Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080134

Identifier: 99080134

GI number: 99080134

Start: 299318

End: 300022

Strand: Direct

Name: 99080134

Synonym: TM1040_0293

Alternate gene names: NA

Gene position: 299318-300022 (Clockwise)

Preceding gene: 99080133

Following gene: 99080135

Centisome position: 9.35

GC content: 63.12

Gene sequence:

>705_bases
ATGAGTGAATGGAAACAGAAGCGATTCTGGAAAGCAGTCAGCGTCGAGGAGGACGACAGCGGTTTTGCCGTGGCTCTGGA
CGGGCGGCGCGTGAAAACACCGGCAAAAACCGCGCTATTGGTGCCCACGCGCGCGCTGGCCGACGCCATCGCCGCCGAGT
GGGACGCACAGGAGGAGCAAATCGACCCGCTGTCGATGCCCTACACGCGCTCTGCCAATGCGGCCATCGACAAGGTCGCG
GTACAGTTTGCCGAGGTGGCGGATATGCTGGCGGAATACGGCGACAGTGATCTGTTGTGCTACCGCGCCGAAAGCCCCGA
AGGACTGGTGGCGCGGCAGAGCGAATCTTGGGACGCAGCGCTCGATTGGGCCGAGGGCGCGCTGGGCGCACGCCTCTTGC
CGCGTGCCGGGATCCTGCATGCACCCCAGGATAGCGCCGCTTTGGAGACCCTGCGCACCCGAGTGCATCAAATGACGCCG
TTTCAGCTCGCGGCCTTTCACGATTTGGTGGGGTTGACCGGATCCTTGATCCTTGGATTCGCCACCGCAGAGGGCTGGCG
CGCGTTGGATGAGATCTGGGAAATTTCGCGCATTGATGAGCGCTGGCAAGAAGAGCTCTGGGGCCCCGATGACGAGGCAC
AGGCCATCGAAGCCCAGAAAAAACAGGCCTTTGAGCACGCGGCAGCCTTCTACGCCCGCGCCTGA

Upstream 100 bases:

>100_bases
CCGGATCTGCTGCGCCGGATCTGGTCGGACTGATCCCGTCAGCGACCACGCTAGAGACAAAGACCGAGACGAAGACCGAG
ACGAAGAAGGACAGACCTAG

Downstream 100 bases:

>100_bases
GCCGCGCGCCGAGAGCAGTGCGAATCCATCTGCGTTTTTGCGACATCGATGGCGGCGTTCCGGTCGGAGCGCCGTTTGCC
GAATCGCGCGGTCTGTGATT

Product: ATP12 ATPase

Products: NA

Alternate protein names: ATP12 Chaperone Protein; Chaperone Protein; Chaperone; ATP12 Chaperone Family Protein; ATPase; ATP12 Atpase; ATP12 Chaperone Protein Family; Chaperone Required For Assembly Of F1-ATPase; ATP Synthase F1 Mitochondrial Assembly Chaperone ATP

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MSEWKQKRFWKAVSVEEDDSGFAVALDGRRVKTPAKTALLVPTRALADAIAAEWDAQEEQIDPLSMPYTRSANAAIDKVA
VQFAEVADMLAEYGDSDLLCYRAESPEGLVARQSESWDAALDWAEGALGARLLPRAGILHAPQDSAALETLRTRVHQMTP
FQLAAFHDLVGLTGSLILGFATAEGWRALDEIWEISRIDERWQEELWGPDDEAQAIEAQKKQAFEHAAAFYARA

Sequences:

>Translated_234_residues
MSEWKQKRFWKAVSVEEDDSGFAVALDGRRVKTPAKTALLVPTRALADAIAAEWDAQEEQIDPLSMPYTRSANAAIDKVA
VQFAEVADMLAEYGDSDLLCYRAESPEGLVARQSESWDAALDWAEGALGARLLPRAGILHAPQDSAALETLRTRVHQMTP
FQLAAFHDLVGLTGSLILGFATAEGWRALDEIWEISRIDERWQEELWGPDDEAQAIEAQKKQAFEHAAAFYARA
>Mature_233_residues
SEWKQKRFWKAVSVEEDDSGFAVALDGRRVKTPAKTALLVPTRALADAIAAEWDAQEEQIDPLSMPYTRSANAAIDKVAV
QFAEVADMLAEYGDSDLLCYRAESPEGLVARQSESWDAALDWAEGALGARLLPRAGILHAPQDSAALETLRTRVHQMTPF
QLAAFHDLVGLTGSLILGFATAEGWRALDEIWEISRIDERWQEELWGPDDEAQAIEAQKKQAFEHAAAFYARA

Specific function: Unknown

COG id: COG5387

COG function: function code O; Chaperone required for the assembly of the mitochondrial F1-ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI21735485, Length=228, Percent_Identity=27.6315789473684, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24585626, Length=231, Percent_Identity=26.4069264069264, Blast_Score=82, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25914; Mature: 25783

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEWKQKRFWKAVSVEEDDSGFAVALDGRRVKTPAKTALLVPTRALADAIAAEWDAQEEQ
CCHHHHHHHHHHCCCCCCCCCEEEEECCCEECCCCHHEEECCHHHHHHHHHHHCCCCHHC
IDPLSMPYTRSANAAIDKVAVQFAEVADMLAEYGDSDLLCYRAESPEGLVARQSESWDAA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEECCCCCCHHH
LDWAEGALGARLLPRAGILHAPQDSAALETLRTRVHQMTPFQLAAFHDLVGLTGSLILGF
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ATAEGWRALDEIWEISRIDERWQEELWGPDDEAQAIEAQKKQAFEHAAAFYARA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SEWKQKRFWKAVSVEEDDSGFAVALDGRRVKTPAKTALLVPTRALADAIAAEWDAQEEQ
CHHHHHHHHHHCCCCCCCCCEEEEECCCEECCCCHHEEECCHHHHHHHHHHHCCCCHHC
IDPLSMPYTRSANAAIDKVAVQFAEVADMLAEYGDSDLLCYRAESPEGLVARQSESWDAA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEECCCCCCHHH
LDWAEGALGARLLPRAGILHAPQDSAALETLRTRVHQMTPFQLAAFHDLVGLTGSLILGF
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ATAEGWRALDEIWEISRIDERWQEELWGPDDEAQAIEAQKKQAFEHAAAFYARA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA