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The map label for this gene is ypjH [H]

Identifier: 94985202

GI number: 94985202

Start: 1166773

End: 1167915

Strand: Reverse

Name: ypjH [H]

Synonym: Dgeo_1099

Alternate gene names: 94985202

Gene position: 1167915-1166773 (Counterclockwise)

Preceding gene: 94985204

Following gene: 94985191

Centisome position: 47.34

GC content: 67.8

Gene sequence:

>1143_bases
ATGGCGCCCATTGCAGAAAAGATTGCCGTGCTCTGCCACGCGGGGGCGGGGGGGTCGGGCGTGGTGGCGACTGAGCTGGG
ATTGAAAGTCGCGCAGGCCGGGCACGAGGTTCACTTTGTCGGCTCCGCCGTGCCCTTCCGCCTGGCCGGACACCGGGGCC
TGCGGGGACCGTTTTTCCACCAGGTCGGCGGGTTCGCCTACGCGCTGTTCGATCAGCCCTACCCCGAGCTGGCGGCCACC
AACACCCTCACCGAGGTGATTTTGGAGTATGGCGTGAACCTCACCCACGCGCACTACGCGATTCCGCACGCCACGGCAGC
CATTCACGCGCGGGCCATCACCGGTCGCAGCCGGGTGATCACGACGCTCCACGGCACCGACGTGACGCTGGTGGGTGCCG
AACCTGCCTTCCGGCACACCACCCGGCATGCCATCGAGCGCAGCGACCACGTGACCGCGGTCTCGCATTTCCTGGCAGAG
CAGACCCGCGAGGTGTTTGGTGTGGAGCGCGACATCGAGGTGATTCACAACTTTGTCGATTCGGCACGCTTCACGCGGGT
GACTGACCCCGCGGTGCGTGCCCGCTTCGCCCAGCCCGACGAGGCGCTGCTGGTCCACGTGAGCAATTTTCGTCCGGTCA
AGCGCGTAGAGGACGTGGTGCGGGTGTTTGCCCGCGTTGCCAGCGAGATCCCCGCCCGGCTGCTGATGGTCGGGGACGGT
CCCGAGCGGCCCCGCGCCCTGGAGCTGGCCGGGCAACTGGGTGTGATCGGACGCACCCAGTTCCTGGGATCCTTCCCGGA
TGTCGAGACGGTGCTGGGCATCAGCGACCTGTTTCTGCTGCCCAGCAGCAACGAGAGTTTCGGTCTGGCTGCCCTGGAGG
CCATGAGCTGTGAGGTCCCGGTGGTCGCTGCCCGCGCGGGCGGGATTCCGGAAGTCGTTGAGGACGGCGTGACCGGCTTT
CTTGCTCCAGTGGGCGACGTGGACGCGATGGCGGAGGCCGCACTGCGGGTGCTGCGTGACCGCGACCTGTACTTGGGCAT
GGGCGCAGCGGGCCGTCACGCGGCCCTCACCCGCTTTCATCCTGACCGCATTGTGCCGCTGTATCTCGCGGCCTACGCGC
GGACGGTGGCGCACACAGGGTGA

Upstream 100 bases:

>100_bases
CGACGGCAAGCATGATCCCGACTGTACGGGGAGCGGACGTACACAATTCTGACACTCGGCTGACGAGCTGCCGGAGCCAC
GCACCCTATACTCCGCAGCG

Downstream 100 bases:

>100_bases
GGTCAGGCCTCAGCGGCCCAGGTTGAGGGTCACGTCGACCGTGCCGTCCACGAAGGGGGCCACCTTCACGGCGCGGCCCA
CCTCGACGATGAAGGCGTTC

Product: glycosyl transferase, group 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 379

Protein sequence:

>380_residues
MAPIAEKIAVLCHAGAGGSGVVATELGLKVAQAGHEVHFVGSAVPFRLAGHRGLRGPFFHQVGGFAYALFDQPYPELAAT
NTLTEVILEYGVNLTHAHYAIPHATAAIHARAITGRSRVITTLHGTDVTLVGAEPAFRHTTRHAIERSDHVTAVSHFLAE
QTREVFGVERDIEVIHNFVDSARFTRVTDPAVRARFAQPDEALLVHVSNFRPVKRVEDVVRVFARVASEIPARLLMVGDG
PERPRALELAGQLGVIGRTQFLGSFPDVETVLGISDLFLLPSSNESFGLAALEAMSCEVPVVAARAGGIPEVVEDGVTGF
LAPVGDVDAMAEAALRVLRDRDLYLGMGAAGRHAALTRFHPDRIVPLYLAAYARTVAHTG

Sequences:

>Translated_380_residues
MAPIAEKIAVLCHAGAGGSGVVATELGLKVAQAGHEVHFVGSAVPFRLAGHRGLRGPFFHQVGGFAYALFDQPYPELAAT
NTLTEVILEYGVNLTHAHYAIPHATAAIHARAITGRSRVITTLHGTDVTLVGAEPAFRHTTRHAIERSDHVTAVSHFLAE
QTREVFGVERDIEVIHNFVDSARFTRVTDPAVRARFAQPDEALLVHVSNFRPVKRVEDVVRVFARVASEIPARLLMVGDG
PERPRALELAGQLGVIGRTQFLGSFPDVETVLGISDLFLLPSSNESFGLAALEAMSCEVPVVAARAGGIPEVVEDGVTGF
LAPVGDVDAMAEAALRVLRDRDLYLGMGAAGRHAALTRFHPDRIVPLYLAAYARTVAHTG
>Mature_379_residues
APIAEKIAVLCHAGAGGSGVVATELGLKVAQAGHEVHFVGSAVPFRLAGHRGLRGPFFHQVGGFAYALFDQPYPELAATN
TLTEVILEYGVNLTHAHYAIPHATAAIHARAITGRSRVITTLHGTDVTLVGAEPAFRHTTRHAIERSDHVTAVSHFLAEQ
TREVFGVERDIEVIHNFVDSARFTRVTDPAVRARFAQPDEALLVHVSNFRPVKRVEDVVRVFARVASEIPARLLMVGDGP
ERPRALELAGQLGVIGRTQFLGSFPDVETVLGISDLFLLPSSNESFGLAALEAMSCEVPVVAARAGGIPEVVEDGVTGFL
APVGDVDAMAEAALRVLRDRDLYLGMGAAGRHAALTRFHPDRIVPLYLAAYARTVAHTG

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17532709, Length=293, Percent_Identity=26.6211604095563, Blast_Score=64, Evalue=1e-10,
Organism=Saccharomyces cerevisiae, GI9755344, Length=357, Percent_Identity=25.7703081232493, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 40677; Mature: 40546

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPIAEKIAVLCHAGAGGSGVVATELGLKVAQAGHEVHFVGSAVPFRLAGHRGLRGPFFH
CCCHHHHHHHHEECCCCCCCEEHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCCCCHHH
QVGGFAYALFDQPYPELAATNTLTEVILEYGVNLTHAHYAIPHATAAIHARAITGRSRVI
HHCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEHEEECCCHHHHHHHHEECCCCEEE
TTLHGTDVTLVGAEPAFRHTTRHAIERSDHVTAVSHFLAEQTREVFGVERDIEVIHNFVD
EEEECCEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
SARFTRVTDPAVRARFAQPDEALLVHVSNFRPVKRVEDVVRVFARVASEIPARLLMVGDG
HHHCEECCCHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCC
PERPRALELAGQLGVIGRTQFLGSFPDVETVLGISDLFLLPSSNESFGLAALEAMSCEVP
CCCCHHHHHHHCCCCCCHHHHHCCCCCHHHHHCHHHEEEECCCCCCCCHHHHHHHCCCCC
VVAARAGGIPEVVEDGVTGFLAPVGDVDAMAEAALRVLRDRDLYLGMGAAGRHAALTRFH
EEEECCCCCHHHHHCCCCEEECCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCHHHEEEC
PDRIVPLYLAAYARTVAHTG
CCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
APIAEKIAVLCHAGAGGSGVVATELGLKVAQAGHEVHFVGSAVPFRLAGHRGLRGPFFH
CCHHHHHHHHEECCCCCCCEEHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCCCCHHH
QVGGFAYALFDQPYPELAATNTLTEVILEYGVNLTHAHYAIPHATAAIHARAITGRSRVI
HHCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEHEEECCCHHHHHHHHEECCCCEEE
TTLHGTDVTLVGAEPAFRHTTRHAIERSDHVTAVSHFLAEQTREVFGVERDIEVIHNFVD
EEEECCEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
SARFTRVTDPAVRARFAQPDEALLVHVSNFRPVKRVEDVVRVFARVASEIPARLLMVGDG
HHHCEECCCHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCC
PERPRALELAGQLGVIGRTQFLGSFPDVETVLGISDLFLLPSSNESFGLAALEAMSCEVP
CCCCHHHHHHHCCCCCCHHHHHCCCCCHHHHHCHHHEEEECCCCCCCCHHHHHHHCCCCC
VVAARAGGIPEVVEDGVTGFLAPVGDVDAMAEAALRVLRDRDLYLGMGAAGRHAALTRFH
EEEECCCCCHHHHHCCCCEEECCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCHHHEEEC
PDRIVPLYLAAYARTVAHTG
CCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]