| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is metG [H]
Identifier: 94984831
GI number: 94984831
Start: 781714
End: 783726
Strand: Reverse
Name: metG [H]
Synonym: Dgeo_0724
Alternate gene names: 94984831
Gene position: 783726-781714 (Counterclockwise)
Preceding gene: 94984834
Following gene: 94984830
Centisome position: 31.77
GC content: 65.42
Gene sequence:
>2013_bases ATGACGAGACAGCCTGAGTCCACACAGAACGAGTTTTTTATTACGACCGCCATTGACTACGCCAACGGCGCGCCCCACAT CGGGCACGTGTACGAGAAGATCCTGGCGGACGCCCTGGCCCGCTACCACCGCCTTGCCGGGTACGACGTGACCTTTGTGA CCGGTACCGACGAACACGGCGAGAAGATCGCCAAGGCTGCCGCCAAGGCCGGGCAGACGCCCCAGACCTTCGTGGACGAC CTTTCCCTGCGGGCCTTCAAGGGCCTATGGGACCGCCTGGAGATCAGTTACGACGACTTTATCCGCACCACCGAAGGCCG CCACAAACGCTTCGTGGCAGAGATTCTCCAGCGCGTGTACGACGCGGGTGACATCTACTTCGCGGAGTACGAGGGCCTCT ACTCGGTCGGGGCCGAACGCTACGTGACCGAAAAGGAATTGGTGGAGGGCCCCGACGGCGTGCGCCGCTATCCCGGCGAC AAGGACCCGCCCGAGCTGCGGCGCGAGGCCAACTACTTCTTCCGGATGGAGAAATATCAGGACTGGCTGCGCGCGCACAT CGAGCAGAACCCCGACTTCATCCAGCCTGCCGGATACCGGAATGAGGTGCTCGAGATGCTGCGCGAGCCTATCGGGGACC TCTCCATCAGCCGCCCGAAAAGCCGTGTGCCGTGGGGCATCGAGCTGCCTTGGGACCCCGACCACGTGACCTACGTGTGG TTCGACGCGCTGCTGAACTACGTCTCGGCGCCGGTCAGCCGCGGGCTTGGCGAGGAGACCATCGGCAAGGCGTGGCATGT GATTGGCAAGGACATCCTCAAGCCGCACGCGGTCTTCTGGCCGACCATGCTGCGGGCGGCGGGATTGCCGATCTACCGCA AGCTGGTCGTCCACAGCCACATCCTCGCGGAGGACGGGCGCAAGATGGGCAAGTCACTCGGCAACGCCATCGACCCCGAA CAACTCGTGCGCGAGTACCCGGTGGACGCGATCCGCTACACACTGCTGCGTGAGGCCACGCTGAGTGCCGACAGTCCCTA CGGCGAGGGGATTCTGGTCTCGCGCCTGAATTCCGACTTGGCCAACGACCTGGGCAACCTGCTCTCCCGTACGGTGAGCA TGATCCAGAAGTACCGGGGCGGCGTTCTGCCGCAAGCGCTGGAGGTAGGAGAGCGTGAGCGTGAGGTCGAGGCGAAGGCG CTGGCCCTTCCCAGCGAGGTGATGACGCTGGTCCGCGATCTCAAGGTGAACATGGCGATTGAGACCGCAATGAACTTTGT GCGCGACCTCAACCGCTACATCGCAGAGAGTCAGCCGTGGAACCTCGCCAAATCGGAGGAGACGGCCCGCCGCCTGGACA CGGTGCTGTATACCGCCGCCGAGGGCCTGCGCGTGGCCAGCGTGGCGCTGGAAGCCGTGATTCCCGGCAAGGCCCGCGAA CTGCGCGCGCAGCTTGGCTTGGGCGGGCAGTCCTACGCGCTCAGGGGAGCCTGGGGCCTCACGCCCGCCGGAACGCGGGT GGTGGGCGGTCCGGTCCTCTTCCCCAAACCAGAACTGCCCAAACCCGAGGCCCCAGAAGCGGCCGCCACTCCACCCACCC CCAGAAAAGAGAAGACAACCGTGACCCCTCCCCGGAACGCTCAGGCCCCTGCCCCCACCCCCACCGCCACGCCCGCCGCC CCCGAAGCGCTCATCTCCATCGACGACTTCGCCCGGGTGGACCTGCGGATTGCGGAAGTTGTGGCCGCCGAGGCCGTCGA GAAGGCCGATAAGCTCCTCAAACTCACTGTGAAGATGGGTGACGAGACACGCACGGTCGTGAGCGGCATCCGCAAGTGGT TTGCGCCCGAAGATCTGGTGGGCCGCAAGGTGATCTTGGTGGCGAACCTCAAGCCCGCGCGGCTGCGCGGCATCGAGTCG CAGGGCATGATTCTGGCCGCCGAGGATGACGCCGGGAATCTCGACTTGGTGGGCACGCGGCTGGACCTGCCGAGCGGAAC GAAAGTGCGGTAG
Upstream 100 bases:
