| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is crp [C]
Identifier: 94985120
GI number: 94985120
Start: 1088822
End: 1089436
Strand: Reverse
Name: crp [C]
Synonym: Dgeo_1015
Alternate gene names: 94985120
Gene position: 1089436-1088822 (Counterclockwise)
Preceding gene: 94985121
Following gene: 94985119
Centisome position: 44.16
GC content: 65.37
Gene sequence:
>615_bases ATGACGCAGACCAACTCATCCCTCACCAAGACCTTTGTCGACACCGTCACCTACCGCCCCGGCGCCGTGATCCTGTACCC GGGCAAGAGCGACATGCTCTACCGCGTTGCTTCCGGCCTGGTGCGCGTGCACACGATGGATGACGACGGCAACGGCCTGA CCCTCCGCTACGTGAAGCCCGGCGAGTACTTTGGCGAGGAGGCGCTGGCGGGCGTGAACCGTGCCTATTTCGCGGAGGCC GTGACCGACTCCACCGTCGACGTCATCAACCCCGCCCTGATGACCGCCGAGGACAACCTCGTCGTGACCACCCATCTGGT CAAGACGCTGGAACGCGCCTACGAGAGCATCTACCGCCTGGTCGGCAAGCGGCTGCGTGCTCGCATCGCCGGGGAGCTGC TGGAGCTGAAGGATACGGCACTTGCCACCCAGCTCGACAGCGGCGAGACGATGATCTACGCCACCCACGACGAGCTGGCC GCCGCTGTCGGCTCCGTGCGCGAAACCGTCACCAAGGTCGTCGGCGAACTCAGCCGCGAGGGCGTGATCAGCGCTGGGTA CGGCAAGATCACCCTCAAAGACGAAAAGGCCCTGGCGGACATCGCCGCGGCGTAA
Upstream 100 bases:
>100_bases GAAACAAAACTGTTTACAAAATAGTGAGTTTGGATTACACTGTGACCTGTGCGGGGATGTCCCCCGGCTCTTCGAACCCA ACGCCCAGGAGGCGACCACA
Downstream 100 bases:
>100_bases CGCCCACCTCGCGCACAGACACCTCAGGCACAGACCGCTCGGCTCAACCCGGGCGGTTGTGTTGTTGTGGGCAGTTATGG TGGACGCGGCGACCGAATCC
Product: CRP/FNR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator Crp/Fnr Family; CRP/FNR Family Transcriptional Regulator; Crp/FNR Family Transcriptional Regulator; Crp Family Transcriptional Regulator; Nitrogen Regulator
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MTQTNSSLTKTFVDTVTYRPGAVILYPGKSDMLYRVASGLVRVHTMDDDGNGLTLRYVKPGEYFGEEALAGVNRAYFAEA VTDSTVDVINPALMTAEDNLVVTTHLVKTLERAYESIYRLVGKRLRARIAGELLELKDTALATQLDSGETMIYATHDELA AAVGSVRETVTKVVGELSREGVISAGYGKITLKDEKALADIAAA
Sequences:
>Translated_204_residues MTQTNSSLTKTFVDTVTYRPGAVILYPGKSDMLYRVASGLVRVHTMDDDGNGLTLRYVKPGEYFGEEALAGVNRAYFAEA VTDSTVDVINPALMTAEDNLVVTTHLVKTLERAYESIYRLVGKRLRARIAGELLELKDTALATQLDSGETMIYATHDELA AAVGSVRETVTKVVGELSREGVISAGYGKITLKDEKALADIAAA >Mature_203_residues TQTNSSLTKTFVDTVTYRPGAVILYPGKSDMLYRVASGLVRVHTMDDDGNGLTLRYVKPGEYFGEEALAGVNRAYFAEAV TDSTVDVINPALMTAEDNLVVTTHLVKTLERAYESIYRLVGKRLRARIAGELLELKDTALATQLDSGETMIYATHDELAA AVGSVRETVTKVVGELSREGVISAGYGKITLKDEKALADIAAA
Specific function: This Protein Complexes With Cyclic AMP And Binds To Specific DNA Sites Near The Promoter To Regulate The Transcription Of Several Catabolite-Sensitive Operons. The Protein Induces A Severe Bend In The DNA. Acts As A Negative Regulator Of Its Own Synthesi
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22052; Mature: 21921
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTNSSLTKTFVDTVTYRPGAVILYPGKSDMLYRVASGLVRVHTMDDDGNGLTLRYVKP CCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCEEEEEEECCCCCCEEEEEECC GEYFGEEALAGVNRAYFAEAVTDSTVDVINPALMTAEDNLVVTTHLVKTLERAYESIYRL CHHHCHHHHHHCHHHHHHHHHCCCHHHHHCCHHEECCCCEEEHHHHHHHHHHHHHHHHHH VGKRLRARIAGELLELKDTALATQLDSGETMIYATHDELAAAVGSVRETVTKVVGELSRE HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHC GVISAGYGKITLKDEKALADIAAA CCEECCCCEEEEECHHHHHHHHCC >Mature Secondary Structure TQTNSSLTKTFVDTVTYRPGAVILYPGKSDMLYRVASGLVRVHTMDDDGNGLTLRYVKP CCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCEEEEEEECCCCCCEEEEEECC GEYFGEEALAGVNRAYFAEAVTDSTVDVINPALMTAEDNLVVTTHLVKTLERAYESIYRL CHHHCHHHHHHCHHHHHHHHHCCCHHHHHCCHHEECCCCEEEHHHHHHHHHHHHHHHHHH VGKRLRARIAGELLELKDTALATQLDSGETMIYATHDELAAAVGSVRETVTKVVGELSRE HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHC GVISAGYGKITLKDEKALADIAAA CCEECCCCEEEEECHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA