| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94984778
Identifier: 94984778
GI number: 94984778
Start: 729004
End: 729372
Strand: Reverse
Name: 94984778
Synonym: Dgeo_0671
Alternate gene names: NA
Gene position: 729372-729004 (Counterclockwise)
Preceding gene: 94984779
Following gene: 94984777
Centisome position: 29.56
GC content: 66.4
Gene sequence:
>369_bases ATGGGCTTTCTGATTCGGCTGCTGGTGAATGCGCTCGCGCTGTACCTGCTGACGCAGGTGTACGCGGGCGTCTCCTTCGC GCCGGGCACCGACGCGCTGAGTGTGCTTCTGGCGGCGCTGGTGCTGGGCATCGTGAACGCGCTGATCCGGCCGGTGCTGC TGCTGCTGAGTCTGCCGATCAACCTGCTCACCCTGGGTCTCTTCACGCTGGTGGTGAACGGGGTGGTGCTGTGGCTCGTC GCAAGCGTGACCGCGCTGGATGTGGCGGGCTTCGGGGCAGCCATTGTGGGCGCGCTGATCCTGGCCTTCATCAGCTGGGT GCTCGACGCCATCGTTGGGGCACTGGGCCTGAATGGGGGGCGCCATTGA
Upstream 100 bases:
>100_bases TGACTCCCCGGCAAGCACCGCTCCCCTGCGCCCCAATGAGGCGCGCATCATCCGCCGCCAGTAGTTCCTTCCGAGGCCCC CACAGGCTTATGCTCAGCGC
Downstream 100 bases:
>100_bases ACCGGACGGCGACGCGGGTCCTCAGCAGCATCGAGGAGGTCCGTGAGGCGCTGGCAGGGCCAGGCCGCGTGGGGCTGGTG CCCACGATGGGCTACCTGCA
Product: membrane protein of unknown function
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MGFLIRLLVNALALYLLTQVYAGVSFAPGTDALSVLLAALVLGIVNALIRPVLLLLSLPINLLTLGLFTLVVNGVVLWLV ASVTALDVAGFGAAIVGALILAFISWVLDAIVGALGLNGGRH
Sequences:
>Translated_122_residues MGFLIRLLVNALALYLLTQVYAGVSFAPGTDALSVLLAALVLGIVNALIRPVLLLLSLPINLLTLGLFTLVVNGVVLWLV ASVTALDVAGFGAAIVGALILAFISWVLDAIVGALGLNGGRH >Mature_121_residues GFLIRLLVNALALYLLTQVYAGVSFAPGTDALSVLLAALVLGIVNALIRPVLLLLSLPINLLTLGLFTLVVNGVVLWLVA SVTALDVAGFGAAIVGALILAFISWVLDAIVGALGLNGGRH
Specific function: Unknown
COG id: COG1950
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007165 [H]
Pfam domain/function: PF04020 DUF360 [H]
EC number: NA
Molecular weight: Translated: 12514; Mature: 12383
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFLIRLLVNALALYLLTQVYAGVSFAPGTDALSVLLAALVLGIVNALIRPVLLLLSLPI CHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLLTLGLFTLVVNGVVLWLVASVTALDVAGFGAAIVGALILAFISWVLDAIVGALGLNGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RH CC >Mature Secondary Structure GFLIRLLVNALALYLLTQVYAGVSFAPGTDALSVLLAALVLGIVNALIRPVLLLLSLPI HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLLTLGLFTLVVNGVVLWLVASVTALDVAGFGAAIVGALILAFISWVLDAIVGALGLNGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RH CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8550407; 12000953 [H]