| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94985295
Identifier: 94985295
GI number: 94985295
Start: 1266188
End: 1267315
Strand: Reverse
Name: 94985295
Synonym: Dgeo_1193
Alternate gene names: NA
Gene position: 1267315-1266188 (Counterclockwise)
Preceding gene: 94985299
Following gene: 94985294
Centisome position: 51.37
GC content: 68.09
Gene sequence:
>1128_bases ATGACAAGGAATGATACTGGCGTGAGCGGCACCGGCCTGCTGCTGCTCGGTGGTCTGCTGGCTCTGGCCCTGAATCAGAA TGCCCGCCGCAGCCTGGTAGGCGGCACCCGGACTCTGCTGGACAGCGCGCAGGAGGCGTTGGACGACACCGTCAAACCTG CCTTGGCCAGCGTGGCCCATCAGGCGCAGCACGCCGCGCAGGTGGCGGCGCACCGGGGTGCCGAGACGCTGGAAACGCTG CGTGAGGAGGTCCCCAGCCGCACCCATGCGCTCCTGGAAAACGCCCAGGAGGCCGCTGGGAGCGTGGTGGGTAAGGTGGC AGACAAAGCCGCTGATCTCACCCGCGAGGTGCGCGGCGCTGTGAGGGAGACCCAAGAGATGGCTGAGGACCGGCGCCGCG AGGCGCGGCAGGCGCTGAAGCAGGTGCAGCGCCAGGCCAAGCATGATCTTGGAAAAGCGCGCCAGGTCGGGAGCAAGTTT GAGGCCAAGCTTCAAGATCGCCTGGCCCATCAGCGCCACGAGCTTGAGGAGAAGCTGGCCCGCGCTCGCCGTCATGCGGA GAAGGAACTGCGGCGCAGTCGGCGCCACTGGAACCCCGACAAGCTGGAACGCGCGGTCGAGAAGCAGGTGGCGTCCCTCA AGAAACAGACGGAACGTGAACTCGCCCGTTTGGACCGACAGGCTCAAGTCGGGATGAAACGGGCCCAGAGCGAGCCGGAA GGTGGCCGTGGGGGGCTGGTCACCCTGGTGCTGCTGGGCGCCGGGGCTGTGGTGCTCGCTCGGGTACCGGCAGCCCGCCA GGCGGTGCTGGACGCGGTGGGCAAGGTCAGCCCTGAGGCGGCGAACTGGCTACACCGGGTGGGTCGCAGTGCTCGCAATC TGGTGGGCAGCATGTGGTTGGAGCGGATGGAGGAACCTGCTCCGCCCGCGCCGGCTCCTGCCAGAGGCACACAGGCAGGT ACCGCCGGGGCGACGTGGGGTGCTTCCACAGAGCCGGGTGCCCCCGCAACCAGCGGGAGCAGCGCAGGCAACACAAATCA CAGCACTGCCGCCCAGGCACAGCCGAACCAGAGCGCGAGCCAGAACACCCCAGTCGGCCCCCAGAATCCCGTCAACAAGC CTCACTGA
Upstream 100 bases:
>100_bases TACGTTACGTTTTCCCCACACTCTCCAGCGCCAGGGCGGCGACAATGGGCCGCATGGTTCCCGGCCTGAGGACTGGGTGC GGGACGTGAAAGGAGCACCA
Downstream 100 bases:
>100_bases CAGCTGAGGCGATACGGTCACAGGGTAACAGGGAACAGTCAGCGCACGTCCTGTCTCCAGAGGGGGTCGAAAGGACGTGC GCTGCCACTTGGGTGGCCCG
Product: AlgP-related protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MTRNDTGVSGTGLLLLGGLLALALNQNARRSLVGGTRTLLDSAQEALDDTVKPALASVAHQAQHAAQVAAHRGAETLETL REEVPSRTHALLENAQEAAGSVVGKVADKAADLTREVRGAVRETQEMAEDRRREARQALKQVQRQAKHDLGKARQVGSKF EAKLQDRLAHQRHELEEKLARARRHAEKELRRSRRHWNPDKLERAVEKQVASLKKQTERELARLDRQAQVGMKRAQSEPE GGRGGLVTLVLLGAGAVVLARVPAARQAVLDAVGKVSPEAANWLHRVGRSARNLVGSMWLERMEEPAPPAPAPARGTQAG TAGATWGASTEPGAPATSGSSAGNTNHSTAAQAQPNQSASQNTPVGPQNPVNKPH
Sequences:
>Translated_375_residues MTRNDTGVSGTGLLLLGGLLALALNQNARRSLVGGTRTLLDSAQEALDDTVKPALASVAHQAQHAAQVAAHRGAETLETL REEVPSRTHALLENAQEAAGSVVGKVADKAADLTREVRGAVRETQEMAEDRRREARQALKQVQRQAKHDLGKARQVGSKF EAKLQDRLAHQRHELEEKLARARRHAEKELRRSRRHWNPDKLERAVEKQVASLKKQTERELARLDRQAQVGMKRAQSEPE GGRGGLVTLVLLGAGAVVLARVPAARQAVLDAVGKVSPEAANWLHRVGRSARNLVGSMWLERMEEPAPPAPAPARGTQAG TAGATWGASTEPGAPATSGSSAGNTNHSTAAQAQPNQSASQNTPVGPQNPVNKPH >Mature_374_residues TRNDTGVSGTGLLLLGGLLALALNQNARRSLVGGTRTLLDSAQEALDDTVKPALASVAHQAQHAAQVAAHRGAETLETLR EEVPSRTHALLENAQEAAGSVVGKVADKAADLTREVRGAVRETQEMAEDRRREARQALKQVQRQAKHDLGKARQVGSKFE AKLQDRLAHQRHELEEKLARARRHAEKELRRSRRHWNPDKLERAVEKQVASLKKQTERELARLDRQAQVGMKRAQSEPEG GRGGLVTLVLLGAGAVVLARVPAARQAVLDAVGKVSPEAANWLHRVGRSARNLVGSMWLERMEEPAPPAPAPARGTQAGT AGATWGASTEPGAPATSGSSAGNTNHSTAAQAQPNQSASQNTPVGPQNPVNKPH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40131; Mature: 39999
Theoretical pI: Translated: 11.12; Mature: 11.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRNDTGVSGTGLLLLGGLLALALNQNARRSLVGGTRTLLDSAQEALDDTVKPALASVAH CCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QAQHAAQVAAHRGAETLETLREEVPSRTHALLENAQEAAGSVVGKVADKAADLTREVRGA HHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRETQEMAEDRRREARQALKQVQRQAKHDLGKARQVGSKFEAKLQDRLAHQRHELEEKLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RARRHAEKELRRSRRHWNPDKLERAVEKQVASLKKQTERELARLDRQAQVGMKRAQSEPE HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GGRGGLVTLVLLGAGAVVLARVPAARQAVLDAVGKVSPEAANWLHRVGRSARNLVGSMWL CCCCHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH ERMEEPAPPAPAPARGTQAGTAGATWGASTEPGAPATSGSSAGNTNHSTAAQAQPNQSAS HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QNTPVGPQNPVNKPH CCCCCCCCCCCCCCC >Mature Secondary Structure TRNDTGVSGTGLLLLGGLLALALNQNARRSLVGGTRTLLDSAQEALDDTVKPALASVAH CCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QAQHAAQVAAHRGAETLETLREEVPSRTHALLENAQEAAGSVVGKVADKAADLTREVRGA HHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRETQEMAEDRRREARQALKQVQRQAKHDLGKARQVGSKFEAKLQDRLAHQRHELEEKLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RARRHAEKELRRSRRHWNPDKLERAVEKQVASLKKQTERELARLDRQAQVGMKRAQSEPE HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GGRGGLVTLVLLGAGAVVLARVPAARQAVLDAVGKVSPEAANWLHRVGRSARNLVGSMWL CCCCHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH ERMEEPAPPAPAPARGTQAGTAGATWGASTEPGAPATSGSSAGNTNHSTAAQAQPNQSAS HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QNTPVGPQNPVNKPH CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA