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The map label for this gene is yabN [H]

Identifier: 94984923

GI number: 94984923

Start: 872021

End: 872653

Strand: Reverse

Name: yabN [H]

Synonym: Dgeo_0816

Alternate gene names: 94984923

Gene position: 872653-872021 (Counterclockwise)

Preceding gene: 94984930

Following gene: 94984922

Centisome position: 35.37

GC content: 70.62

Gene sequence:

>633_bases
ATGCAAGACCTGCTCGATACCCTACGCCGACTGCGCGGTCCCGACGGCTGTCCTTGGGACCGCAAACAAACCCACGAATC
CCTGCGCCCCTATCTGCTGGAAGAGGCCGCCGAGGCTGTGGATGCCGTCAGCGAGGGGCCAGCGGCGCTGGCCGGCGAAC
TGGGCGACGTGCTCCTGCAAGTTGCCTTTCATGCCGTGATCGCGGAAGAGGAAGGCACCTTCACCTACGCGGATGTCGAG
CGGGGCATCGTGGAGAAGCTGATCCGGCGGCATCCCCACGTGTTCGGGAAGCTTCAGGTCTCGGGGGCAGACGAGGTGGT
GACGAACTGGGAGGCGATCAAGGCCGCCGAACGCGGTGGCCGTCCCCGCTCCGCCGCCGAGAGGGTGCCGGCGGCGCTGG
GCGCCCTGGCCCGCGAGACACAGGCACAGAAGTTGCTGGGGCGCGAGAAGACCGGGCGCGCGGGGGTGGAGGCCGCTCTC
TGCGCAGCCCCCGACACGGCGGAAGGAGTCACGGAGGTGCTGGTCGCTGTGGTCGCGTGGGCCCGCCGCCTAGGGATCGA
TGCTGAGGTGGCGCTGCGCGAGCGCACCCAGGCCGCCCTCGCTGCGCGGCCCGACCCGGAGGTCGGCGGGTGA

Upstream 100 bases:

>100_bases
AGAGGTTTGTTCATGGCGCACAGTTCAACACAGGCTGTCTGATGAACGGTGAATTGGCCGTGAGGGACACGCAGGGCACT
TGGGGCCGTAGCATGGACAG

Downstream 100 bases:

>100_bases
GAGAACCTGATCCCCTCGACCGCGCGCTGGACGATCCCTGGGCGGTGTGGTTGGGGAGCCGCACCCGCACGCCCCTGCAT
CTGCCCGGCTACCGCCGCGC

Product: nucleoside triphosphate pyrophosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MQDLLDTLRRLRGPDGCPWDRKQTHESLRPYLLEEAAEAVDAVSEGPAALAGELGDVLLQVAFHAVIAEEEGTFTYADVE
RGIVEKLIRRHPHVFGKLQVSGADEVVTNWEAIKAAERGGRPRSAAERVPAALGALARETQAQKLLGREKTGRAGVEAAL
CAAPDTAEGVTEVLVAVVAWARRLGIDAEVALRERTQAALAARPDPEVGG

Sequences:

>Translated_210_residues
MQDLLDTLRRLRGPDGCPWDRKQTHESLRPYLLEEAAEAVDAVSEGPAALAGELGDVLLQVAFHAVIAEEEGTFTYADVE
RGIVEKLIRRHPHVFGKLQVSGADEVVTNWEAIKAAERGGRPRSAAERVPAALGALARETQAQKLLGREKTGRAGVEAAL
CAAPDTAEGVTEVLVAVVAWARRLGIDAEVALRERTQAALAARPDPEVGG
>Mature_210_residues
MQDLLDTLRRLRGPDGCPWDRKQTHESLRPYLLEEAAEAVDAVSEGPAALAGELGDVLLQVAFHAVIAEEEGTFTYADVE
RGIVEKLIRRHPHVFGKLQVSGADEVVTNWEAIKAAERGGRPRSAAERVPAALGALARETQAQKLLGREKTGRAGVEAAL
CAAPDTAEGVTEVLVAVVAWARRLGIDAEVALRERTQAALAARPDPEVGG

Specific function: Unknown

COG id: COG1694

COG function: function code R; Predicted pyrophosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789144, Length=212, Percent_Identity=39.622641509434, Blast_Score=133, Evalue=7e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR004518
- InterPro:   IPR011551 [H]

Pfam domain/function: PF03819 MazG; PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 22453; Mature: 22453

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDLLDTLRRLRGPDGCPWDRKQTHESLRPYLLEEAAEAVDAVSEGPAALAGELGDVLLQ
CHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
VAFHAVIAEEEGTFTYADVERGIVEKLIRRHPHVFGKLQVSGADEVVTNWEAIKAAERGG
HHHHHHHHCCCCCEEHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCC
RPRSAAERVPAALGALARETQAQKLLGREKTGRAGVEAALCAAPDTAEGVTEVLVAVVAW
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHH
ARRLGIDAEVALRERTQAALAARPDPEVGG
HHHHCCCHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MQDLLDTLRRLRGPDGCPWDRKQTHESLRPYLLEEAAEAVDAVSEGPAALAGELGDVLLQ
CHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
VAFHAVIAEEEGTFTYADVERGIVEKLIRRHPHVFGKLQVSGADEVVTNWEAIKAAERGG
HHHHHHHHCCCCCEEHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCC
RPRSAAERVPAALGALARETQAQKLLGREKTGRAGVEAALCAAPDTAEGVTEVLVAVVAW
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHH
ARRLGIDAEVALRERTQAALAARPDPEVGG
HHHHCCCHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]