| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94984882
Identifier: 94984882
GI number: 94984882
Start: 835976
End: 836362
Strand: Reverse
Name: 94984882
Synonym: Dgeo_0775
Alternate gene names: NA
Gene position: 836362-835976 (Counterclockwise)
Preceding gene: 94984883
Following gene: 94984881
Centisome position: 33.9
GC content: 70.8
Gene sequence:
>387_bases ATGAGTGGACCCGCTCCTGCCTCCGTCACCGGCAGGCTGCCCGCCCCGGTACGCCTCGTGCTGGGCCTGGGCCTCCTGAC CAGCTTCGCAGCGCTGGGAACGGCGCTGGTGACCAGCCTGCATCTTCCCCTGCCGGGATCAGTGGTCGGGATGGGTCTGC TGTGGGCAGCACTCTCGCTGCGCCTGGTGCGGCTCCACTGGCTCGAGGCCGCCGCCGACGGCCTGCTTGCCACCCTGGGC CTGCTCTTTGTTCCGGCCACCGTCGGTGTGATCGAGTACCTCTCGGCGGGTGCGGCTTGGGTGCTGTGGCTGCTGGTGAT GCTCACCGGGCTGCTGCTGGGTGCGGGCGTGGCGGGGGTGCTGGCGTCACGGCTGGTGCGCGAGTAA
Upstream 100 bases:
>100_bases ACGCGAACGTGGACTACCGGACCTTTATGCCGCTGGTCGCACGCCACGCCAAACAGGTCGTGCGCGGAATGCTGGCCCGC CTGGGGACCACCGCGCAGGC
Downstream 100 bases:
>100_bases GCACGTTCTGCCGTCCGTTTTGGCGAACCGTGGAGAGCTGGTAGCTTTCTCCCATGACCTGGATGGCCCTCACCCTCCTC GCCTTTGCCCTCGGCGTGCT
Product: LrgA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MSGPAPASVTGRLPAPVRLVLGLGLLTSFAALGTALVTSLHLPLPGSVVGMGLLWAALSLRLVRLHWLEAAADGLLATLG LLFVPATVGVIEYLSAGAAWVLWLLVMLTGLLLGAGVAGVLASRLVRE
Sequences:
>Translated_128_residues MSGPAPASVTGRLPAPVRLVLGLGLLTSFAALGTALVTSLHLPLPGSVVGMGLLWAALSLRLVRLHWLEAAADGLLATLG LLFVPATVGVIEYLSAGAAWVLWLLVMLTGLLLGAGVAGVLASRLVRE >Mature_127_residues SGPAPASVTGRLPAPVRLVLGLGLLTSFAALGTALVTSLHLPLPGSVVGMGLLWAALSLRLVRLHWLEAAADGLLATLGL LFVPATVGVIEYLSAGAAWVLWLLVMLTGLLLGAGVAGVLASRLVRE
Specific function: Unknown
COG id: COG1380
COG function: function code R; Putative effector of murein hydrolase LrgA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13010; Mature: 12879
Theoretical pI: Translated: 10.89; Mature: 10.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGPAPASVTGRLPAPVRLVLGLGLLTSFAALGTALVTSLHLPLPGSVVGMGLLWAALSL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH RLVRLHWLEAAADGLLATLGLLFVPATVGVIEYLSAGAAWVLWLLVMLTGLLLGAGVAGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH LASRLVRE HHHHHHCC >Mature Secondary Structure SGPAPASVTGRLPAPVRLVLGLGLLTSFAALGTALVTSLHLPLPGSVVGMGLLWAALSL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH RLVRLHWLEAAADGLLATLGLLFVPATVGVIEYLSAGAAWVLWLLVMLTGLLLGAGVAGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH LASRLVRE HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA