Definition Deinococcus geothermalis DSM 11300, complete genome.
Accession NC_008025
Length 2,467,205

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The map label for this gene is 94984882

Identifier: 94984882

GI number: 94984882

Start: 835976

End: 836362

Strand: Reverse

Name: 94984882

Synonym: Dgeo_0775

Alternate gene names: NA

Gene position: 836362-835976 (Counterclockwise)

Preceding gene: 94984883

Following gene: 94984881

Centisome position: 33.9

GC content: 70.8

Gene sequence:

>387_bases
ATGAGTGGACCCGCTCCTGCCTCCGTCACCGGCAGGCTGCCCGCCCCGGTACGCCTCGTGCTGGGCCTGGGCCTCCTGAC
CAGCTTCGCAGCGCTGGGAACGGCGCTGGTGACCAGCCTGCATCTTCCCCTGCCGGGATCAGTGGTCGGGATGGGTCTGC
TGTGGGCAGCACTCTCGCTGCGCCTGGTGCGGCTCCACTGGCTCGAGGCCGCCGCCGACGGCCTGCTTGCCACCCTGGGC
CTGCTCTTTGTTCCGGCCACCGTCGGTGTGATCGAGTACCTCTCGGCGGGTGCGGCTTGGGTGCTGTGGCTGCTGGTGAT
GCTCACCGGGCTGCTGCTGGGTGCGGGCGTGGCGGGGGTGCTGGCGTCACGGCTGGTGCGCGAGTAA

Upstream 100 bases:

>100_bases
ACGCGAACGTGGACTACCGGACCTTTATGCCGCTGGTCGCACGCCACGCCAAACAGGTCGTGCGCGGAATGCTGGCCCGC
CTGGGGACCACCGCGCAGGC

Downstream 100 bases:

>100_bases
GCACGTTCTGCCGTCCGTTTTGGCGAACCGTGGAGAGCTGGTAGCTTTCTCCCATGACCTGGATGGCCCTCACCCTCCTC
GCCTTTGCCCTCGGCGTGCT

Product: LrgA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MSGPAPASVTGRLPAPVRLVLGLGLLTSFAALGTALVTSLHLPLPGSVVGMGLLWAALSLRLVRLHWLEAAADGLLATLG
LLFVPATVGVIEYLSAGAAWVLWLLVMLTGLLLGAGVAGVLASRLVRE

Sequences:

>Translated_128_residues
MSGPAPASVTGRLPAPVRLVLGLGLLTSFAALGTALVTSLHLPLPGSVVGMGLLWAALSLRLVRLHWLEAAADGLLATLG
LLFVPATVGVIEYLSAGAAWVLWLLVMLTGLLLGAGVAGVLASRLVRE
>Mature_127_residues
SGPAPASVTGRLPAPVRLVLGLGLLTSFAALGTALVTSLHLPLPGSVVGMGLLWAALSLRLVRLHWLEAAADGLLATLGL
LFVPATVGVIEYLSAGAAWVLWLLVMLTGLLLGAGVAGVLASRLVRE

Specific function: Unknown

COG id: COG1380

COG function: function code R; Putative effector of murein hydrolase LrgA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13010; Mature: 12879

Theoretical pI: Translated: 10.89; Mature: 10.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGPAPASVTGRLPAPVRLVLGLGLLTSFAALGTALVTSLHLPLPGSVVGMGLLWAALSL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
RLVRLHWLEAAADGLLATLGLLFVPATVGVIEYLSAGAAWVLWLLVMLTGLLLGAGVAGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
LASRLVRE
HHHHHHCC
>Mature Secondary Structure 
SGPAPASVTGRLPAPVRLVLGLGLLTSFAALGTALVTSLHLPLPGSVVGMGLLWAALSL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
RLVRLHWLEAAADGLLATLGLLFVPATVGVIEYLSAGAAWVLWLLVMLTGLLLGAGVAGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
LASRLVRE
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA