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The map label for this gene is yohK [H]

Identifier: 94984881

GI number: 94984881

Start: 835266

End: 835922

Strand: Reverse

Name: yohK [H]

Synonym: Dgeo_0774

Alternate gene names: 94984881

Gene position: 835922-835266 (Counterclockwise)

Preceding gene: 94984882

Following gene: 94984878

Centisome position: 33.88

GC content: 73.97

Gene sequence:

>657_bases
ATGACCTGGATGGCCCTCACCCTCCTCGCCTTTGCCCTCGGCGTGCTGGCCCAGGCGCGAGTGCGGCATCCACTGATGAA
TCCGACGCTGGTGGCGACAGTCCTGGTGGCGGGGGTGCTGCTGCTCACGCGCACGTCCTATGACCGGTACGCGGCGGAGG
TGCGGCCCATCTCGTTCCTGCTCGGCCCGGCGGTGGTGGCGCTGGCAGTGCCGCTGTACCGGCTGCGGGCGCTGCTCGCG
CGGGAGTGGCGGGCGCTGGTGATCGGCGGGACAGCGGGAACGCTGGTCGGCGTCGGCGCAGACCTCCTCCTGCCCCGCCT
GCTGGGGCTGAGTGCGCAGGCGCAGCGCTCCCTCATGACGGCCCCCGCTACCAGCCCAGTTGCGCTGCAACTTGCCCAGG
TCACGCACGCGCCACCCGCACTGGCGGCCACACTCGCCGTGCTGTCGGGCCTGCTGGGCGCGCTGGTGCTGCCACCCGTG
CTGACCCGCCTGGGCGTGCGGCACCCGCTGGCGCGCGGCGTTGCGCTGGGCAGCGTCGCCCATGGTATCGGCACCGCCCG
CGCCCGCGAGGAGAGCGAGCACACCGGGGCCGCGAGCAGCATCGGCATGGGCCTCGCGGCGCTGCTGGTGACGCTGGTGG
TGGCGCTGCTGGGGTAG

Upstream 100 bases:

>100_bases
GTGCGGGCGTGGCGGGGGTGCTGGCGTCACGGCTGGTGCGCGAGTAAGCACGTTCTGCCGTCCGTTTTGGCGAACCGTGG
AGAGCTGGTAGCTTTCTCCC

Downstream 100 bases:

>100_bases
GCAGGCTTACTGCGCAACCAGAATCTGCACGCTCTGCAACACGTCCGCCTCCGCCCCGGCAATTGGCGTCTCGCCGCTTT
GGCCGCTGGTTGCGGTCCGC

Product: LrgB-like protein protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MTWMALTLLAFALGVLAQARVRHPLMNPTLVATVLVAGVLLLTRTSYDRYAAEVRPISFLLGPAVVALAVPLYRLRALLA
REWRALVIGGTAGTLVGVGADLLLPRLLGLSAQAQRSLMTAPATSPVALQLAQVTHAPPALAATLAVLSGLLGALVLPPV
LTRLGVRHPLARGVALGSVAHGIGTARAREESEHTGAASSIGMGLAALLVTLVVALLG

Sequences:

>Translated_218_residues
MTWMALTLLAFALGVLAQARVRHPLMNPTLVATVLVAGVLLLTRTSYDRYAAEVRPISFLLGPAVVALAVPLYRLRALLA
REWRALVIGGTAGTLVGVGADLLLPRLLGLSAQAQRSLMTAPATSPVALQLAQVTHAPPALAATLAVLSGLLGALVLPPV
LTRLGVRHPLARGVALGSVAHGIGTARAREESEHTGAASSIGMGLAALLVTLVVALLG
>Mature_217_residues
TWMALTLLAFALGVLAQARVRHPLMNPTLVATVLVAGVLLLTRTSYDRYAAEVRPISFLLGPAVVALAVPLYRLRALLAR
EWRALVIGGTAGTLVGVGADLLLPRLLGLSAQAQRSLMTAPATSPVALQLAQVTHAPPALAATLAVLSGLLGALVLPPVL
TRLGVRHPLARGVALGSVAHGIGTARAREESEHTGAASSIGMGLAALLVTLVVALLG

Specific function: Unknown

COG id: COG1346

COG function: function code M; Putative effector of murein hydrolase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yohK (E.coli)/ywbG (IPA-22R) (B.subtilis) family [H]

Homologues:

Organism=Escherichia coli, GI1788464, Length=212, Percent_Identity=33.0188679245283, Blast_Score=110, Evalue=7e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005261
- InterPro:   IPR007300 [H]

Pfam domain/function: PF04172 LrgB [H]

EC number: NA

Molecular weight: Translated: 22347; Mature: 22216

Theoretical pI: Translated: 12.16; Mature: 12.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTWMALTLLAFALGVLAQARVRHPLMNPTLVATVLVAGVLLLTRTSYDRYAAEVRPISFL
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LGPAVVALAVPLYRLRALLAREWRALVIGGTAGTLVGVGADLLLPRLLGLSAQAQRSLMT
HHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHC
APATSPVALQLAQVTHAPPALAATLAVLSGLLGALVLPPVLTRLGVRHPLARGVALGSVA
CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
HGIGTARAREESEHTGAASSIGMGLAALLVTLVVALLG
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
TWMALTLLAFALGVLAQARVRHPLMNPTLVATVLVAGVLLLTRTSYDRYAAEVRPISFL
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LGPAVVALAVPLYRLRALLAREWRALVIGGTAGTLVGVGADLLLPRLLGLSAQAQRSLMT
HHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHC
APATSPVALQLAQVTHAPPALAATLAVLSGLLGALVLPPVLTRLGVRHPLARGVALGSVA
CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
HGIGTARAREESEHTGAASSIGMGLAALLVTLVVALLG
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 2575702 [H]