Click here to switch to the map view.

The map label for this gene is rhtA [H]

Identifier: 94985299

GI number: 94985299

Start: 1272241

End: 1273128

Strand: Reverse

Name: rhtA [H]

Synonym: Dgeo_1197

Alternate gene names: 94985299

Gene position: 1273128-1272241 (Counterclockwise)

Preceding gene: 94985300

Following gene: 94985295

Centisome position: 51.6

GC content: 68.24

Gene sequence:

>888_bases
ATGCCCCCTGTGCGCCGCGCCCTGTCCTCTCTGCCTCCCATTCCGGCACTGCTGCTCTCGATGCTGAGTATCCAGGGCGG
GGCGGCCTTCGCCAAAACCTTATTTCCGACGTTGGGCGCGCTCGGAACGACGGCCCTGCGGGTGACGCTGGCCGCGGCTC
TGTTGAGTCTGGTCTTCCGACCTCGCCTGGGCGCGCTGACCACGTCGGCTTGGCGGGCCGTCTTGCCCTATGGCCTGGCC
CTGGGACTGATGAACCTCACCTTTTACCTGTCTCTTACGCGGCTGCCGCTGGGGCTGGCGGTGACGCTGGAGTTCGTGGG
GCCGCTGGTGCTGTCGCTCGCGCTCTCACGCCGCCTGCAAGATCTGCTCTGGGTGGGACTGGCGGCCCTGGGCATCGTGC
TGATCGCGCCGCGCGGCGGAGGAGAGGGGCACTTGGACCTGCTGGGTGCGGGGCTGGCCCTGACCGCCGGGGCCTTGTGG
GCGGGCTATATCCTGGCGGGCGGAGCAGTGGGCCGGCGGGTACCGGGTGTGACCGGGGTTGTTGCCGGCATGATGGTGGC
GGCGGTTGTGACCTTGCCTTTCGGGTTTGCCACCGCAGGTACCGCGCTGCTGGCGCCCTCTGCCCTCTTGGCGGGCCTGG
CGGTCGCCATCCTCTCCAGCGCCCTGCCCTACAGCCTAGAGATGGTTGCCCTGCGTGCCATTCCTGCCCGTGTGTTCGGC
GTCTTGATGAGCGTCGAACCCGCCATCGCGGCCCTGAGCGGCCTGCTGTTCCTGCACGAGCGCCTCTCTGCCCTGCAGTG
GCTTGCCATGCTCTGTGTGATTGCGGCCAGCGTCGGTATCAGCCTGAGCGGAGAGCGACAGGTGGTGGAAGCGGAACCGG
CAAATTGA

Upstream 100 bases:

>100_bases
AACTGGAGGCCGGCCTCATCAAGTGGGCCTGACCCGAGGGCGGCCCCTGTCTGCCTCTGTCCTCCTACGCGGCTGATCGT
TGACGGTCCCTGGCCCCATA

Downstream 100 bases:

>100_bases
GGATGGCTGCTTGGGTTCAGGTGGTCGGGGCTGACCCGGCCTTGACGTGGCAGGCGTGGTCCCCGCAAAGCAAAACCGCC
CCAGCCTCAGCCGGAGCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MPPVRRALSSLPPIPALLLSMLSIQGGAAFAKTLFPTLGALGTTALRVTLAAALLSLVFRPRLGALTTSAWRAVLPYGLA
LGLMNLTFYLSLTRLPLGLAVTLEFVGPLVLSLALSRRLQDLLWVGLAALGIVLIAPRGGGEGHLDLLGAGLALTAGALW
AGYILAGGAVGRRVPGVTGVVAGMMVAAVVTLPFGFATAGTALLAPSALLAGLAVAILSSALPYSLEMVALRAIPARVFG
VLMSVEPAIAALSGLLFLHERLSALQWLAMLCVIAASVGISLSGERQVVEAEPAN

Sequences:

>Translated_295_residues
MPPVRRALSSLPPIPALLLSMLSIQGGAAFAKTLFPTLGALGTTALRVTLAAALLSLVFRPRLGALTTSAWRAVLPYGLA
LGLMNLTFYLSLTRLPLGLAVTLEFVGPLVLSLALSRRLQDLLWVGLAALGIVLIAPRGGGEGHLDLLGAGLALTAGALW
AGYILAGGAVGRRVPGVTGVVAGMMVAAVVTLPFGFATAGTALLAPSALLAGLAVAILSSALPYSLEMVALRAIPARVFG
VLMSVEPAIAALSGLLFLHERLSALQWLAMLCVIAASVGISLSGERQVVEAEPAN
>Mature_294_residues
PPVRRALSSLPPIPALLLSMLSIQGGAAFAKTLFPTLGALGTTALRVTLAAALLSLVFRPRLGALTTSAWRAVLPYGLAL
GLMNLTFYLSLTRLPLGLAVTLEFVGPLVLSLALSRRLQDLLWVGLAALGIVLIAPRGGGEGHLDLLGAGLALTAGALWA
GYILAGGAVGRRVPGVTGVVAGMMVAAVVTLPFGFATAGTALLAPSALLAGLAVAILSSALPYSLEMVALRAIPARVFGV
LMSVEPAIAALSGLLFLHERLSALQWLAMLCVIAASVGISLSGERQVVEAEPAN

Specific function: Unknown

COG id: COG5006

COG function: function code R; Predicted permease, DMT superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1787033, Length=287, Percent_Identity=48.4320557491289, Blast_Score=220, Evalue=8e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 30049; Mature: 29917

Theoretical pI: Translated: 11.13; Mature: 11.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPVRRALSSLPPIPALLLSMLSIQGGAAFAKTLFPTLGALGTTALRVTLAAALLSLVFR
CCHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PRLGALTTSAWRAVLPYGLALGLMNLTFYLSLTRLPLGLAVTLEFVGPLVLSLALSRRLQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
DLLWVGLAALGIVLIAPRGGGEGHLDLLGAGLALTAGALWAGYILAGGAVGRRVPGVTGV
HHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHH
VAGMMVAAVVTLPFGFATAGTALLAPSALLAGLAVAILSSALPYSLEMVALRAIPARVFG
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
VLMSVEPAIAALSGLLFLHERLSALQWLAMLCVIAASVGISLSGERQVVEAEPAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCC
>Mature Secondary Structure 
PPVRRALSSLPPIPALLLSMLSIQGGAAFAKTLFPTLGALGTTALRVTLAAALLSLVFR
CHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PRLGALTTSAWRAVLPYGLALGLMNLTFYLSLTRLPLGLAVTLEFVGPLVLSLALSRRLQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
DLLWVGLAALGIVLIAPRGGGEGHLDLLGAGLALTAGALWAGYILAGGAVGRRVPGVTGV
HHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHH
VAGMMVAAVVTLPFGFATAGTALLAPSALLAGLAVAILSSALPYSLEMVALRAIPARVFG
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
VLMSVEPAIAALSGLLFLHERLSALQWLAMLCVIAASVGISLSGERQVVEAEPAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]