Definition Deinococcus geothermalis DSM 11300, complete genome.
Accession NC_008025
Length 2,467,205

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The map label for this gene is 94985295

Identifier: 94985295

GI number: 94985295

Start: 1266188

End: 1267315

Strand: Reverse

Name: 94985295

Synonym: Dgeo_1193

Alternate gene names: NA

Gene position: 1267315-1266188 (Counterclockwise)

Preceding gene: 94985299

Following gene: 94985294

Centisome position: 51.37

GC content: 68.09

Gene sequence:

>1128_bases
ATGACAAGGAATGATACTGGCGTGAGCGGCACCGGCCTGCTGCTGCTCGGTGGTCTGCTGGCTCTGGCCCTGAATCAGAA
TGCCCGCCGCAGCCTGGTAGGCGGCACCCGGACTCTGCTGGACAGCGCGCAGGAGGCGTTGGACGACACCGTCAAACCTG
CCTTGGCCAGCGTGGCCCATCAGGCGCAGCACGCCGCGCAGGTGGCGGCGCACCGGGGTGCCGAGACGCTGGAAACGCTG
CGTGAGGAGGTCCCCAGCCGCACCCATGCGCTCCTGGAAAACGCCCAGGAGGCCGCTGGGAGCGTGGTGGGTAAGGTGGC
AGACAAAGCCGCTGATCTCACCCGCGAGGTGCGCGGCGCTGTGAGGGAGACCCAAGAGATGGCTGAGGACCGGCGCCGCG
AGGCGCGGCAGGCGCTGAAGCAGGTGCAGCGCCAGGCCAAGCATGATCTTGGAAAAGCGCGCCAGGTCGGGAGCAAGTTT
GAGGCCAAGCTTCAAGATCGCCTGGCCCATCAGCGCCACGAGCTTGAGGAGAAGCTGGCCCGCGCTCGCCGTCATGCGGA
GAAGGAACTGCGGCGCAGTCGGCGCCACTGGAACCCCGACAAGCTGGAACGCGCGGTCGAGAAGCAGGTGGCGTCCCTCA
AGAAACAGACGGAACGTGAACTCGCCCGTTTGGACCGACAGGCTCAAGTCGGGATGAAACGGGCCCAGAGCGAGCCGGAA
GGTGGCCGTGGGGGGCTGGTCACCCTGGTGCTGCTGGGCGCCGGGGCTGTGGTGCTCGCTCGGGTACCGGCAGCCCGCCA
GGCGGTGCTGGACGCGGTGGGCAAGGTCAGCCCTGAGGCGGCGAACTGGCTACACCGGGTGGGTCGCAGTGCTCGCAATC
TGGTGGGCAGCATGTGGTTGGAGCGGATGGAGGAACCTGCTCCGCCCGCGCCGGCTCCTGCCAGAGGCACACAGGCAGGT
ACCGCCGGGGCGACGTGGGGTGCTTCCACAGAGCCGGGTGCCCCCGCAACCAGCGGGAGCAGCGCAGGCAACACAAATCA
CAGCACTGCCGCCCAGGCACAGCCGAACCAGAGCGCGAGCCAGAACACCCCAGTCGGCCCCCAGAATCCCGTCAACAAGC
CTCACTGA

Upstream 100 bases:

>100_bases
TACGTTACGTTTTCCCCACACTCTCCAGCGCCAGGGCGGCGACAATGGGCCGCATGGTTCCCGGCCTGAGGACTGGGTGC
GGGACGTGAAAGGAGCACCA

Downstream 100 bases:

>100_bases
CAGCTGAGGCGATACGGTCACAGGGTAACAGGGAACAGTCAGCGCACGTCCTGTCTCCAGAGGGGGTCGAAAGGACGTGC
GCTGCCACTTGGGTGGCCCG

Product: AlgP-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 374

Protein sequence:

>375_residues
MTRNDTGVSGTGLLLLGGLLALALNQNARRSLVGGTRTLLDSAQEALDDTVKPALASVAHQAQHAAQVAAHRGAETLETL
REEVPSRTHALLENAQEAAGSVVGKVADKAADLTREVRGAVRETQEMAEDRRREARQALKQVQRQAKHDLGKARQVGSKF
EAKLQDRLAHQRHELEEKLARARRHAEKELRRSRRHWNPDKLERAVEKQVASLKKQTERELARLDRQAQVGMKRAQSEPE
GGRGGLVTLVLLGAGAVVLARVPAARQAVLDAVGKVSPEAANWLHRVGRSARNLVGSMWLERMEEPAPPAPAPARGTQAG
TAGATWGASTEPGAPATSGSSAGNTNHSTAAQAQPNQSASQNTPVGPQNPVNKPH

Sequences:

>Translated_375_residues
MTRNDTGVSGTGLLLLGGLLALALNQNARRSLVGGTRTLLDSAQEALDDTVKPALASVAHQAQHAAQVAAHRGAETLETL
REEVPSRTHALLENAQEAAGSVVGKVADKAADLTREVRGAVRETQEMAEDRRREARQALKQVQRQAKHDLGKARQVGSKF
EAKLQDRLAHQRHELEEKLARARRHAEKELRRSRRHWNPDKLERAVEKQVASLKKQTERELARLDRQAQVGMKRAQSEPE
GGRGGLVTLVLLGAGAVVLARVPAARQAVLDAVGKVSPEAANWLHRVGRSARNLVGSMWLERMEEPAPPAPAPARGTQAG
TAGATWGASTEPGAPATSGSSAGNTNHSTAAQAQPNQSASQNTPVGPQNPVNKPH
>Mature_374_residues
TRNDTGVSGTGLLLLGGLLALALNQNARRSLVGGTRTLLDSAQEALDDTVKPALASVAHQAQHAAQVAAHRGAETLETLR
EEVPSRTHALLENAQEAAGSVVGKVADKAADLTREVRGAVRETQEMAEDRRREARQALKQVQRQAKHDLGKARQVGSKFE
AKLQDRLAHQRHELEEKLARARRHAEKELRRSRRHWNPDKLERAVEKQVASLKKQTERELARLDRQAQVGMKRAQSEPEG
GRGGLVTLVLLGAGAVVLARVPAARQAVLDAVGKVSPEAANWLHRVGRSARNLVGSMWLERMEEPAPPAPAPARGTQAGT
AGATWGASTEPGAPATSGSSAGNTNHSTAAQAQPNQSASQNTPVGPQNPVNKPH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40131; Mature: 39999

Theoretical pI: Translated: 11.12; Mature: 11.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRNDTGVSGTGLLLLGGLLALALNQNARRSLVGGTRTLLDSAQEALDDTVKPALASVAH
CCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAQHAAQVAAHRGAETLETLREEVPSRTHALLENAQEAAGSVVGKVADKAADLTREVRGA
HHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRETQEMAEDRRREARQALKQVQRQAKHDLGKARQVGSKFEAKLQDRLAHQRHELEEKLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RARRHAEKELRRSRRHWNPDKLERAVEKQVASLKKQTERELARLDRQAQVGMKRAQSEPE
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GGRGGLVTLVLLGAGAVVLARVPAARQAVLDAVGKVSPEAANWLHRVGRSARNLVGSMWL
CCCCHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
ERMEEPAPPAPAPARGTQAGTAGATWGASTEPGAPATSGSSAGNTNHSTAAQAQPNQSAS
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QNTPVGPQNPVNKPH
CCCCCCCCCCCCCCC
>Mature Secondary Structure 
TRNDTGVSGTGLLLLGGLLALALNQNARRSLVGGTRTLLDSAQEALDDTVKPALASVAH
CCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAQHAAQVAAHRGAETLETLREEVPSRTHALLENAQEAAGSVVGKVADKAADLTREVRGA
HHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRETQEMAEDRRREARQALKQVQRQAKHDLGKARQVGSKFEAKLQDRLAHQRHELEEKLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RARRHAEKELRRSRRHWNPDKLERAVEKQVASLKKQTERELARLDRQAQVGMKRAQSEPE
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GGRGGLVTLVLLGAGAVVLARVPAARQAVLDAVGKVSPEAANWLHRVGRSARNLVGSMWL
CCCCHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
ERMEEPAPPAPAPARGTQAGTAGATWGASTEPGAPATSGSSAGNTNHSTAAQAQPNQSAS
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QNTPVGPQNPVNKPH
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA