| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99080134
Identifier: 99080134
GI number: 99080134
Start: 299318
End: 300022
Strand: Direct
Name: 99080134
Synonym: TM1040_0293
Alternate gene names: NA
Gene position: 299318-300022 (Clockwise)
Preceding gene: 99080133
Following gene: 99080135
Centisome position: 9.35
GC content: 63.12
Gene sequence:
>705_bases ATGAGTGAATGGAAACAGAAGCGATTCTGGAAAGCAGTCAGCGTCGAGGAGGACGACAGCGGTTTTGCCGTGGCTCTGGA CGGGCGGCGCGTGAAAACACCGGCAAAAACCGCGCTATTGGTGCCCACGCGCGCGCTGGCCGACGCCATCGCCGCCGAGT GGGACGCACAGGAGGAGCAAATCGACCCGCTGTCGATGCCCTACACGCGCTCTGCCAATGCGGCCATCGACAAGGTCGCG GTACAGTTTGCCGAGGTGGCGGATATGCTGGCGGAATACGGCGACAGTGATCTGTTGTGCTACCGCGCCGAAAGCCCCGA AGGACTGGTGGCGCGGCAGAGCGAATCTTGGGACGCAGCGCTCGATTGGGCCGAGGGCGCGCTGGGCGCACGCCTCTTGC CGCGTGCCGGGATCCTGCATGCACCCCAGGATAGCGCCGCTTTGGAGACCCTGCGCACCCGAGTGCATCAAATGACGCCG TTTCAGCTCGCGGCCTTTCACGATTTGGTGGGGTTGACCGGATCCTTGATCCTTGGATTCGCCACCGCAGAGGGCTGGCG CGCGTTGGATGAGATCTGGGAAATTTCGCGCATTGATGAGCGCTGGCAAGAAGAGCTCTGGGGCCCCGATGACGAGGCAC AGGCCATCGAAGCCCAGAAAAAACAGGCCTTTGAGCACGCGGCAGCCTTCTACGCCCGCGCCTGA
Upstream 100 bases:
>100_bases CCGGATCTGCTGCGCCGGATCTGGTCGGACTGATCCCGTCAGCGACCACGCTAGAGACAAAGACCGAGACGAAGACCGAG ACGAAGAAGGACAGACCTAG
Downstream 100 bases:
>100_bases GCCGCGCGCCGAGAGCAGTGCGAATCCATCTGCGTTTTTGCGACATCGATGGCGGCGTTCCGGTCGGAGCGCCGTTTGCC GAATCGCGCGGTCTGTGATT
Product: ATP12 ATPase
Products: NA
Alternate protein names: ATP12 Chaperone Protein; Chaperone Protein; Chaperone; ATP12 Chaperone Family Protein; ATPase; ATP12 Atpase; ATP12 Chaperone Protein Family; Chaperone Required For Assembly Of F1-ATPase; ATP Synthase F1 Mitochondrial Assembly Chaperone ATP
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MSEWKQKRFWKAVSVEEDDSGFAVALDGRRVKTPAKTALLVPTRALADAIAAEWDAQEEQIDPLSMPYTRSANAAIDKVA VQFAEVADMLAEYGDSDLLCYRAESPEGLVARQSESWDAALDWAEGALGARLLPRAGILHAPQDSAALETLRTRVHQMTP FQLAAFHDLVGLTGSLILGFATAEGWRALDEIWEISRIDERWQEELWGPDDEAQAIEAQKKQAFEHAAAFYARA
Sequences:
>Translated_234_residues MSEWKQKRFWKAVSVEEDDSGFAVALDGRRVKTPAKTALLVPTRALADAIAAEWDAQEEQIDPLSMPYTRSANAAIDKVA VQFAEVADMLAEYGDSDLLCYRAESPEGLVARQSESWDAALDWAEGALGARLLPRAGILHAPQDSAALETLRTRVHQMTP FQLAAFHDLVGLTGSLILGFATAEGWRALDEIWEISRIDERWQEELWGPDDEAQAIEAQKKQAFEHAAAFYARA >Mature_233_residues SEWKQKRFWKAVSVEEDDSGFAVALDGRRVKTPAKTALLVPTRALADAIAAEWDAQEEQIDPLSMPYTRSANAAIDKVAV QFAEVADMLAEYGDSDLLCYRAESPEGLVARQSESWDAALDWAEGALGARLLPRAGILHAPQDSAALETLRTRVHQMTPF QLAAFHDLVGLTGSLILGFATAEGWRALDEIWEISRIDERWQEELWGPDDEAQAIEAQKKQAFEHAAAFYARA
Specific function: Unknown
COG id: COG5387
COG function: function code O; Chaperone required for the assembly of the mitochondrial F1-ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI21735485, Length=228, Percent_Identity=27.6315789473684, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI24585626, Length=231, Percent_Identity=26.4069264069264, Blast_Score=82, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25914; Mature: 25783
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEWKQKRFWKAVSVEEDDSGFAVALDGRRVKTPAKTALLVPTRALADAIAAEWDAQEEQ CCHHHHHHHHHHCCCCCCCCCEEEEECCCEECCCCHHEEECCHHHHHHHHHHHCCCCHHC IDPLSMPYTRSANAAIDKVAVQFAEVADMLAEYGDSDLLCYRAESPEGLVARQSESWDAA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEECCCCCCHHH LDWAEGALGARLLPRAGILHAPQDSAALETLRTRVHQMTPFQLAAFHDLVGLTGSLILGF HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH ATAEGWRALDEIWEISRIDERWQEELWGPDDEAQAIEAQKKQAFEHAAAFYARA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SEWKQKRFWKAVSVEEDDSGFAVALDGRRVKTPAKTALLVPTRALADAIAAEWDAQEEQ CHHHHHHHHHHCCCCCCCCCEEEEECCCEECCCCHHEEECCHHHHHHHHHHHCCCCHHC IDPLSMPYTRSANAAIDKVAVQFAEVADMLAEYGDSDLLCYRAESPEGLVARQSESWDAA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEECCCCCCHHH LDWAEGALGARLLPRAGILHAPQDSAALETLRTRVHQMTPFQLAAFHDLVGLTGSLILGF HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH ATAEGWRALDEIWEISRIDERWQEELWGPDDEAQAIEAQKKQAFEHAAAFYARA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA