| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is cutS [H]
Identifier: 94986047
GI number: 94986047
Start: 2051258
End: 2051755
Strand: Reverse
Name: cutS [H]
Synonym: Dgeo_1948
Alternate gene names: 94986047
Gene position: 2051755-2051258 (Counterclockwise)
Preceding gene: 94986051
Following gene: 94986046
Centisome position: 83.16
GC content: 64.86
Gene sequence:
>498_bases ATGAACGTGACCGTAACGGTAAATGGCCGCCCCTACACGCGTGACGTTGAACCGCGGACGCTGCTGGTGTACTTCCTGCG CGAACATCTGGGCCTCACGGGCACCCACGTGGGCTGCGACACCAGCCAATGCGGCGCGTGTACCGTCCACCTGAACGGCC ACGCGGTCAAGAGCTGCACCGTCCTGGCTGTGCAGGCTGATGGCCAGCAGGTCACCACCATCGAGGGCCTCGGTACCCCA GCCGATCTCCACCCCCTTCAGGCAGGCTTCTGGGAGAAACATGGCCTCCAGTGCGGCTTTTGCACCCCCGGCATGATTAT GAGCGCCGCCGAGCTGCTGAAGCACAACCCCGACCCCAGCGAGGAAGAGATTCGCCACCACCTCGAAGGCAACTACTGCC GCTGCACCGGCTACCACAACATCGTCCTTGCTGTGCAGCAGGCGGCAAGCGCGATTCGCGAGGCAACGGCGGCAGCGGGA CAGGCGGCGGACGACTGA
Upstream 100 bases:
>100_bases AGACCCGTTCTCGGCTCGACACTCCCCTCTCGCCCCCAACTCGGAGGTGGACCATGCAGGACAGGAACCGCCGTACCCCG CCCATTCGTGGAGGTCAACT
Downstream 100 bases:
>100_bases GCTCAGCGCGGGAGGGACACCCCATGACCGAATCCAGACCCGAAAAATACGTAGGCCAGGCCCTCAAGCGCAAGGAAGAT CCCCGCTTCATCACAGGGAC
Product: (2Fe-2S)-binding
Products: NA
Alternate protein names: CO dehydrogenase subunit S; CO-DH S [H]
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MNVTVTVNGRPYTRDVEPRTLLVYFLREHLGLTGTHVGCDTSQCGACTVHLNGHAVKSCTVLAVQADGQQVTTIEGLGTP ADLHPLQAGFWEKHGLQCGFCTPGMIMSAAELLKHNPDPSEEEIRHHLEGNYCRCTGYHNIVLAVQQAASAIREATAAAG QAADD
Sequences:
>Translated_165_residues MNVTVTVNGRPYTRDVEPRTLLVYFLREHLGLTGTHVGCDTSQCGACTVHLNGHAVKSCTVLAVQADGQQVTTIEGLGTP ADLHPLQAGFWEKHGLQCGFCTPGMIMSAAELLKHNPDPSEEEIRHHLEGNYCRCTGYHNIVLAVQQAASAIREATAAAG QAADD >Mature_165_residues MNVTVTVNGRPYTRDVEPRTLLVYFLREHLGLTGTHVGCDTSQCGACTVHLNGHAVKSCTVLAVQADGQQVTTIEGLGTP ADLHPLQAGFWEKHGLQCGFCTPGMIMSAAELLKHNPDPSEEEIRHHLEGNYCRCTGYHNIVLAVQQAASAIREATAAAG QAADD
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG2080
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI91823271, Length=148, Percent_Identity=42.5675675675676, Blast_Score=105, Evalue=1e-23, Organism=Homo sapiens, GI71773480, Length=152, Percent_Identity=39.4736842105263, Blast_Score=99, Evalue=2e-21, Organism=Escherichia coli, GI1786480, Length=168, Percent_Identity=44.047619047619, Blast_Score=145, Evalue=1e-36, Organism=Escherichia coli, GI1789232, Length=144, Percent_Identity=41.6666666666667, Blast_Score=111, Evalue=3e-26, Organism=Caenorhabditis elegans, GI17540638, Length=154, Percent_Identity=43.5064935064935, Blast_Score=130, Evalue=3e-31, Organism=Caenorhabditis elegans, GI17539860, Length=150, Percent_Identity=40, Blast_Score=122, Evalue=9e-29, Organism=Caenorhabditis elegans, GI32566215, Length=155, Percent_Identity=38.7096774193548, Blast_Score=119, Evalue=5e-28, Organism=Drosophila melanogaster, GI17737937, Length=148, Percent_Identity=41.8918918918919, Blast_Score=108, Evalue=2e-24, Organism=Drosophila melanogaster, GI24647201, Length=158, Percent_Identity=36.7088607594937, Blast_Score=100, Evalue=5e-22, Organism=Drosophila melanogaster, GI24647197, Length=164, Percent_Identity=36.5853658536585, Blast_Score=97, Evalue=6e-21, Organism=Drosophila melanogaster, GI24647195, Length=164, Percent_Identity=36.5853658536585, Blast_Score=97, Evalue=6e-21, Organism=Drosophila melanogaster, GI24647199, Length=158, Percent_Identity=35.4430379746835, Blast_Score=92, Evalue=2e-19, Organism=Drosophila melanogaster, GI24647193, Length=160, Percent_Identity=36.25, Blast_Score=88, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002888 - InterPro: IPR012675 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 17677; Mature: 17677
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVTVTVNGRPYTRDVEPRTLLVYFLREHLGLTGTHVGCDTSQCGACTVHLNGHAVKSCT CEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCEECEEE VLAVQADGQQVTTIEGLGTPADLHPLQAGFWEKHGLQCGFCTPGMIMSAAELLKHNPDPS EEEEECCCCEEEEEECCCCCCCCCCCCCCCHHHCCCEECCCCCHHHHHHHHHHHCCCCCC EEEIRHHLEGNYCRCTGYHNIVLAVQQAASAIREATAAAGQAADD HHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNVTVTVNGRPYTRDVEPRTLLVYFLREHLGLTGTHVGCDTSQCGACTVHLNGHAVKSCT CEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCEECEEE VLAVQADGQQVTTIEGLGTPADLHPLQAGFWEKHGLQCGFCTPGMIMSAAELLKHNPDPS EEEEECCCCEEEEEECCCCCCCCCCCCCCCHHHCCCEECCCCCHHHHHHHHHHHCCCCCC EEEIRHHLEGNYCRCTGYHNIVLAVQQAASAIREATAAAGQAADD HHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]