| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is ald [H]
Identifier: 94984878
GI number: 94984878
Start: 832810
End: 833916
Strand: Reverse
Name: ald [H]
Synonym: Dgeo_0771
Alternate gene names: 94984878
Gene position: 833916-832810 (Counterclockwise)
Preceding gene: 94984881
Following gene: 94984871
Centisome position: 33.8
GC content: 65.85
Gene sequence:
>1107_bases ATGAAGATTGGGCTTCCGAAGGAAATCAAGGTCAAGGAAAATCGAGTGGCACTCACGCCCGGTGGGGTTGCCACGCTGAT TCGGCGCGGGCATACGGTCACGGTAGAGCGTGGCGCGGGCGTCGGCAGCGGGATTCATGACAGCGAGTACGAGGCTGCGG GCGCCGTGTTGGGCACGGCAGCGGAAGCCTGGGCTGCCGAAATGGTGGTGAAGGTGAAGGAACCGGTCCCCAGCGAGTAC GCTTACCTCCGCCCTGACCTGCTGCTGTTCACGTACCTGCATCTGGCCGCCGACCGCCCGCTCACCGAGGCGCTGCTGGC GGCGGGCACGACGGCCGTTGCCTATGAGACGGTGCAGCTCGAAGACGGCAGTCTCCCCCTCCTGACCCCCATGTCCGAGG TCGCCGGACGCCTCAGCGTGCAGGCGGGTGCCTACTACCTCCAAAAGCCGGTGGGCGGACGTGGCGTGCTGCTTGGCGGC GTGCCGGGCGTACAGCCGGGGCACGTGCTGATCGTGGGCGGTGGGGTCGTCGGCACAAACGCCGCGAAAATGGCCATGGG GTTGGGGGCCAAGGTGACTGTGCTCGACGTGTCGCACCGCCGCCTGACCTATCTCGACGACGTATTCTTCGGCAAGCTCA CCACCATGATGAGCAGCGAAGCCAACATCCGCGCGCTGCTGCCCGAGACTGACCTCCTGATCGGCGCGGTGCTGATTCCC GGCGCCAAGGCCCCGCACCTCATCACTCGCGACATGCTGCCGCTGATGCAAGAAGGCAGCGTGATCGTCGATGTGGCGGT GGACCAAGGCGGCTGCGTGGAGACGATCCACCCCACCACCCACGACGACCCGACCTACGTGGTCGATGGCGTCATTCATT ACGGCGTGGCCAATATGCCCGGCGCGGTGCCGCGCACGAGTACCTTTGCCCTCACGAACGCCACCTTCCCCTATCTGCTG CTGCTCGCGGATCAGGGCACCGGGGCACTGTTCCGCAACCCGGCGCTGATGCGAGGATTGAACACCTACCGGGGCAAGCT GACCTATCAGGGCGTAGCAGAGGCGTTCGGAATGCCGTCCGTAGAGGCAGCAGCAGCGCTCGCGTAG
Upstream 100 bases:
>100_bases CTGCTCGGCAATCCTCAGCAGCAAACCTCCTGCTAGCATTGCGGCACATTCAGCAGGTCTAGGCGGCTCGGCAAGGCTGG CCGCGCAGCAGGAGTCAGGT
Downstream 100 bases:
>100_bases ACAGCGAGCAAGGAGCGCCGGCAGATGTTCTGAAGGCATTCAGAGCGTGCAGAAGGGGGACCGACGACCAATCGGTCCCC CACTCGAATGACAGGAACAA
Product: alanine dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MKIGLPKEIKVKENRVALTPGGVATLIRRGHTVTVERGAGVGSGIHDSEYEAAGAVLGTAAEAWAAEMVVKVKEPVPSEY AYLRPDLLLFTYLHLAADRPLTEALLAAGTTAVAYETVQLEDGSLPLLTPMSEVAGRLSVQAGAYYLQKPVGGRGVLLGG VPGVQPGHVLIVGGGVVGTNAAKMAMGLGAKVTVLDVSHRRLTYLDDVFFGKLTTMMSSEANIRALLPETDLLIGAVLIP GAKAPHLITRDMLPLMQEGSVIVDVAVDQGGCVETIHPTTHDDPTYVVDGVIHYGVANMPGAVPRTSTFALTNATFPYLL LLADQGTGALFRNPALMRGLNTYRGKLTYQGVAEAFGMPSVEAAAALA
Sequences:
>Translated_368_residues MKIGLPKEIKVKENRVALTPGGVATLIRRGHTVTVERGAGVGSGIHDSEYEAAGAVLGTAAEAWAAEMVVKVKEPVPSEY AYLRPDLLLFTYLHLAADRPLTEALLAAGTTAVAYETVQLEDGSLPLLTPMSEVAGRLSVQAGAYYLQKPVGGRGVLLGG VPGVQPGHVLIVGGGVVGTNAAKMAMGLGAKVTVLDVSHRRLTYLDDVFFGKLTTMMSSEANIRALLPETDLLIGAVLIP GAKAPHLITRDMLPLMQEGSVIVDVAVDQGGCVETIHPTTHDDPTYVVDGVIHYGVANMPGAVPRTSTFALTNATFPYLL LLADQGTGALFRNPALMRGLNTYRGKLTYQGVAEAFGMPSVEAAAALA >Mature_368_residues MKIGLPKEIKVKENRVALTPGGVATLIRRGHTVTVERGAGVGSGIHDSEYEAAGAVLGTAAEAWAAEMVVKVKEPVPSEY AYLRPDLLLFTYLHLAADRPLTEALLAAGTTAVAYETVQLEDGSLPLLTPMSEVAGRLSVQAGAYYLQKPVGGRGVLLGG VPGVQPGHVLIVGGGVVGTNAAKMAMGLGAKVTVLDVSHRRLTYLDDVFFGKLTTMMSSEANIRALLPETDLLIGAVLIP GAKAPHLITRDMLPLMQEGSVIVDVAVDQGGCVETIHPTTHDDPTYVVDGVIHYGVANMPGAVPRTSTFALTNATFPYLL LLADQGTGALFRNPALMRGLNTYRGKLTYQGVAEAFGMPSVEAAAALA
Specific function: May play a role in cell wall synthesis as L-alanine is an important constituent of the peptidoglycan layer [H]
COG id: COG0686
COG function: function code E; Alanine dehydrogenase
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AlaDH/PNT family [H]
Homologues:
Organism=Homo sapiens, GI122939155, Length=345, Percent_Identity=31.8840579710145, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI122939153, Length=345, Percent_Identity=31.8840579710145, Blast_Score=140, Evalue=2e-33, Organism=Escherichia coli, GI1787887, Length=378, Percent_Identity=30.1587301587302, Blast_Score=139, Evalue=3e-34, Organism=Caenorhabditis elegans, GI17550456, Length=365, Percent_Identity=30.6849315068493, Blast_Score=149, Evalue=2e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007698 - InterPro: IPR008142 - InterPro: IPR008143 - InterPro: IPR007886 - InterPro: IPR008141 [H]
Pfam domain/function: PF01262 AlaDh_PNT_C; PF05222 AlaDh_PNT_N [H]
EC number: =1.4.1.1 [H]
Molecular weight: Translated: 38503; Mature: 38503
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS00837 ALADH_PNT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIGLPKEIKVKENRVALTPGGVATLIRRGHTVTVERGAGVGSGIHDSEYEAAGAVLGTA CCCCCCCCEEEECCEEEECCCHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHH AEAWAAEMVVKVKEPVPSEYAYLRPDLLLFTYLHLAADRPLTEALLAAGTTAVAYETVQL HHHHHHHHHHEECCCCCCCHHHHCHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEEEEEE EDGSLPLLTPMSEVAGRLSVQAGAYYLQKPVGGRGVLLGGVPGVQPGHVLIVGGGVVGTN CCCCCCEECCHHHHHHHEEEECCCEEEECCCCCCEEEEECCCCCCCCEEEEECCCEECCC AAKMAMGLGAKVTVLDVSHRRLTYLDDVFFGKLTTMMSSEANIRALLPETDLLIGAVLIP HHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHEEEEEEEC GAKAPHLITRDMLPLMQEGSVIVDVAVDQGGCVETIHPTTHDDPTYVVDGVIHYGVANMP CCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCEEECCCCCCCCCCEEEHHHHHHCCCCCC GAVPRTSTFALTNATFPYLLLLADQGTGALFRNPALMRGLNTYRGKLTYQGVAEAFGMPS CCCCCCCEEEEECCCCEEEEEEECCCCCCEECCCHHHHCCHHHCCEEEECHHHHHHCCCC VEAAAALA HHHHHHCC >Mature Secondary Structure MKIGLPKEIKVKENRVALTPGGVATLIRRGHTVTVERGAGVGSGIHDSEYEAAGAVLGTA CCCCCCCCEEEECCEEEECCCHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHH AEAWAAEMVVKVKEPVPSEYAYLRPDLLLFTYLHLAADRPLTEALLAAGTTAVAYETVQL HHHHHHHHHHEECCCCCCCHHHHCHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEEEEEE EDGSLPLLTPMSEVAGRLSVQAGAYYLQKPVGGRGVLLGGVPGVQPGHVLIVGGGVVGTN CCCCCCEECCHHHHHHHEEEECCCEEEECCCCCCEEEEECCCCCCCCEEEEECCCEECCC AAKMAMGLGAKVTVLDVSHRRLTYLDDVFFGKLTTMMSSEANIRALLPETDLLIGAVLIP HHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHEEEEEEEC GAKAPHLITRDMLPLMQEGSVIVDVAVDQGGCVETIHPTTHDDPTYVVDGVIHYGVANMP CCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCEEECCCCCCCCCCEEEHHHHHHCCCCCC GAVPRTSTFALTNATFPYLLLLADQGTGALFRNPALMRGLNTYRGKLTYQGVAEAFGMPS CCCCCCCEEEEECCCCEEEEEEECCCCCCEECCCHHHHCCHHHCCEEEECHHHHHHCCCC VEAAAALA HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA