Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99079920

Identifier: 99079920

GI number: 99079920

Start: 83364

End: 83552

Strand: Reverse

Name: 99079920

Synonym: TM1040_0079

Alternate gene names: NA

Gene position: 83552-83364 (Counterclockwise)

Preceding gene: 99079921

Following gene: 99079919

Centisome position: 2.61

GC content: 73.02

Gene sequence:

>189_bases
ATGGCCGCTTATGATCGCCTGCCCGCCCCCCTGCGGGCCTGGCTGCGCGAGGCGGCTTTGCCGTGGTCGGCGCAGTCCTG
TCGCCGGATCTGGCAGGCCGCCACCCGCGAAGGGCTCAGCCCCGAAGCGGCACTGGCGCGGCTGGATGCCGCCGAGCGCA
AAACACTCGAACGGGGCGTGCGCAGCTGA

Upstream 100 bases:

>100_bases
GGCGGCGGGCCGATCAGGCAGCATGATCATGAGACGGCAACAGAGAAACGCCAACCGGGGCGCGGTCGCTTTGCCGACCC
GCACCCGACGCGAGGATCCG

Downstream 100 bases:

>100_bases
CCGATTGCTGCGCGGCGTCAGCGAACACTTTCTTTCTGCGCGAAACTGCTGTATGGGCGGAAGTATCTGAGACGATGTGC
CCAGACCCCGGCACGCGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 62; Mature: 61

Protein sequence:

>62_residues
MAAYDRLPAPLRAWLREAALPWSAQSCRRIWQAATREGLSPEAALARLDAAERKTLERGVRS

Sequences:

>Translated_62_residues
MAAYDRLPAPLRAWLREAALPWSAQSCRRIWQAATREGLSPEAALARLDAAERKTLERGVRS
>Mature_61_residues
AAYDRLPAPLRAWLREAALPWSAQSCRRIWQAATREGLSPEAALARLDAAERKTLERGVRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6962; Mature: 6831

Theoretical pI: Translated: 11.13; Mature: 11.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAYDRLPAPLRAWLREAALPWSAQSCRRIWQAATREGLSPEAALARLDAAERKTLERGV
CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
RS
CC
>Mature Secondary Structure 
AAYDRLPAPLRAWLREAALPWSAQSCRRIWQAATREGLSPEAALARLDAAERKTLERGV
CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
RS
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA