACCCGCGCGACCTTTGACGACGCAGCAAACCACGTGA
TTCTGCCGGAGATCATCTCCAAAGAGCCGCTCGGCCCGCTGGTCCGTCACGGTGACAACGAGTGGGGCGACGTTGTGCGC
TGGACTCTGAACGCAATGATCGCAGCTGAAGAGCTGGGCATCACCTCCGCAAACCTGGCTGAGAAAGCTGCAGGTACCGA
CAACCCGGAAATCAACCGTCTGCTCGGCACCGAAGGCACCCTCGGCGAGATGCTTGGCCTGGAAGCTGACTTTGCTCAAA
AAGCGCTGGCCGCTGGCGGCAACTACGGTGAGATCTTTGCCAAGACCATCGGCGAAGACACCCCGGTTGGCCTGGCGCGT
GGTCTGAACGCACAGTGGACCGATGGTGGCCTGCTCTACGCACCGCCGTTCCGTTAA

Upstream 100 bases:

>100_bases
CTCGAAAACGGGGCCAACCCCGTTTCAAACAGCCCGCACCGTGACGGGGTGGGTGATAAAGAACCACCAAACTCAGGTGG
ATAGTCAGGAAGAGGTAAAC

Downstream 100 bases:

>100_bases
TTAGCGAAACCGGAAAAGGGCGTGAGGTTCTCCTCGCGCCCTTCTTCCAAGTTAAAGAATAACGAAATCTGCGGCTGATC
CCGGAGTGAGGAAGAACCTC

Product: lysine-arginine-ornithine-binding periplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MNNSVFFGALTVAGLAAGAAAAGTLDDVKARDKLNCGVSTGLVGFSAPNANGEWEGFDIAVCRAVAAAVLGDPSKVEYVP
TTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFEFVGVNYYDGQGFMVPKELGVSSAKELDGATVCIQTGTTTELNLAD
FFRANNISYEPVPIETNAEARQQYLAGACDVYTTDASGLAATRATFDDAANHVILPEIISKEPLGPLVRHGDNEWGDVVR
WTLNAMIAAEELGITSANLAEKAAGTDNPEINRLLGTEGTLGEMLGLEADFAQKALAAGGNYGEIFAKTIGEDTPVGLAR
GLNAQWTDGGLLYAPPFR

Sequences:

>Translated_338_residues
MNNSVFFGALTVAGLAAGAAAAGTLDDVKARDKLNCGVSTGLVGFSAPNANGEWEGFDIAVCRAVAAAVLGDPSKVEYVP
TTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFEFVGVNYYDGQGFMVPKELGVSSAKELDGATVCIQTGTTTELNLAD
FFRANNISYEPVPIETNAEARQQYLAGACDVYTTDASGLAATRATFDDAANHVILPEIISKEPLGPLVRHGDNEWGDVVR
WTLNAMIAAEELGITSANLAEKAAGTDNPEINRLLGTEGTLGEMLGLEADFAQKALAAGGNYGEIFAKTIGEDTPVGLAR
GLNAQWTDGGLLYAPPFR
>Mature_338_residues
MNNSVFFGALTVAGLAAGAAAAGTLDDVKARDKLNCGVSTGLVGFSAPNANGEWEGFDIAVCRAVAAAVLGDPSKVEYVP
TTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFEFVGVNYYDGQGFMVPKELGVSSAKELDGATVCIQTGTTTELNLAD
FFRANNISYEPVPIETNAEARQQYLAGACDVYTTDASGLAATRATFDDAANHVILPEIISKEPLGPLVRHGDNEWGDVVR
WTLNAMIAAEELGITSANLAEKAAGTDNPEINRLLGTEGTLGEMLGLEADFAQKALAAGGNYGEIFAKTIGEDTPVGLAR
GLNAQWTDGGLLYAPPFR

Specific function: Part of a binding-protein-dependent transport system for glutamate, glutamine, aspartate and asparagine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005768
- InterPro:   IPR001638 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 35560; Mature: 35560

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNSVFFGALTVAGLAAGAAAAGTLDDVKARDKLNCGVSTGLVGFSAPNANGEWEGFDIA
CCCCEEEHHHHHHHHHHCHHHCCCHHHHHHHHHCCCCHHHCEEEEECCCCCCCCCCCHHH
VCRAVAAAVLGDPSKVEYVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFEFVGVN
HHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCEEEEEECCEEEEECCCCEEEEEEEEE
YYDGQGFMVPKELGVSSAKELDGATVCIQTGTTTELNLADFFRANNISYEPVPIETNAEA
EECCCCEECHHHHCCCCHHHCCCEEEEEECCCCCEEEHHHHHHHCCCCCCCEECCCCHHH
RQQYLAGACDVYTTDASGLAATRATFDDAANHVILPEIISKEPLGPLVRHGDNEWGDVVR
HHHHHHCCCEEEECCCCCCEEHHHHHHHCCCCEEEHHHHCCCCCCHHHHCCCCCHHHHHH
WTLNAMIAAEELGITSANLAEKAAGTDNPEINRLLGTEGTLGEMLGLEADFAQKALAAGG
HHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHCCCCCHHHHHCCCHHHHHHHHHCCC
NYGEIFAKTIGEDTPVGLARGLNAQWTDGGLLYAPPFR
CHHHHHHHHCCCCCCCHHHCCCCCCCCCCCEEECCCCC
>Mature Secondary Structure
MNNSVFFGALTVAGLAAGAAAAGTLDDVKARDKLNCGVSTGLVGFSAPNANGEWEGFDIA
CCCCEEEHHHHHHHHHHCHHHCCCHHHHHHHHHCCCCHHHCEEEEECCCCCCCCCCCHHH
VCRAVAAAVLGDPSKVEYVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFEFVGVN
HHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCEEEEEECCEEEEECCCCEEEEEEEEE
YYDGQGFMVPKELGVSSAKELDGATVCIQTGTTTELNLADFFRANNISYEPVPIETNAEA
EECCCCEECHHHHCCCCHHHCCCEEEEEECCCCCEEEHHHHHHHCCCCCCCEECCCCHHH
RQQYLAGACDVYTTDASGLAATRATFDDAANHVILPEIISKEPLGPLVRHGDNEWGDVVR
HHHHHHCCCEEEECCCCCCEEHHHHHHHCCCCEEEHHHHCCCCCCHHHHCCCCCHHHHHH
WTLNAMIAAEELGITSANLAEKAAGTDNPEINRLLGTEGTLGEMLGLEADFAQKALAAGG
HHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHCCCCCHHHHHCCCHHHHHHHHHCCC
NYGEIFAKTIGEDTPVGLARGLNAQWTDGGLLYAPPFR
CHHHHHHHHCCCCCCCHHHCCCCCCCCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8809753 [H]