Definition Deinococcus geothermalis DSM 11300, complete genome.
Accession NC_008025
Length 2,467,205

Click here to switch to the map view.

The map label for this gene is 94986163

Identifier: 94986163

GI number: 94986163

Start: 2170158

End: 2170652

Strand: Reverse

Name: 94986163

Synonym: Dgeo_2064

Alternate gene names: NA

Gene position: 2170652-2170158 (Counterclockwise)

Preceding gene: 94986164

Following gene: 94986162

Centisome position: 87.98

GC content: 68.89

Gene sequence:

>495_bases
GTGCATCTGGACGGCACCCTGTTGAAGAAGCGCGAGGAGGAAGGGGCGTACTGGCTGGCTCATCCGGACAAGAACCCGCT
CGCGATCCGCGCCGACTTCGTGGGGGGCGAGCTGACGCTCGAGAACGAGCTGTGCGTCTACATCCAGGATGCCCGCTACG
CCGACGGCCTGCCCCACTCCGGCCTGATCGTCACCAAGCGCCCCTGCCCGACCGTGTTCGACCTCACCCCGCAGGAGGTC
GCCGCGACCCACGCCCTGCTCGCGGAAGTGAAGGCGCACCTCGACGCTGCCGTGCAGCCGGACGGGTACACGGTGGGCTG
GAATGTCTACCCGGCGGGCGGGCAGCACATCCCGCATGTTCACCTGCACGTCATTCCCCGCTGGAATACGGACGCGGCGG
CGGGCGCAGGGCTGCGGTTCTTCCTCAAAGAAGCCGCGCGGGAAGCGGAGCGACGATGGAGGCCCGAGGTGTCCGCTCTT
CCCGACCCCGCCTGA

Upstream 100 bases:

>100_bases
AGGAGAGTGTGAAATCTCGCCGGAGTTACGGGGGCACCGCGCCGGAGCGCGTGCGTGAACAGGTCGCGGCAGCAAAGGCG
GCGCTCTCGTGAAGGTGACC

Downstream 100 bases:

>100_bases
ACCCCGCTTCATGAAGGAGGCCCCGACATGACCCTCACCCCAGTGTCCATCAACACCATGCACGTCAAGCTGCGGCAGGC
CGCGCCCGCCGACTTTCCCC

Product: histidine triad (HIT) protein

Products: NA

Alternate protein names: Cell-Cycle Regulation Histidine Triad Protein; Protein Hit; Helicase-Related Protein; Cell-Cycle Regulation Histidine Triad HIT Protein

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MHLDGTLLKKREEEGAYWLAHPDKNPLAIRADFVGGELTLENELCVYIQDARYADGLPHSGLIVTKRPCPTVFDLTPQEV
AATHALLAEVKAHLDAAVQPDGYTVGWNVYPAGGQHIPHVHLHVIPRWNTDAAAGAGLRFFLKEAAREAERRWRPEVSAL
PDPA

Sequences:

>Translated_164_residues
MHLDGTLLKKREEEGAYWLAHPDKNPLAIRADFVGGELTLENELCVYIQDARYADGLPHSGLIVTKRPCPTVFDLTPQEV
AATHALLAEVKAHLDAAVQPDGYTVGWNVYPAGGQHIPHVHLHVIPRWNTDAAAGAGLRFFLKEAAREAERRWRPEVSAL
PDPA
>Mature_164_residues
MHLDGTLLKKREEEGAYWLAHPDKNPLAIRADFVGGELTLENELCVYIQDARYADGLPHSGLIVTKRPCPTVFDLTPQEV
AATHALLAEVKAHLDAAVQPDGYTVGWNVYPAGGQHIPHVHLHVIPRWNTDAAAGAGLRFFLKEAAREAERRWRPEVSAL
PDPA

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18097; Mature: 18097

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLDGTLLKKREEEGAYWLAHPDKNPLAIRADFVGGELTLENELCVYIQDARYADGLPHS
CCCCCHHHHHHCCCCCEEEECCCCCCEEEEEEECCCEEEECCCEEEEEECCCCCCCCCCC
GLIVTKRPCPTVFDLTPQEVAATHALLAEVKAHLDAAVQPDGYTVGWNVYPAGGQHIPHV
CEEEECCCCCCEECCCHHHHHHHHHHHHHHHHHHCCEECCCCEEEEEEEECCCCCCCCEE
HLHVIPRWNTDAAAGAGLRFFLKEAAREAERRWRPEVSALPDPA
EEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MHLDGTLLKKREEEGAYWLAHPDKNPLAIRADFVGGELTLENELCVYIQDARYADGLPHS
CCCCCHHHHHHCCCCCEEEECCCCCCEEEEEEECCCEEEECCCEEEEEECCCCCCCCCCC
GLIVTKRPCPTVFDLTPQEVAATHALLAEVKAHLDAAVQPDGYTVGWNVYPAGGQHIPHV
CEEEECCCCCCEECCCHHHHHHHHHHHHHHHHHHCCEECCCCEEEEEEEECCCCCCCCEE
HLHVIPRWNTDAAAGAGLRFFLKEAAREAERRWRPEVSALPDPA
EEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA