Definition Deinococcus geothermalis DSM 11300, complete genome.
Accession NC_008025
Length 2,467,205

Click here to switch to the map view.

The map label for this gene is 94985301

Identifier: 94985301

GI number: 94985301

Start: 1275837

End: 1276133

Strand: Reverse

Name: 94985301

Synonym: Dgeo_1199

Alternate gene names: NA

Gene position: 1276133-1275837 (Counterclockwise)

Preceding gene: 94985302

Following gene: 94985300

Centisome position: 51.72

GC content: 63.97

Gene sequence:

>297_bases
ATGCTCGCCGTTCTGCGCCTGTTCGTAGAACTGGTCACCAACGTGGTCATTTTTGGGTACGTCGCTGCCGCGATGCTGGT
CCTGATCCGTGGAGGCGGACTGCTGCATGCCCGGTTGCAGGTGGCCGAGGGCCTGCTGCTGGCCCTCAACCTCAAGGTTG
CGGCCACACTGCTGCGGACGCTGGAGATCACCACCTGGAACCAGATTGGCCTGTTCGTCGCGGTGTTTGTGCTGCGGACC
CTCCTGAAGCGGGTCGTCAACCACGAACGCCGGGCACTCCTGGGGCAGGCGGGTTGA

Upstream 100 bases:

>100_bases
GCCCTGAACTACTTCCTTGGCCAAGAGGTGCGCGAGGAAACCGAGCGGATCGCGGACACCAAGATCACCGCTCCTATTCG
CCGCGAACAGGGCTAGTACG

Downstream 100 bases:

>100_bases
ACGAGGCTGCTGCTCAGCGGTCCAGCCTGTCTGGGCAGGTTCTTGGTGTTGCGCGTGGAGGCTTTGCCTGGGCAAAAGGG
AACCCGCCTGCCTGGTGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MLAVLRLFVELVTNVVIFGYVAAAMLVLIRGGGLLHARLQVAEGLLLALNLKVAATLLRTLEITTWNQIGLFVAVFVLRT
LLKRVVNHERRALLGQAG

Sequences:

>Translated_98_residues
MLAVLRLFVELVTNVVIFGYVAAAMLVLIRGGGLLHARLQVAEGLLLALNLKVAATLLRTLEITTWNQIGLFVAVFVLRT
LLKRVVNHERRALLGQAG
>Mature_98_residues
MLAVLRLFVELVTNVVIFGYVAAAMLVLIRGGGLLHARLQVAEGLLLALNLKVAATLLRTLEITTWNQIGLFVAVFVLRT
LLKRVVNHERRALLGQAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10715; Mature: 10715

Theoretical pI: Translated: 12.06; Mature: 12.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAVLRLFVELVTNVVIFGYVAAAMLVLIRGGGLLHARLQVAEGLLLALNLKVAATLLRT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEITTWNQIGLFVAVFVLRTLLKRVVNHERRALLGQAG
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLAVLRLFVELVTNVVIFGYVAAAMLVLIRGGGLLHARLQVAEGLLLALNLKVAATLLRT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEITTWNQIGLFVAVFVLRTLLKRVVNHERRALLGQAG
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA