| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is yhbJ [C]
Identifier: 94984830
GI number: 94984830
Start: 780789
End: 781688
Strand: Reverse
Name: yhbJ [C]
Synonym: Dgeo_0723
Alternate gene names: 94984830
Gene position: 781688-780789 (Counterclockwise)
Preceding gene: 94984831
Following gene: 94984829
Centisome position: 31.68
GC content: 66.89
Gene sequence:
>900_bases GTGAGGGCGCTGTGGAGGGCAGACGTCAGCGGCCTGCCCTCCCGCTACACTACCGCCATGCCGTTTGTGGTTGTGTCGGG CTTGTCAGGAAGCGGGAAGAGCACCGCGTTGCGGACATTGGAGGATGCGGGCTTTTTCATCACCGACAACCTGCCGCCCG AGCTGTGGGGGGCTATGCACGACCTGGCCACCGCGCGGGGACTGGAACGGGTGGCGGTGAGCACCGACGCACGCACTCGC TTTTTCCTGGGTGCGCTGGAGGACAGTTACCTGCGGCTTTCGCGACGGCGTGAGGATCTGCGGGTGCTGTTTCTGGAGGC CACGTCGGAGGTGCTGCTCCGGCGCTATAACCTGACGCGGCGCGAGCACCCGCTGGGTGAGACGCTGCTGGTGGATTTCG CGCGCGAACGCGAACTGCTGGCACCGCTGCGGGCGCTGGCCGACATCGTGATCGATACGACCGATCTCACGGCAGCCGAA CTCTCGCAAAAAGTGCTGCAGATGCTGCGCCTAGAACAAGACTTCCACCTGCGGCTGCTGAGTTTCGGGTTCAAGCACGC CCCACCACGCGACGCCGACCTGGTGATCGACGTGCGCTCGCTGCCCAACCCCTACTACGTCCCTGAGCTGCGCCCCCGCA CGGGTCTGGAACCCGCCGTGGCCGGTTATGTCTTTCGTGATGAGGCGTCCGAACAGTTCTACCGCGAGGTGCGGGACTTT GTGCGCCTGGCTGCTGGGCGAGCGCGGGCCGCCGGACGGCACGGCTACACGGTGGCCATCGGCTGCACGGGCGGACAGCA CCGCTCCGTGGCGGTGGCCGAAAGGTTGGCCGCCGACCTCACGGACCTTGGCGCGCAGGTCACCGACCACCGCGACATGC AGGTGGGAGAGGGCGGATGA
Upstream 100 bases:
>100_bases GCCGAGGATGACGCCGGGAATCTCGACTTGGTGGGCACGCGGCTGGACCTGCCGAGCGGAACGAAAGTGCGGTAGACCAA GGATCCGCTGCTCACCTCGT
Downstream 100 bases:
>100_bases ACGACCTGTCGCGCAAACGGGCGGAAGCCATGCGGGTGGGGGGCCGCCGCGCCCGCATGTGGCTCACGCCGGGCATGGGC GTGAAGCGCTGGCTGCTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MRALWRADVSGLPSRYTTAMPFVVVSGLSGSGKSTALRTLEDAGFFITDNLPPELWGAMHDLATARGLERVAVSTDARTR FFLGALEDSYLRLSRRREDLRVLFLEATSEVLLRRYNLTRREHPLGETLLVDFARERELLAPLRALADIVIDTTDLTAAE LSQKVLQMLRLEQDFHLRLLSFGFKHAPPRDADLVIDVRSLPNPYYVPELRPRTGLEPAVAGYVFRDEASEQFYREVRDF VRLAAGRARAAGRHGYTVAIGCTGGQHRSVAVAERLAADLTDLGAQVTDHRDMQVGEGG
Sequences:
>Translated_299_residues MRALWRADVSGLPSRYTTAMPFVVVSGLSGSGKSTALRTLEDAGFFITDNLPPELWGAMHDLATARGLERVAVSTDARTR FFLGALEDSYLRLSRRREDLRVLFLEATSEVLLRRYNLTRREHPLGETLLVDFARERELLAPLRALADIVIDTTDLTAAE LSQKVLQMLRLEQDFHLRLLSFGFKHAPPRDADLVIDVRSLPNPYYVPELRPRTGLEPAVAGYVFRDEASEQFYREVRDF VRLAAGRARAAGRHGYTVAIGCTGGQHRSVAVAERLAADLTDLGAQVTDHRDMQVGEGG >Mature_299_residues MRALWRADVSGLPSRYTTAMPFVVVSGLSGSGKSTALRTLEDAGFFITDNLPPELWGAMHDLATARGLERVAVSTDARTR FFLGALEDSYLRLSRRREDLRVLFLEATSEVLLRRYNLTRREHPLGETLLVDFARERELLAPLRALADIVIDTTDLTAAE LSQKVLQMLRLEQDFHLRLLSFGFKHAPPRDADLVIDVRSLPNPYYVPELRPRTGLEPAVAGYVFRDEASEQFYREVRDF VRLAAGRARAAGRHGYTVAIGCTGGQHRSVAVAERLAADLTDLGAQVTDHRDMQVGEGG
Specific function: Displays ATPase and GTPase activities [H]
COG id: COG1660
COG function: function code R; Predicted P-loop-containing kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0042 family [H]
Homologues:
Organism=Escherichia coli, GI1789598, Length=293, Percent_Identity=39.2491467576792, Blast_Score=178, Evalue=4e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005337 [H]
Pfam domain/function: PF03668 ATP_bind_2 [H]
EC number: NA
Molecular weight: Translated: 33334; Mature: 33334
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRALWRADVSGLPSRYTTAMPFVVVSGLSGSGKSTALRTLEDAGFFITDNLPPELWGAMH CCCCHHCCCCCCCCHHHHHCCCCEEECCCCCCCHHHHHHHHHCCEEEECCCCHHHHHHHH DLATARGLERVAVSTDARTRFFLGALEDSYLRLSRRREDLRVLFLEATSEVLLRRYNLTR HHHHHHCHHHHEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCC REHPLGETLLVDFARERELLAPLRALADIVIDTTDLTAAELSQKVLQMLRLEQDFHLRLL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHH SFGFKHAPPRDADLVIDVRSLPNPYYVPELRPRTGLEPAVAGYVFRDEASEQFYREVRDF HHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHEEEHHHHHHHHHHHHHHH VRLAAGRARAAGRHGYTVAIGCTGGQHRSVAVAERLAADLTDLGAQVTDHRDMQVGEGG HHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCC >Mature Secondary Structure MRALWRADVSGLPSRYTTAMPFVVVSGLSGSGKSTALRTLEDAGFFITDNLPPELWGAMH CCCCHHCCCCCCCCHHHHHCCCCEEECCCCCCCHHHHHHHHHCCEEEECCCCHHHHHHHH DLATARGLERVAVSTDARTRFFLGALEDSYLRLSRRREDLRVLFLEATSEVLLRRYNLTR HHHHHHCHHHHEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCC REHPLGETLLVDFARERELLAPLRALADIVIDTTDLTAAELSQKVLQMLRLEQDFHLRLL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHH SFGFKHAPPRDADLVIDVRSLPNPYYVPELRPRTGLEPAVAGYVFRDEASEQFYREVRDF HHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHEEEHHHHHHHHHHHHHHH VRLAAGRARAAGRHGYTVAIGCTGGQHRSVAVAERLAADLTDLGAQVTDHRDMQVGEGG HHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA