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The map label for this gene is ybhK [C]

Identifier: 94984829

GI number: 94984829

Start: 779458

End: 780792

Strand: Reverse

Name: ybhK [C]

Synonym: Dgeo_0722

Alternate gene names: 94984829

Gene position: 780792-779458 (Counterclockwise)

Preceding gene: 94984830

Following gene: 94984825

Centisome position: 31.65

GC content: 69.66

Gene sequence:

>1335_bases
ATGAACGACCTGTCGCGCAAACGGGCGGAAGCCATGCGGGTGGGGGGCCGCCGCGCCCGCATGTGGCTCACGCCGGGCAT
GGGCGTGAAGCGCTGGCTGCTGCTGTTCGTCGTCTGTACGCTGATCGGCGCGGTGGGCTTCCTGCACTTCACTTGGACCG
GGCCGCTGCACTTCGTGGCCACCCGCTGGATTCTGTGGCTCAACGCCCTGACCGAGCCCAACATCATGCCGCTGTACGCG
GCGGGCATGAGCGTCATGGCCCTCGCGTTGGGAGGCGCTTTTCTCAGCATCGTGATGCTCAACCGCTCGATGCTGCGTTC
GACGGGGACCGCTCCAGAAACGGCGGTCGACCTGATCTATTCCCACCGCGCGCTGGCCCGTGGCCCCCGGATCGTGGCGG
TGGGCGGCGGCACCGGGCTATCGAACCTGCTGACCGGCCTCAAACACCACACCGCCAACCTCACCGCTATCGTGACGGTG
GCAGACAACGGCGGTTCCAGCGGGCGGCTGCGCGAGTCGCTGGACATGATCGCGCCCGGCGACCTGACCGACTGCTACGC
GGCGCTCTCGGACAGCCCGGTCCTGGCTCGGCTGCTGCTGCACCGCTTTGGCCGGGGCGAGGGGCTAGAGGGTCACACTT
TCGGCAATCTGCTGCTGGCGACCCTCAGCGAGGAACAGGGCGGGTTGCAAGGCGCAATGCGCGATGTGCACGAGGTTCTG
CGGGTGCGCGGACAGGTCTTTCCGGCCACGACCCTTCCTGTGACGCTGGTCGCGCACCTCTCCGACGGGCGCGAGGTCCG
CGGCGAGAGCGAACTGGCGCAGCAGGTCGGTAAGGCTCGGGTGGAGCGTGTCCGGCTTGACCCGCCCGACCCCCCTGCCC
TGCCTGCAGTGCTGGAGGCACTCCGAAGCGCCGAACTGATCGTCCTAGGCCCGGGAAGCCTCTTTACCAGCATCCTGCCC
GCGCTGCTGGTGCCCGGGATCGCCCAGGCGGTGCGCGCATCCGGCACGCCGGTCGTGTACGTCGCCAGCCTGATGTCCGA
ACCCGGCGAGACCACCGGTCTGACACTAGAAGACCACGTGAACGCGATCACCGCTCACCTGGGCCGCGCCCCCGACTGGG
TGCTGGTGAACAGCACGCCTATTCCGCCCGCCGTCCAGGCCCGCTACGCTGCCGAGGGCGCGCGAGTGCTGGACCTGCAG
GGCGCCAGCCCCGAGCTGCGGCGCCGCATTCGCCGCGCGCCCCTCCTGCAAGCCGGCAAGACTGCCCGCCACGACCCAGC
AGCCCTAGCTCAAGCCCTGCTGGCCCTGATCACCCGCACCCGCTCGGCGGCCTGA

Upstream 100 bases:

>100_bases
AGCACCGCTCCGTGGCGGTGGCCGAAAGGTTGGCCGCCGACCTCACGGACCTTGGCGCGCAGGTCACCGACCACCGCGAC
ATGCAGGTGGGAGAGGGCGG

Downstream 100 bases:

>100_bases
GCGCTTCAACCCGCTAAAATGACGACCCACCTCCCACCCGCACGCCCTGGTAGTAGGCGTAGGCCGCCGCGTAGCAAGGC
GGCTCCTGGTACCAGCTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MNDLSRKRAEAMRVGGRRARMWLTPGMGVKRWLLLFVVCTLIGAVGFLHFTWTGPLHFVATRWILWLNALTEPNIMPLYA
AGMSVMALALGGAFLSIVMLNRSMLRSTGTAPETAVDLIYSHRALARGPRIVAVGGGTGLSNLLTGLKHHTANLTAIVTV
ADNGGSSGRLRESLDMIAPGDLTDCYAALSDSPVLARLLLHRFGRGEGLEGHTFGNLLLATLSEEQGGLQGAMRDVHEVL
RVRGQVFPATTLPVTLVAHLSDGREVRGESELAQQVGKARVERVRLDPPDPPALPAVLEALRSAELIVLGPGSLFTSILP
ALLVPGIAQAVRASGTPVVYVASLMSEPGETTGLTLEDHVNAITAHLGRAPDWVLVNSTPIPPAVQARYAAEGARVLDLQ
GASPELRRRIRRAPLLQAGKTARHDPAALAQALLALITRTRSAA

Sequences:

>Translated_444_residues
MNDLSRKRAEAMRVGGRRARMWLTPGMGVKRWLLLFVVCTLIGAVGFLHFTWTGPLHFVATRWILWLNALTEPNIMPLYA
AGMSVMALALGGAFLSIVMLNRSMLRSTGTAPETAVDLIYSHRALARGPRIVAVGGGTGLSNLLTGLKHHTANLTAIVTV
ADNGGSSGRLRESLDMIAPGDLTDCYAALSDSPVLARLLLHRFGRGEGLEGHTFGNLLLATLSEEQGGLQGAMRDVHEVL
RVRGQVFPATTLPVTLVAHLSDGREVRGESELAQQVGKARVERVRLDPPDPPALPAVLEALRSAELIVLGPGSLFTSILP
ALLVPGIAQAVRASGTPVVYVASLMSEPGETTGLTLEDHVNAITAHLGRAPDWVLVNSTPIPPAVQARYAAEGARVLDLQ
GASPELRRRIRRAPLLQAGKTARHDPAALAQALLALITRTRSAA
>Mature_444_residues
MNDLSRKRAEAMRVGGRRARMWLTPGMGVKRWLLLFVVCTLIGAVGFLHFTWTGPLHFVATRWILWLNALTEPNIMPLYA
AGMSVMALALGGAFLSIVMLNRSMLRSTGTAPETAVDLIYSHRALARGPRIVAVGGGTGLSNLLTGLKHHTANLTAIVTV
ADNGGSSGRLRESLDMIAPGDLTDCYAALSDSPVLARLLLHRFGRGEGLEGHTFGNLLLATLSEEQGGLQGAMRDVHEVL
RVRGQVFPATTLPVTLVAHLSDGREVRGESELAQQVGKARVERVRLDPPDPPALPAVLEALRSAELIVLGPGSLFTSILP
ALLVPGIAQAVRASGTPVVYVASLMSEPGETTGLTLEDHVNAITAHLGRAPDWVLVNSTPIPPAVQARYAAEGARVLDLQ
GASPELRRRIRRAPLLQAGKTARHDPAALAQALLALITRTRSAA

Specific function: Unknown

COG id: COG0391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0052 family [H]

Homologues:

Organism=Escherichia coli, GI1786997, Length=270, Percent_Identity=35.9259259259259, Blast_Score=129, Evalue=5e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002882
- InterPro:   IPR010119 [H]

Pfam domain/function: PF01933 UPF0052 [H]

EC number: NA

Molecular weight: Translated: 47264; Mature: 47264

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDLSRKRAEAMRVGGRRARMWLTPGMGVKRWLLLFVVCTLIGAVGFLHFTWTGPLHFVA
CCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHH
TRWILWLNALTEPNIMPLYAAGMSVMALALGGAFLSIVMLNRSMLRSTGTAPETAVDLIY
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
SHRALARGPRIVAVGGGTGLSNLLTGLKHHTANLTAIVTVADNGGSSGRLRESLDMIAPG
HHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHCCCC
DLTDCYAALSDSPVLARLLLHRFGRGEGLEGHTFGNLLLATLSEEQGGLQGAMRDVHEVL
CHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCHHCCCHHHHHHHHHHHH
RVRGQVFPATTLPVTLVAHLSDGREVRGESELAQQVGKARVERVRLDPPDPPALPAVLEA
HHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHH
LRSAELIVLGPGSLFTSILPALLVPGIAQAVRASGTPVVYVASLMSEPGETTGLTLEDHV
HCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHH
NAITAHLGRAPDWVLVNSTPIPPAVQARYAAEGARVLDLQGASPELRRRIRRAPLLQAGK
HHHHHHHCCCCCEEEECCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCHHHCCC
TARHDPAALAQALLALITRTRSAA
CCCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNDLSRKRAEAMRVGGRRARMWLTPGMGVKRWLLLFVVCTLIGAVGFLHFTWTGPLHFVA
CCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHH
TRWILWLNALTEPNIMPLYAAGMSVMALALGGAFLSIVMLNRSMLRSTGTAPETAVDLIY
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
SHRALARGPRIVAVGGGTGLSNLLTGLKHHTANLTAIVTVADNGGSSGRLRESLDMIAPG
HHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHCCCC
DLTDCYAALSDSPVLARLLLHRFGRGEGLEGHTFGNLLLATLSEEQGGLQGAMRDVHEVL
CHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCHHCCCHHHHHHHHHHHH
RVRGQVFPATTLPVTLVAHLSDGREVRGESELAQQVGKARVERVRLDPPDPPALPAVLEA
HHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHH
LRSAELIVLGPGSLFTSILPALLVPGIAQAVRASGTPVVYVASLMSEPGETTGLTLEDHV
HCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHH
NAITAHLGRAPDWVLVNSTPIPPAVQARYAAEGARVLDLQGASPELRRRIRRAPLLQAGK
HHHHHHHCCCCCEEEECCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCHHHCCC
TARHDPAALAQALLALITRTRSAA
CCCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]