>100_bases CTTGTCTCAGACACTTTCCTGCGGCGCGTGATTTTTTCCGTATCTTTGGGAAGTTGCCTGGCCCTCCTCTCATCAGGGAC CGGCCAGGCGGGGAGCGGCC
Downstream 100 bases:
>100_bases ACCAAGGATCCGCTGCTCACCTCGTGTGAGGGCGCTGTGGAGGGCAGACGTCAGCGGCCTGCCCTCCCGCTACACTACCG CCATGCCGTTTGTGGTTGTG
Product: methionyl-tRNA synthetase
Products: NA
Alternate protein names: Methionine--tRNA ligase; MetRS [H]
Number of amino acids: Translated: 670; Mature: 669
Protein sequence:
>670_residues MTRQPESTQNEFFITTAIDYANGAPHIGHVYEKILADALARYHRLAGYDVTFVTGTDEHGEKIAKAAAKAGQTPQTFVDD LSLRAFKGLWDRLEISYDDFIRTTEGRHKRFVAEILQRVYDAGDIYFAEYEGLYSVGAERYVTEKELVEGPDGVRRYPGD KDPPELRREANYFFRMEKYQDWLRAHIEQNPDFIQPAGYRNEVLEMLREPIGDLSISRPKSRVPWGIELPWDPDHVTYVW FDALLNYVSAPVSRGLGEETIGKAWHVIGKDILKPHAVFWPTMLRAAGLPIYRKLVVHSHILAEDGRKMGKSLGNAIDPE QLVREYPVDAIRYTLLREATLSADSPYGEGILVSRLNSDLANDLGNLLSRTVSMIQKYRGGVLPQALEVGEREREVEAKA LALPSEVMTLVRDLKVNMAIETAMNFVRDLNRYIAESQPWNLAKSEETARRLDTVLYTAAEGLRVASVALEAVIPGKARE LRAQLGLGGQSYALRGAWGLTPAGTRVVGGPVLFPKPELPKPEAPEAAATPPTPRKEKTTVTPPRNAQAPAPTPTATPAA PEALISIDDFARVDLRIAEVVAAEAVEKADKLLKLTVKMGDETRTVVSGIRKWFAPEDLVGRKVILVANLKPARLRGIES QGMILAAEDDAGNLDLVGTRLDLPSGTKVR
Sequences:
>Translated_670_residues MTRQPESTQNEFFITTAIDYANGAPHIGHVYEKILADALARYHRLAGYDVTFVTGTDEHGEKIAKAAAKAGQTPQTFVDD LSLRAFKGLWDRLEISYDDFIRTTEGRHKRFVAEILQRVYDAGDIYFAEYEGLYSVGAERYVTEKELVEGPDGVRRYPGD KDPPELRREANYFFRMEKYQDWLRAHIEQNPDFIQPAGYRNEVLEMLREPIGDLSISRPKSRVPWGIELPWDPDHVTYVW FDALLNYVSAPVSRGLGEETIGKAWHVIGKDILKPHAVFWPTMLRAAGLPIYRKLVVHSHILAEDGRKMGKSLGNAIDPE QLVREYPVDAIRYTLLREATLSADSPYGEGILVSRLNSDLANDLGNLLSRTVSMIQKYRGGVLPQALEVGEREREVEAKA LALPSEVMTLVRDLKVNMAIETAMNFVRDLNRYIAESQPWNLAKSEETARRLDTVLYTAAEGLRVASVALEAVIPGKARE LRAQLGLGGQSYALRGAWGLTPAGTRVVGGPVLFPKPELPKPEAPEAAATPPTPRKEKTTVTPPRNAQAPAPTPTATPAA PEALISIDDFARVDLRIAEVVAAEAVEKADKLLKLTVKMGDETRTVVSGIRKWFAPEDLVGRKVILVANLKPARLRGIES QGMILAAEDDAGNLDLVGTRLDLPSGTKVR >Mature_669_residues TRQPESTQNEFFITTAIDYANGAPHIGHVYEKILADALARYHRLAGYDVTFVTGTDEHGEKIAKAAAKAGQTPQTFVDDL SLRAFKGLWDRLEISYDDFIRTTEGRHKRFVAEILQRVYDAGDIYFAEYEGLYSVGAERYVTEKELVEGPDGVRRYPGDK DPPELRREANYFFRMEKYQDWLRAHIEQNPDFIQPAGYRNEVLEMLREPIGDLSISRPKSRVPWGIELPWDPDHVTYVWF DALLNYVSAPVSRGLGEETIGKAWHVIGKDILKPHAVFWPTMLRAAGLPIYRKLVVHSHILAEDGRKMGKSLGNAIDPEQ LVREYPVDAIRYTLLREATLSADSPYGEGILVSRLNSDLANDLGNLLSRTVSMIQKYRGGVLPQALEVGEREREVEAKAL ALPSEVMTLVRDLKVNMAIETAMNFVRDLNRYIAESQPWNLAKSEETARRLDTVLYTAAEGLRVASVALEAVIPGKAREL RAQLGLGGQSYALRGAWGLTPAGTRVVGGPVLFPKPELPKPEAPEAAATPPTPRKEKTTVTPPRNAQAPAPTPTATPAAP EALISIDDFARVDLRIAEVVAAEAVEKADKLLKLTVKMGDETRTVVSGIRKWFAPEDLVGRKVILVANLKPARLRGIESQ GMILAAEDDAGNLDLVGTRLDLPSGTKVR
Specific function: Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation [H]
COG id: COG0143
COG function: function code J; Methionyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 tRNA-binding domain [H]
Homologues:
Organism=Homo sapiens, GI24308436, Length=510, Percent_Identity=36.8627450980392, Blast_Score=290, Evalue=3e-78, Organism=Homo sapiens, GI14043022, Length=596, Percent_Identity=25, Blast_Score=141, Evalue=2e-33, Organism=Homo sapiens, GI4507947, Length=137, Percent_Identity=33.5766423357664, Blast_Score=74, Evalue=4e-13, Organism=Escherichia coli, GI1788432, Length=688, Percent_Identity=28.4883720930233, Blast_Score=223, Evalue=3e-59, Organism=Escherichia coli, GI1789455, Length=107, Percent_Identity=33.6448598130841, Blast_Score=71, Evalue=3e-13, Organism=Caenorhabditis elegans, GI212645096, Length=492, Percent_Identity=35.5691056910569, Blast_Score=268, Evalue=6e-72, Organism=Caenorhabditis elegans, GI71992781, Length=385, Percent_Identity=33.2467532467532, Blast_Score=183, Evalue=3e-46, Organism=Caenorhabditis elegans, GI17540794, Length=534, Percent_Identity=26.2172284644195, Blast_Score=156, Evalue=3e-38, Organism=Saccharomyces cerevisiae, GI6321610, Length=530, Percent_Identity=32.6415094339623, Blast_Score=265, Evalue=2e-71, Organism=Saccharomyces cerevisiae, GI6321704, Length=422, Percent_Identity=25.1184834123223, Blast_Score=101, Evalue=4e-22, Organism=Drosophila melanogaster, GI21358483, Length=499, Percent_Identity=36.6733466933868, Blast_Score=297, Evalue=1e-80, Organism=Drosophila melanogaster, GI24655311, Length=536, Percent_Identity=25, Blast_Score=127, Evalue=2e-29,
Paralogues:
None
Copy number: 871 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015413 - InterPro: IPR004495 - InterPro: IPR014758 - InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR014729 - InterPro: IPR002547 - InterPro: IPR009080 [H]
Pfam domain/function: PF09334 tRNA-synt_1g; PF01588 tRNA_bind [H]
EC number: =6.1.1.10 [H]
Molecular weight: Translated: 74341; Mature: 74209
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: PS50886 TRBD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRQPESTQNEFFITTAIDYANGAPHIGHVYEKILADALARYHRLAGYDVTFVTGTDEHG CCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHH EKIAKAAAKAGQTPQTFVDDLSLRAFKGLWDRLEISYDDFIRTTEGRHKRFVAEILQRVY HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHH DAGDIYFAEYEGLYSVGAERYVTEKELVEGPDGVRRYPGDKDPPELRREANYFFRMEKYQ CCCCEEEEECCCHHHHCHHHHCCHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHH DWLRAHIEQNPDFIQPAGYRNEVLEMLREPIGDLSISRPKSRVPWGIELPWDPDHVTYVW HHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCHHHHH FDALLNYVSAPVSRGLGEETIGKAWHVIGKDILKPHAVFWPTMLRAAGLPIYRKLVVHSH HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHH ILAEDGRKMGKSLGNAIDPEQLVREYPVDAIRYTLLREATLSADSPYGEGILVSRLNSDL HHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHH ANDLGNLLSRTVSMIQKYRGGVLPQALEVGEREREVEAKALALPSEVMTLVRDLKVNMAI HHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH ETAMNFVRDLNRYIAESQPWNLAKSEETARRLDTVLYTAAEGLRVASVALEAVIPGKARE HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHH LRAQLGLGGQSYALRGAWGLTPAGTRVVGGPVLFPKPELPKPEAPEAAATPPTPRKEKTT HHHHHCCCCCCEEEECCCCCCCCCCEEECCCEECCCCCCCCCCCCCCCCCCCCCCCCCCC VTPPRNAQAPAPTPTATPAAPEALISIDDFARVDLRIAEVVAAEAVEKADKLLKLTVKMG CCCCCCCCCCCCCCCCCCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DETRTVVSGIRKWFAPEDLVGRKVILVANLKPARLRGIESQGMILAAEDDAGNLDLVGTR CCHHHHHHHHHHHCCCHHHCCCEEEEEECCCHHHHCCCCCCCEEEEECCCCCCEEEEEEE LDLPSGTKVR ECCCCCCCCC >Mature Secondary Structure TRQPESTQNEFFITTAIDYANGAPHIGHVYEKILADALARYHRLAGYDVTFVTGTDEHG CCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHH EKIAKAAAKAGQTPQTFVDDLSLRAFKGLWDRLEISYDDFIRTTEGRHKRFVAEILQRVY HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHH DAGDIYFAEYEGLYSVGAERYVTEKELVEGPDGVRRYPGDKDPPELRREANYFFRMEKYQ CCCCEEEEECCCHHHHCHHHHCCHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHH DWLRAHIEQNPDFIQPAGYRNEVLEMLREPIGDLSISRPKSRVPWGIELPWDPDHVTYVW HHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCHHHHH FDALLNYVSAPVSRGLGEETIGKAWHVIGKDILKPHAVFWPTMLRAAGLPIYRKLVVHSH HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHH ILAEDGRKMGKSLGNAIDPEQLVREYPVDAIRYTLLREATLSADSPYGEGILVSRLNSDL HHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHH ANDLGNLLSRTVSMIQKYRGGVLPQALEVGEREREVEAKALALPSEVMTLVRDLKVNMAI HHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH ETAMNFVRDLNRYIAESQPWNLAKSEETARRLDTVLYTAAEGLRVASVALEAVIPGKARE HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHH LRAQLGLGGQSYALRGAWGLTPAGTRVVGGPVLFPKPELPKPEAPEAAATPPTPRKEKTT HHHHHCCCCCCEEEECCCCCCCCCCEEECCCEECCCCCCCCCCCCCCCCCCCCCCCCCCC VTPPRNAQAPAPTPTATPAAPEALISIDDFARVDLRIAEVVAAEAVEKADKLLKLTVKMG CCCCCCCCCCCCCCCCCCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DETRTVVSGIRKWFAPEDLVGRKVILVANLKPARLRGIESQGMILAAEDDAGNLDLVGTR CCHHHHHHHHHHHCCCHHHCCCEEEEEECCCHHHHCCCCCCCEEEEECCCCCCEEEEEEE LDLPSGTKVR ECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10567266 [H]