Definition Deinococcus geothermalis DSM 11300, complete genome.
Accession NC_008025
Length 2,467,205

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The map label for this gene is yhbJ [C]

Identifier: 94984830

GI number: 94984830

Start: 780789

End: 781688

Strand: Reverse

Name: yhbJ [C]

Synonym: Dgeo_0723

Alternate gene names: 94984830

Gene position: 781688-780789 (Counterclockwise)

Preceding gene: 94984831

Following gene: 94984829

Centisome position: 31.68

GC content: 66.89

Gene sequence:

>900_bases
GTGAGGGCGCTGTGGAGGGCAGACGTCAGCGGCCTGCCCTCCCGCTACACTACCGCCATGCCGTTTGTGGTTGTGTCGGG
CTTGTCAGGAAGCGGGAAGAGCACCGCGTTGCGGACATTGGAGGATGCGGGCTTTTTCATCACCGACAACCTGCCGCCCG
AGCTGTGGGGGGCTATGCACGACCTGGCCACCGCGCGGGGACTGGAACGGGTGGCGGTGAGCACCGACGCACGCACTCGC
TTTTTCCTGGGTGCGCTGGAGGACAGTTACCTGCGGCTTTCGCGACGGCGTGAGGATCTGCGGGTGCTGTTTCTGGAGGC
CACGTCGGAGGTGCTGCTCCGGCGCTATAACCTGACGCGGCGCGAGCACCCGCTGGGTGAGACGCTGCTGGTGGATTTCG
CGCGCGAACGCGAACTGCTGGCACCGCTGCGGGCGCTGGCCGACATCGTGATCGATACGACCGATCTCACGGCAGCCGAA
CTCTCGCAAAAAGTGCTGCAGATGCTGCGCCTAGAACAAGACTTCCACCTGCGGCTGCTGAGTTTCGGGTTCAAGCACGC
CCCACCACGCGACGCCGACCTGGTGATCGACGTGCGCTCGCTGCCCAACCCCTACTACGTCCCTGAGCTGCGCCCCCGCA
CGGGTCTGGAACCCGCCGTGGCCGGTTATGTCTTTCGTGATGAGGCGTCCGAACAGTTCTACCGCGAGGTGCGGGACTTT
GTGCGCCTGGCTGCTGGGCGAGCGCGGGCCGCCGGACGGCACGGCTACACGGTGGCCATCGGCTGCACGGGCGGACAGCA
CCGCTCCGTGGCGGTGGCCGAAAGGTTGGCCGCCGACCTCACGGACCTTGGCGCGCAGGTCACCGACCACCGCGACATGC
AGGTGGGAGAGGGCGGATGA

Upstream 100 bases:

>100_bases
GCCGAGGATGACGCCGGGAATCTCGACTTGGTGGGCACGCGGCTGGACCTGCCGAGCGGAACGAAAGTGCGGTAGACCAA
GGATCCGCTGCTCACCTCGT

Downstream 100 bases:

>100_bases
ACGACCTGTCGCGCAAACGGGCGGAAGCCATGCGGGTGGGGGGCCGCCGCGCCCGCATGTGGCTCACGCCGGGCATGGGC
GTGAAGCGCTGGCTGCTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MRALWRADVSGLPSRYTTAMPFVVVSGLSGSGKSTALRTLEDAGFFITDNLPPELWGAMHDLATARGLERVAVSTDARTR
FFLGALEDSYLRLSRRREDLRVLFLEATSEVLLRRYNLTRREHPLGETLLVDFARERELLAPLRALADIVIDTTDLTAAE
LSQKVLQMLRLEQDFHLRLLSFGFKHAPPRDADLVIDVRSLPNPYYVPELRPRTGLEPAVAGYVFRDEASEQFYREVRDF
VRLAAGRARAAGRHGYTVAIGCTGGQHRSVAVAERLAADLTDLGAQVTDHRDMQVGEGG

Sequences:

>Translated_299_residues
MRALWRADVSGLPSRYTTAMPFVVVSGLSGSGKSTALRTLEDAGFFITDNLPPELWGAMHDLATARGLERVAVSTDARTR
FFLGALEDSYLRLSRRREDLRVLFLEATSEVLLRRYNLTRREHPLGETLLVDFARERELLAPLRALADIVIDTTDLTAAE
LSQKVLQMLRLEQDFHLRLLSFGFKHAPPRDADLVIDVRSLPNPYYVPELRPRTGLEPAVAGYVFRDEASEQFYREVRDF
VRLAAGRARAAGRHGYTVAIGCTGGQHRSVAVAERLAADLTDLGAQVTDHRDMQVGEGG
>Mature_299_residues
MRALWRADVSGLPSRYTTAMPFVVVSGLSGSGKSTALRTLEDAGFFITDNLPPELWGAMHDLATARGLERVAVSTDARTR
FFLGALEDSYLRLSRRREDLRVLFLEATSEVLLRRYNLTRREHPLGETLLVDFARERELLAPLRALADIVIDTTDLTAAE
LSQKVLQMLRLEQDFHLRLLSFGFKHAPPRDADLVIDVRSLPNPYYVPELRPRTGLEPAVAGYVFRDEASEQFYREVRDF
VRLAAGRARAAGRHGYTVAIGCTGGQHRSVAVAERLAADLTDLGAQVTDHRDMQVGEGG

Specific function: Displays ATPase and GTPase activities [H]

COG id: COG1660

COG function: function code R; Predicted P-loop-containing kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0042 family [H]

Homologues:

Organism=Escherichia coli, GI1789598, Length=293, Percent_Identity=39.2491467576792, Blast_Score=178, Evalue=4e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005337 [H]

Pfam domain/function: PF03668 ATP_bind_2 [H]

EC number: NA

Molecular weight: Translated: 33334; Mature: 33334

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRALWRADVSGLPSRYTTAMPFVVVSGLSGSGKSTALRTLEDAGFFITDNLPPELWGAMH
CCCCHHCCCCCCCCHHHHHCCCCEEECCCCCCCHHHHHHHHHCCEEEECCCCHHHHHHHH
DLATARGLERVAVSTDARTRFFLGALEDSYLRLSRRREDLRVLFLEATSEVLLRRYNLTR
HHHHHHCHHHHEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCC
REHPLGETLLVDFARERELLAPLRALADIVIDTTDLTAAELSQKVLQMLRLEQDFHLRLL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHH
SFGFKHAPPRDADLVIDVRSLPNPYYVPELRPRTGLEPAVAGYVFRDEASEQFYREVRDF
HHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHEEEHHHHHHHHHHHHHHH
VRLAAGRARAAGRHGYTVAIGCTGGQHRSVAVAERLAADLTDLGAQVTDHRDMQVGEGG
HHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCC
>Mature Secondary Structure
MRALWRADVSGLPSRYTTAMPFVVVSGLSGSGKSTALRTLEDAGFFITDNLPPELWGAMH
CCCCHHCCCCCCCCHHHHHCCCCEEECCCCCCCHHHHHHHHHCCEEEECCCCHHHHHHHH
DLATARGLERVAVSTDARTRFFLGALEDSYLRLSRRREDLRVLFLEATSEVLLRRYNLTR
HHHHHHCHHHHEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCC
REHPLGETLLVDFARERELLAPLRALADIVIDTTDLTAAELSQKVLQMLRLEQDFHLRLL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHH
SFGFKHAPPRDADLVIDVRSLPNPYYVPELRPRTGLEPAVAGYVFRDEASEQFYREVRDF
HHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHEEEHHHHHHHHHHHHHHH
VRLAAGRARAAGRHGYTVAIGCTGGQHRSVAVAERLAADLTDLGAQVTDHRDMQVGEGG
HHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA