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The map label for this gene is nudL [H]

Identifier: 94984922

GI number: 94984922

Start: 871452

End: 872024

Strand: Reverse

Name: nudL [H]

Synonym: Dgeo_0815

Alternate gene names: 94984922

Gene position: 872024-871452 (Counterclockwise)

Preceding gene: 94984923

Following gene: 94984917

Centisome position: 35.34

GC content: 69.63

Gene sequence:

>573_bases
GTGAGAGAACCTGATCCCCTCGACCGCGCGCTGGACGATCCCTGGGCGGTGTGGTTGGGGAGCCGCACCCGCACGCCCCT
GCATCTGCCCGGCTACCGCCGCGCCGCCGTGTTGGTTGCGCTGACCCGCGAACGCGACCCGCGCGTGCTGCTGACCGTCC
GTGCGGCAGACCTGCCCACCCACCGAGGCCAGATCAGCTTTCCAGGCGGCAGCCTGGAATCCTTTGAAACGCCTGTCCAG
GGCGCGCTGCGCGAGGCCGAGGAGGAGGTGGGCCTCGATCCTCAGTCGGTCACGGTGCTGGGCGAGCTGGACGACGTATT
TACGCCGGTTGGCTTTCACGTCACGCCGGTGCTGGGGCGCGTTCCTGCCGAACCCAGGCTCACGCTCACGGCCGAGGTCG
CGCAGATCATCATGCCCACGCTGGGCGAGCTGCGCGCCGCGCCCCTCGTGCGCGAAACCCGCACGCTTCCGAATGGCCAG
CAGGCGCCGGTCTACCACTATCCCTGGCGCGGCCACGACATCTGGGGCATGACCGCCCGTGTGTTGCACGACCTCTTGAC
GCACGGGCCCTAA

Upstream 100 bases:

>100_bases
TGGTCGCGTGGGCCCGCCGCCTAGGGATCGATGCTGAGGTGGCGCTGCGCGAGCGCACCCAGGCCGCCCTCGCTGCGCGG
CCCGACCCGGAGGTCGGCGG

Downstream 100 bases:

>100_bases
CCAACAACGCCACCCCCACCGCACGGGTGGGGGTGCTGAGACCAGCGGGCCGCTTAGCGAGTGGGCGTGATGGTGATCTG
GCCGTTGCGCTGCACGTTGT

Product: NUDIX hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MREPDPLDRALDDPWAVWLGSRTRTPLHLPGYRRAAVLVALTRERDPRVLLTVRAADLPTHRGQISFPGGSLESFETPVQ
GALREAEEEVGLDPQSVTVLGELDDVFTPVGFHVTPVLGRVPAEPRLTLTAEVAQIIMPTLGELRAAPLVRETRTLPNGQ
QAPVYHYPWRGHDIWGMTARVLHDLLTHGP

Sequences:

>Translated_190_residues
MREPDPLDRALDDPWAVWLGSRTRTPLHLPGYRRAAVLVALTRERDPRVLLTVRAADLPTHRGQISFPGGSLESFETPVQ
GALREAEEEVGLDPQSVTVLGELDDVFTPVGFHVTPVLGRVPAEPRLTLTAEVAQIIMPTLGELRAAPLVRETRTLPNGQ
QAPVYHYPWRGHDIWGMTARVLHDLLTHGP
>Mature_190_residues
MREPDPLDRALDDPWAVWLGSRTRTPLHLPGYRRAAVLVALTRERDPRVLLTVRAADLPTHRGQISFPGGSLESFETPVQ
GALREAEEEVGLDPQSVTVLGELDDVFTPVGFHVTPVLGRVPAEPRLTLTAEVAQIIMPTLGELRAAPLVRETRTLPNGQ
QAPVYHYPWRGHDIWGMTARVLHDLLTHGP

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1788115, Length=161, Percent_Identity=36.6459627329193, Blast_Score=61, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17536993, Length=157, Percent_Identity=32.484076433121, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI18859683, Length=163, Percent_Identity=35.5828220858896, Blast_Score=67, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR000059 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 21044; Mature: 21044

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREPDPLDRALDDPWAVWLGSRTRTPLHLPGYRRAAVLVALTRERDPRVLLTVRAADLPT
CCCCCCCHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCC
HRGQISFPGGSLESFETPVQGALREAEEEVGLDPQSVTVLGELDDVFTPVGFHVTPVLGR
CCCEEECCCCCCHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHCCCCCEECHHHHC
VPAEPRLTLTAEVAQIIMPTLGELRAAPLVRETRTLPNGQQAPVYHYPWRGHDIWGMTAR
CCCCCCEEEHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHH
VLHDLLTHGP
HHHHHHHCCC
>Mature Secondary Structure
MREPDPLDRALDDPWAVWLGSRTRTPLHLPGYRRAAVLVALTRERDPRVLLTVRAADLPT
CCCCCCCHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCC
HRGQISFPGGSLESFETPVQGALREAEEEVGLDPQSVTVLGELDDVFTPVGFHVTPVLGR
CCCEEECCCCCCHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHCCCCCEECHHHHC
VPAEPRLTLTAEVAQIIMPTLGELRAAPLVRETRTLPNGQQAPVYHYPWRGHDIWGMTAR
CCCCCCEEEHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHH
VLHDLLTHGP
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14528314 [H]