Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is bztB [H]

Identifier: 99080136

GI number: 99080136

Start: 301493

End: 302761

Strand: Direct

Name: bztB [H]

Synonym: TM1040_0295

Alternate gene names: 99080136

Gene position: 301493-302761 (Clockwise)

Preceding gene: 99080135

Following gene: 99080137

Centisome position: 9.42

GC content: 57.29

Gene sequence:

>1269_bases
ATGTCGACTTTGACTGACCCGCCGAAAGAGACTTTTCGGCTGTCGATGCTGATTTACGACACCCGTTATCGCTCAGCCAC
CATTCAGGTTGTCGCGCTGATCGGGTTCTTGATCCTGGTTGGATCAATCATCAGCAATACCGCACAAAACCTAGCAGATC
TGGGTAAAGAGCCCAGTTTCAGATTCCTGTCAGAGCCTGCGGGCTATGACATCAACCAGCGCCTTCTGGATTATGACAAT
CAGGACAGCCACATGCGCGCGTCCCTGATGGGGCTGTTGAACACGCTGGTTGTGGCCGTTCTGGGCTGTATTACCGCAAC
CATTCTGGGTGTGATCATCGGTGTTCTGCGCCTGTCTTCGAACTGGCTTGTTGCCCGTTTGATGGCCGTTTACGTCGAGA
TGTTCCGCAACGTGCCGCTGCTCTTGTGGATCGTGTTCATCATGGCGATCCTGATCGAGACCCTGCCTGCGCCGCGGGCG
TTCCGGGGGGAAAACCCCGAAGCGACCATGAGCGTCTTTGACAGCGTTGCCGTCACCAACCGCGGTGTCTATGTCCCGGA
GCCGCTGTTCCATAACTCCCTTGGAAACATAGGTGTTTTTGGTGATTCAGCTGTTCGCTTTGACGTCTCGCTGGACCTGA
TCGCGTTGCTGGTCGTTCTGGGCGCGAGCCTTTATGTCTCCAAACGCATCCGCCTCTGGGCCGATCAGACACAGGAGAGC
ACGGGGCTTCGGCCAACCACCTGGCACATGCGCTCTGCCGTGGTTGTGCTGCCTTCGGCGTTGCTGCTGTTCGTGCTGGG
GTTCCATCTGGGCTATCCGGCGCTCAAGGGGTTCAACTTTGCGGGCGGCACTCACCTGCGGAACTCCCTGATCGCTTTGT
GGCTTGCGCTTTCGCTTTACACGGCTGCGTTTATCGCTGAAATCGTGCGCTCTGGTATCCTTGCGATCTCCAAGGGGCAG
ACAGAGGCGGCCGCCGCCCTTGGCCTGCGTCCCAAGCGTATCATGAACCTTGTGATCCTGCCGCAGGCGCTGCGCGTGAT
CATTCCGCCGCTGATCTCTAACTATCTGAACCTGACCAAGAACTCCTCGCTCGCGATCGCCGTGGGCTACATGGATCTGA
CCGGGACCTTGATGGGGATCACCATGAACCAGACCGGACGGGAGTTGGAAACCGTGCTTTTGGGCATGCTCGTGTACCTC
ACGATCAGCCTGCTGATTTCCAGCGTCATGAACTGGTACAACAATCGCGTCAAACTGGTGGAGCGGTAA

Upstream 100 bases:

>100_bases
TTCTTCCAAGTTAAAGAATAACGAAATCTGCGGCTGATCCCGGAGTGAGGAAGAACCTCACCGGGAGGATTGGAACCGCA
GGCCTCGGGGATCCCAACAT

Downstream 100 bases:

>100_bases
CATGAGTGACATTTCTTTTGTACGCACAGAGATGCTGCCGCCCAAAGAACCCCCTGCAAGCGAAGTGGGTGTGCTGGGCT
GGATGCGCGCAAACCTGTTC

Product: amino acid ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 421

Protein sequence:

>422_residues
MSTLTDPPKETFRLSMLIYDTRYRSATIQVVALIGFLILVGSIISNTAQNLADLGKEPSFRFLSEPAGYDINQRLLDYDN
QDSHMRASLMGLLNTLVVAVLGCITATILGVIIGVLRLSSNWLVARLMAVYVEMFRNVPLLLWIVFIMAILIETLPAPRA
FRGENPEATMSVFDSVAVTNRGVYVPEPLFHNSLGNIGVFGDSAVRFDVSLDLIALLVVLGASLYVSKRIRLWADQTQES
TGLRPTTWHMRSAVVVLPSALLLFVLGFHLGYPALKGFNFAGGTHLRNSLIALWLALSLYTAAFIAEIVRSGILAISKGQ
TEAAAALGLRPKRIMNLVILPQALRVIIPPLISNYLNLTKNSSLAIAVGYMDLTGTLMGITMNQTGRELETVLLGMLVYL
TISLLISSVMNWYNNRVKLVER

Sequences:

>Translated_422_residues
MSTLTDPPKETFRLSMLIYDTRYRSATIQVVALIGFLILVGSIISNTAQNLADLGKEPSFRFLSEPAGYDINQRLLDYDN
QDSHMRASLMGLLNTLVVAVLGCITATILGVIIGVLRLSSNWLVARLMAVYVEMFRNVPLLLWIVFIMAILIETLPAPRA
FRGENPEATMSVFDSVAVTNRGVYVPEPLFHNSLGNIGVFGDSAVRFDVSLDLIALLVVLGASLYVSKRIRLWADQTQES
TGLRPTTWHMRSAVVVLPSALLLFVLGFHLGYPALKGFNFAGGTHLRNSLIALWLALSLYTAAFIAEIVRSGILAISKGQ
TEAAAALGLRPKRIMNLVILPQALRVIIPPLISNYLNLTKNSSLAIAVGYMDLTGTLMGITMNQTGRELETVLLGMLVYL
TISLLISSVMNWYNNRVKLVER
>Mature_421_residues
STLTDPPKETFRLSMLIYDTRYRSATIQVVALIGFLILVGSIISNTAQNLADLGKEPSFRFLSEPAGYDINQRLLDYDNQ
DSHMRASLMGLLNTLVVAVLGCITATILGVIIGVLRLSSNWLVARLMAVYVEMFRNVPLLLWIVFIMAILIETLPAPRAF
RGENPEATMSVFDSVAVTNRGVYVPEPLFHNSLGNIGVFGDSAVRFDVSLDLIALLVVLGASLYVSKRIRLWADQTQEST
GLRPTTWHMRSAVVVLPSALLLFVLGFHLGYPALKGFNFAGGTHLRNSLIALWLALSLYTAAFIAEIVRSGILAISKGQT
EAAAALGLRPKRIMNLVILPQALRVIIPPLISNYLNLTKNSSLAIAVGYMDLTGTLMGITMNQTGRELETVLLGMLVYLT
ISLLISSVMNWYNNRVKLVER

Specific function: Part of a binding-protein-dependent transport system for glutamate, glutamine, aspartate and asparagine. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4597

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI48994930, Length=416, Percent_Identity=41.3461538461538, Blast_Score=276, Evalue=2e-75,
Organism=Escherichia coli, GI1786873, Length=182, Percent_Identity=32.967032967033, Blast_Score=83, Evalue=4e-17,
Organism=Escherichia coli, GI1788226, Length=128, Percent_Identity=37.5, Blast_Score=82, Evalue=6e-17,
Organism=Escherichia coli, GI1786874, Length=125, Percent_Identity=36, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI87082239, Length=138, Percent_Identity=34.0579710144928, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1787030, Length=120, Percent_Identity=36.6666666666667, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 46385; Mature: 46253

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLTDPPKETFRLSMLIYDTRYRSATIQVVALIGFLILVGSIISNTAQNLADLGKEPSF
CCCCCCCCHHHHEEEHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
RFLSEPAGYDINQRLLDYDNQDSHMRASLMGLLNTLVVAVLGCITATILGVIIGVLRLSS
HHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NWLVARLMAVYVEMFRNVPLLLWIVFIMAILIETLPAPRAFRGENPEATMSVFDSVAVTN
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCC
RGVYVPEPLFHNSLGNIGVFGDSAVRFDVSLDLIALLVVLGASLYVSKRIRLWADQTQES
CCCCCCCHHHHCCCCCCEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TGLRPTTWHMRSAVVVLPSALLLFVLGFHLGYPALKGFNFAGGTHLRNSLIALWLALSLY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHH
TAAFIAEIVRSGILAISKGQTEAAAALGLRPKRIMNLVILPQALRVIIPPLISNYLNLTK
HHHHHHHHHHCCCEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NSSLAIAVGYMDLTGTLMGITMNQTGRELETVLLGMLVYLTISLLISSVMNWYNNRVKLV
CCCEEEEEEEEHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
ER
CC
>Mature Secondary Structure 
STLTDPPKETFRLSMLIYDTRYRSATIQVVALIGFLILVGSIISNTAQNLADLGKEPSF
CCCCCCCHHHHEEEHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
RFLSEPAGYDINQRLLDYDNQDSHMRASLMGLLNTLVVAVLGCITATILGVIIGVLRLSS
HHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NWLVARLMAVYVEMFRNVPLLLWIVFIMAILIETLPAPRAFRGENPEATMSVFDSVAVTN
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCC
RGVYVPEPLFHNSLGNIGVFGDSAVRFDVSLDLIALLVVLGASLYVSKRIRLWADQTQES
CCCCCCCHHHHCCCCCCEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TGLRPTTWHMRSAVVVLPSALLLFVLGFHLGYPALKGFNFAGGTHLRNSLIALWLALSLY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHH
TAAFIAEIVRSGILAISKGQTEAAAALGLRPKRIMNLVILPQALRVIIPPLISNYLNLTK
HHHHHHHHHHCCCEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NSSLAIAVGYMDLTGTLMGITMNQTGRELETVLLGMLVYLTISLLISSVMNWYNNRVKLV
CCCEEEEEEEEHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
ER
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8809753 [H]