| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94985255
Identifier: 94985255
GI number: 94985255
Start: 1225862
End: 1226194
Strand: Reverse
Name: 94985255
Synonym: Dgeo_1153
Alternate gene names: NA
Gene position: 1226194-1225862 (Counterclockwise)
Preceding gene: 94985256
Following gene: 94985254
Centisome position: 49.7
GC content: 63.66
Gene sequence:
>333_bases ATGGCGACCCTGGAGATTGTCTGCCCCGTATGCGCGGAGGTGCTGGAACTCACCGACGCCGACCGTTCCGAGTTGCAGGT GGGCGACGTGATCGTCTGCGATTCTTGCAACGCCGAGATGGAAGTGACCCGCAACGGCCCCGGCCAGGAATTCGACCTGG TGCTGTTGGGCGTGCTGACCACCTGCCCAAGCTGCGGCGAGGAATTCGACGTCACCGATGAGATGCTGGAAGCGGCCCCC ACCATTCAGAACGTGGACGGCACTGTCGCCAGCGTCGTGACCTGCCCCCACTGCCGCGCCCAAATCGAGCTGGAATTCGA GGAGGTGGACTGA
Upstream 100 bases:
>100_bases GCGCGAGGCGCTGCGCGAAGGGAGCATCCTGGCCTTTTTCAAGAAGTATGGCCGTTTTCCAGGCGAACCGCCCGCAGAGA GCGGCCCGTAAACTGGGCGT
Downstream 100 bases:
>100_bases AATCAGTCTAGACAATACTGCGTGTAACTTTTTCCGTCATTTAACCTATCAAGTGCTAGGAGGAGATATGCCTATTGTTC AATTTGAAAACCCAGAGACG
Product: zinc finger, DHP-type
Products: NA
Alternate protein names: Zinc Finger DHP-Type
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MATLEIVCPVCAEVLELTDADRSELQVGDVIVCDSCNAEMEVTRNGPGQEFDLVLLGVLTTCPSCGEEFDVTDEMLEAAP TIQNVDGTVASVVTCPHCRAQIELEFEEVD
Sequences:
>Translated_110_residues MATLEIVCPVCAEVLELTDADRSELQVGDVIVCDSCNAEMEVTRNGPGQEFDLVLLGVLTTCPSCGEEFDVTDEMLEAAP TIQNVDGTVASVVTCPHCRAQIELEFEEVD >Mature_109_residues ATLEIVCPVCAEVLELTDADRSELQVGDVIVCDSCNAEMEVTRNGPGQEFDLVLLGVLTTCPSCGEEFDVTDEMLEAAPT IQNVDGTVASVVTCPHCRAQIELEFEEVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11837; Mature: 11706
Theoretical pI: Translated: 3.40; Mature: 3.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 10.0 %Cys+Met (Translated Protein) 7.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 9.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATLEIVCPVCAEVLELTDADRSELQVGDVIVCDSCNAEMEVTRNGPGQEFDLVLLGVLT CCCHHHHHHHHHHHHHHCCCCCCCEEECCEEEECCCCCCEEEECCCCCCCHHHHHHHHHH TCPSCGEEFDVTDEMLEAAPTIQNVDGTVASVVTCPHCRAQIELEFEEVD CCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHEEECCCCCEEEEEEEEECC >Mature Secondary Structure ATLEIVCPVCAEVLELTDADRSELQVGDVIVCDSCNAEMEVTRNGPGQEFDLVLLGVLT CCHHHHHHHHHHHHHHCCCCCCCEEECCEEEECCCCCCEEEECCCCCCCHHHHHHHHHH TCPSCGEEFDVTDEMLEAAPTIQNVDGTVASVVTCPHCRAQIELEFEEVD CCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHEEECCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA