| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is glgP [H]
Identifier: 94985300
GI number: 94985300
Start: 1273197
End: 1275725
Strand: Reverse
Name: glgP [H]
Synonym: Dgeo_1198
Alternate gene names: 94985300
Gene position: 1275725-1273197 (Counterclockwise)
Preceding gene: 94985301
Following gene: 94985299
Centisome position: 51.71
GC content: 65.28
Gene sequence:
>2529_bases ATGAACGTCATCGGTCAGGTCACCGTCCTTCCCCAGTTGCCTCCGGAGCTGGGGCGGCTTTCCGAACTCGCCTACAACCT GTACTGGTCGTGGACCCCGCACGCTCAGGCACTGTACCGCGACCTCGATCCCGCAATTTGGGAGCGCTTCCAGCACAACC CCGTGCGGGTGCTGCTGGAGGTATCGCAAGACCGTCTGACTCAGGCCGCAGCCGACCCAGAGTATGTGGGCCGGTACACG CGGGTTCTGGCCGACTTCGACGCTTACATGCACAAAAAGGACACCTGGGCGAGCCGGCATGCGGCGGACCTGGCCCCGGT GGCCTACTTCAGCATGGAATATGGGTTTGCCGAGTCGCTGCCGATCTACAGTGGTGGCCTGGGTGTGCTGGCGGGCGACC ACTGCAAGAGTGCTTCCGACCTGGGCCTGCCCTTTACCGCCGTCGGGATGCTGTTTCACCAGGGCTACTTTCGTCAGCTG CTCAACCGCGAGGGCTGGCAGGAGGAAGCCTATGACGAGCTTGACCTGACCACCCTGCCCCTCCGCCCCGCCCAGACGCC CGCCGGCGAGGAGGTCCGGGTACAAGCTCAGATTGCGGACCGTGACGTGCAGGTGCGGGTCTGGGAACTCGCGGTGGGCC GAATCAAGGTGCTGCTGCTCGACACCAATGTGCCCGAAAACAGCGAGGACGACCGCAAGCTCACCGCGCGGCTCTACGGC GGCAACCAGGACCTGCGGTTCCAGCAGTACCTGCTGTTGGGTGTGGCGGGGATTCGCGCGCTGCGTGCGCTGAATATTCC GGCGGGCGTCTATCACATGAACGAGGGGCACGCGGCGCTGTTGGGCCTGGAGCGGATCCGGGAGCTGGTGGAAGGCGGGC TGGATTTCCGTACCGCCCTGGAGACGGTCGCGAGCAACACCCTCTTTACGACCCACACGCCGGTCCCCGCCGGAAACGAT GCCTTTGCCTATGACCTGGTCGACCGGTACCTGGGTCAGTGGCCCGCGCGCCTCCATACCTCCCGCGAGGAACTCTACGG CCTCGCTCGGCAGGACCAGTTCTGGGACGGCCACTGGGTTCCGACCTTCAGCATGACGGTGCTTGCCCTGAACCTCAGCC GCGCCGCAAACGGCGTATCCGAGTTGCACGGCGAGGTCAGCCGCGACATGTGGAAATTCTTGTATCCGGGTGCAGAAGCG GCGGAGGTGCCCATCGGGCATATCACCAACGGCGCACATAACCTCACCTTCACCTCGCAGGCGATGCGCGACCTGCTGAG CACCGTCCTGCCTGCCGACTGGACCGAACGCCTCCAGGAAGAGGAGATGTGGGCGGCGGTGGAGGGCCTCTCCGACGCGC AGCTCGCGGACGTGCAGCTGGACATGAAGCGCGAGATGATCGCTTTCGTGCGCCGCCGCCTGCGCGAGCAGCTCACGCGC AACGGGGCCAGCGCTGCTGAAGTGGCTGCCACCGAGAACGTGCTCTCCGAGAAGGCGCTGACCATCGGCTTCGCGCGGCG CTTTGCCACCTACAAGCGGGCCACCCTGCTGTTTCGTGACAAGGCCCGTCTCAGCCGTATCGTGAACGACCCGGACCGCC CAGTGCAGTTTGTCTTTGCTGGGAAGGCGCACCCCGCCGACAACCCGGGCAAGGCCTTTATTCAGGAGATCTACCGAGTC AGTCAGGAGCCCGAGTTCCGCGGCAAGATCGTGATGCTGGAAAACTATGATCTGAACGTGGCTCGCCACCTTGTGCAGGG CGTAGACATCTGGCTGAATAACCCCCGCCGCCCGCTGGAGGCGTCTGGCACCAGCGGGATGAAGGCCAGCTTTAACGGCG CGCCCAACTTCAGCATTCTGGACGGTTGGTGGCGTGAGGGGTACGACGGCACCAACGGCTGGCCCATCGGCGAGGACCGC GAGTATGCCGACCTGAATGTGCAAGACGATGCCGATGCCTACAGCCTCTACCAGACGCTCGAGCATCAGATCGTGCCGCT GTACTACGCGCCTGCCTCGCCGGAGGCGGAAGGACGGAGCGGCTGGGCGCAGATGGTCCGCCGCGCCATCCAGACTGTCA GCCCGCGCTTCTCGATGCAGCGGCAGGTAATTGACTACACGCAGCAGTACTACCTGCCGCTTAGCAAAAGGGGCGCGATC CTGGCGGCAAACGGCAGCCAGCGCGCCCGCGAGATCGCCAGCTGGAAGACCTGGGTGCGCCAGCAGTGGCCGCACACCAG CCTGAACGCGACGGCTCACCTGCCCGCTACTGCCAAACCCGGTCAAAAGATCGAGGTGCAGGCCAGCGTGAACCCGGCGG GGATTCGCCCTGAGGAACTGCGCGTCGAAGCGGTGCTCAAGCGCGGCAACCACGTGACCCGCGTGCCCCTCGCTCCGCAG GGGGACGGCCGGTACAGTGCCCAGGTGCCCTTGGAAGACAGCGGCCTGTACTCGGTGGGGGTGCGCATGCTGCCCGAGAT CGACGGCCTCAGCAATGAACTGGAGGCCGGCCTCATCAAGTGGGCCTGA
Upstream 100 bases:
>100_bases GCTCAGCGGTCCAGCCTGTCTGGGCAGGTTCTTGGTGTTGCGCGTGGAGGCTTTGCCTGGGCAAAAGGGAACCCGCCTGC CTGGTGTAAGCTCAGCGGGT
Downstream 100 bases:
>100_bases CCCGAGGGCGGCCCCTGTCTGCCTCTGTCCTCCTACGCGGCTGATCGTTGACGGTCCCTGGCCCCATAATGCCCCCTGTG CGCCGCGCCCTGTCCTCTCT
Product: Alpha-glucan phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 842; Mature: 842
Protein sequence:
>842_residues MNVIGQVTVLPQLPPELGRLSELAYNLYWSWTPHAQALYRDLDPAIWERFQHNPVRVLLEVSQDRLTQAAADPEYVGRYT RVLADFDAYMHKKDTWASRHAADLAPVAYFSMEYGFAESLPIYSGGLGVLAGDHCKSASDLGLPFTAVGMLFHQGYFRQL LNREGWQEEAYDELDLTTLPLRPAQTPAGEEVRVQAQIADRDVQVRVWELAVGRIKVLLLDTNVPENSEDDRKLTARLYG GNQDLRFQQYLLLGVAGIRALRALNIPAGVYHMNEGHAALLGLERIRELVEGGLDFRTALETVASNTLFTTHTPVPAGND AFAYDLVDRYLGQWPARLHTSREELYGLARQDQFWDGHWVPTFSMTVLALNLSRAANGVSELHGEVSRDMWKFLYPGAEA AEVPIGHITNGAHNLTFTSQAMRDLLSTVLPADWTERLQEEEMWAAVEGLSDAQLADVQLDMKREMIAFVRRRLREQLTR NGASAAEVAATENVLSEKALTIGFARRFATYKRATLLFRDKARLSRIVNDPDRPVQFVFAGKAHPADNPGKAFIQEIYRV SQEPEFRGKIVMLENYDLNVARHLVQGVDIWLNNPRRPLEASGTSGMKASFNGAPNFSILDGWWREGYDGTNGWPIGEDR EYADLNVQDDADAYSLYQTLEHQIVPLYYAPASPEAEGRSGWAQMVRRAIQTVSPRFSMQRQVIDYTQQYYLPLSKRGAI LAANGSQRAREIASWKTWVRQQWPHTSLNATAHLPATAKPGQKIEVQASVNPAGIRPEELRVEAVLKRGNHVTRVPLAPQ GDGRYSAQVPLEDSGLYSVGVRMLPEIDGLSNELEAGLIKWA
Sequences:
>Translated_842_residues MNVIGQVTVLPQLPPELGRLSELAYNLYWSWTPHAQALYRDLDPAIWERFQHNPVRVLLEVSQDRLTQAAADPEYVGRYT RVLADFDAYMHKKDTWASRHAADLAPVAYFSMEYGFAESLPIYSGGLGVLAGDHCKSASDLGLPFTAVGMLFHQGYFRQL LNREGWQEEAYDELDLTTLPLRPAQTPAGEEVRVQAQIADRDVQVRVWELAVGRIKVLLLDTNVPENSEDDRKLTARLYG GNQDLRFQQYLLLGVAGIRALRALNIPAGVYHMNEGHAALLGLERIRELVEGGLDFRTALETVASNTLFTTHTPVPAGND AFAYDLVDRYLGQWPARLHTSREELYGLARQDQFWDGHWVPTFSMTVLALNLSRAANGVSELHGEVSRDMWKFLYPGAEA AEVPIGHITNGAHNLTFTSQAMRDLLSTVLPADWTERLQEEEMWAAVEGLSDAQLADVQLDMKREMIAFVRRRLREQLTR NGASAAEVAATENVLSEKALTIGFARRFATYKRATLLFRDKARLSRIVNDPDRPVQFVFAGKAHPADNPGKAFIQEIYRV SQEPEFRGKIVMLENYDLNVARHLVQGVDIWLNNPRRPLEASGTSGMKASFNGAPNFSILDGWWREGYDGTNGWPIGEDR EYADLNVQDDADAYSLYQTLEHQIVPLYYAPASPEAEGRSGWAQMVRRAIQTVSPRFSMQRQVIDYTQQYYLPLSKRGAI LAANGSQRAREIASWKTWVRQQWPHTSLNATAHLPATAKPGQKIEVQASVNPAGIRPEELRVEAVLKRGNHVTRVPLAPQ GDGRYSAQVPLEDSGLYSVGVRMLPEIDGLSNELEAGLIKWA >Mature_842_residues MNVIGQVTVLPQLPPELGRLSELAYNLYWSWTPHAQALYRDLDPAIWERFQHNPVRVLLEVSQDRLTQAAADPEYVGRYT RVLADFDAYMHKKDTWASRHAADLAPVAYFSMEYGFAESLPIYSGGLGVLAGDHCKSASDLGLPFTAVGMLFHQGYFRQL LNREGWQEEAYDELDLTTLPLRPAQTPAGEEVRVQAQIADRDVQVRVWELAVGRIKVLLLDTNVPENSEDDRKLTARLYG GNQDLRFQQYLLLGVAGIRALRALNIPAGVYHMNEGHAALLGLERIRELVEGGLDFRTALETVASNTLFTTHTPVPAGND AFAYDLVDRYLGQWPARLHTSREELYGLARQDQFWDGHWVPTFSMTVLALNLSRAANGVSELHGEVSRDMWKFLYPGAEA AEVPIGHITNGAHNLTFTSQAMRDLLSTVLPADWTERLQEEEMWAAVEGLSDAQLADVQLDMKREMIAFVRRRLREQLTR NGASAAEVAATENVLSEKALTIGFARRFATYKRATLLFRDKARLSRIVNDPDRPVQFVFAGKAHPADNPGKAFIQEIYRV SQEPEFRGKIVMLENYDLNVARHLVQGVDIWLNNPRRPLEASGTSGMKASFNGAPNFSILDGWWREGYDGTNGWPIGEDR EYADLNVQDDADAYSLYQTLEHQIVPLYYAPASPEAEGRSGWAQMVRRAIQTVSPRFSMQRQVIDYTQQYYLPLSKRGAI LAANGSQRAREIASWKTWVRQQWPHTSLNATAHLPATAKPGQKIEVQASVNPAGIRPEELRVEAVLKRGNHVTRVPLAPQ GDGRYSAQVPLEDSGLYSVGVRMLPEIDGLSNELEAGLIKWA
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Escherichia coli, GI2367228, Length=384, Percent_Identity=23.9583333333333, Blast_Score=64, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011834 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 94483; Mature: 94483
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVIGQVTVLPQLPPELGRLSELAYNLYWSWTPHAQALYRDLDPAIWERFQHNPVRVLLE CCCCCCEEECCCCCHHHHHHHHHHHHHEEECCCHHHHHHHHCCHHHHHHHCCCCEEEEEE VSQDRLTQAAADPEYVGRYTRVLADFDAYMHKKDTWASRHAADLAPVAYFSMEYGFAESL HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCC PIYSGGLGVLAGDHCKSASDLGLPFTAVGMLFHQGYFRQLLNREGWQEEAYDELDLTTLP CEECCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCEEEC LRPAQTPAGEEVRVQAQIADRDVQVRVWELAVGRIKVLLLDTNVPENSEDDRKLTARLYG CCCCCCCCCCCEEEEEEECCCCEEEEEEEEEECEEEEEEEECCCCCCCCCCCEEEEEEEC GNQDLRFQQYLLLGVAGIRALRALNIPAGVYHMNEGHAALLGLERIRELVEGGLDFRTAL CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCHHHHHH ETVASNTLFTTHTPVPAGNDAFAYDLVDRYLGQWPARLHTSREELYGLARQDQFWDGHWV HHHHCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHCCHHHHHHHHHCCCCCCCCCC PTFSMTVLALNLSRAANGVSELHGEVSRDMWKFLYPGAEAAEVPIGHITNGAHNLTFTSQ CHHHHHHHEEEHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEHHH AMRDLLSTVLPADWTERLQEEEMWAAVEGLSDAQLADVQLDMKREMIAFVRRRLREQLTR HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH NGASAAEVAATENVLSEKALTIGFARRFATYKRATLLFRDKARLSRIVNDPDRPVQFVFA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHCCCCCCEEEEEE GKAHPADNPGKAFIQEIYRVSQEPEFRGKIVMLENYDLNVARHLVQGVDIWLNNPRRPLE CCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHEEECCCCCCCC ASGTSGMKASFNGAPNFSILDGWWREGYDGTNGWPIGEDREYADLNVQDDADAYSLYQTL CCCCCCCEECCCCCCCCCEECHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH EHQIVPLYYAPASPEAEGRSGWAQMVRRAIQTVSPRFSMQRQVIDYTQQYYLPLSKRGAI HHCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEE LAANGSQRAREIASWKTWVRQQWPHTSLNATAHLPATAKPGQKIEVQASVNPAGIRPEEL EEECCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCEEEEEECCCCCCCCHHHH RVEAVLKRGNHVTRVPLAPQGDGRYSAQVPLEDSGLYSVGVRMLPEIDGLSNELEAGLIK HHHHHHHCCCCEEEECCCCCCCCCEEEECCCCCCCHHHHHHHHCCCCCCCCHHHHCCCCC WA CC >Mature Secondary Structure MNVIGQVTVLPQLPPELGRLSELAYNLYWSWTPHAQALYRDLDPAIWERFQHNPVRVLLE CCCCCCEEECCCCCHHHHHHHHHHHHHEEECCCHHHHHHHHCCHHHHHHHCCCCEEEEEE VSQDRLTQAAADPEYVGRYTRVLADFDAYMHKKDTWASRHAADLAPVAYFSMEYGFAESL HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCC PIYSGGLGVLAGDHCKSASDLGLPFTAVGMLFHQGYFRQLLNREGWQEEAYDELDLTTLP CEECCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCEEEC LRPAQTPAGEEVRVQAQIADRDVQVRVWELAVGRIKVLLLDTNVPENSEDDRKLTARLYG CCCCCCCCCCCEEEEEEECCCCEEEEEEEEEECEEEEEEEECCCCCCCCCCCEEEEEEEC GNQDLRFQQYLLLGVAGIRALRALNIPAGVYHMNEGHAALLGLERIRELVEGGLDFRTAL CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCHHHHHH ETVASNTLFTTHTPVPAGNDAFAYDLVDRYLGQWPARLHTSREELYGLARQDQFWDGHWV HHHHCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHCCHHHHHHHHHCCCCCCCCCC PTFSMTVLALNLSRAANGVSELHGEVSRDMWKFLYPGAEAAEVPIGHITNGAHNLTFTSQ CHHHHHHHEEEHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEHHH AMRDLLSTVLPADWTERLQEEEMWAAVEGLSDAQLADVQLDMKREMIAFVRRRLREQLTR HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH NGASAAEVAATENVLSEKALTIGFARRFATYKRATLLFRDKARLSRIVNDPDRPVQFVFA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHCCCCCCEEEEEE GKAHPADNPGKAFIQEIYRVSQEPEFRGKIVMLENYDLNVARHLVQGVDIWLNNPRRPLE CCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHEEECCCCCCCC ASGTSGMKASFNGAPNFSILDGWWREGYDGTNGWPIGEDREYADLNVQDDADAYSLYQTL CCCCCCCEECCCCCCCCCEECHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH EHQIVPLYYAPASPEAEGRSGWAQMVRRAIQTVSPRFSMQRQVIDYTQQYYLPLSKRGAI HHCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEE LAANGSQRAREIASWKTWVRQQWPHTSLNATAHLPATAKPGQKIEVQASVNPAGIRPEEL EEECCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCEEEEEECCCCCCCCHHHH RVEAVLKRGNHVTRVPLAPQGDGRYSAQVPLEDSGLYSVGVRMLPEIDGLSNELEAGLIK HHHHHHHCCCCEEEECCCCCCCCCEEEECCCCCCCHHHHHHHHCCCCCCCCHHHHCCCCC WA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]