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The map label for this gene is aglA [H]

Identifier: 94984779

GI number: 94984779

Start: 729409

End: 731010

Strand: Reverse

Name: aglA [H]

Synonym: Dgeo_0672

Alternate gene names: 94984779

Gene position: 731010-729409 (Counterclockwise)

Preceding gene: 94984780

Following gene: 94984778

Centisome position: 29.63

GC content: 67.54

Gene sequence:

>1602_bases
ATGACCCAGCCCAGCGAACTGAAGTGGTGGCAGCGCGGCATCATCTACCAGATTTACCCCCGGTCGTTTCAGGACGCCTC
CGGAGACGGAGTAGGGGACCTGCGCGGGATCACCTCCAGGCTGCCCTACGTGGCGGGCCTGGGGGTGGAGGCGGTGTGGC
TCTCCCCCATCTTCCGCAGCCCGATGCGCGACTTCGGCTATGACGTGGCCGATTACTGCGACATCGACCCCCTCTTCGGC
ACGCTGGAGGACTTCGATGCGCTGGTGGCCGAGGCGCACCGGTTGGGGCTGAAGGTGATGCTCGACTACGTGCCCAACCA
CACCTCCTCAGACCATCCCTGGTTCCAGGAGGCCCTTGCGGGCAAGGACAGTCCGAAGCGGGACTGGTACGTCTGGCGCG
ATCCGGCACCAGACGGCGGGCCGCCCAACAACTGGAAGTCATTTTTCGGGGGGGACGCCTGGACCTTCGATCCCCACAGC
GGCCAGTATTACCTGCATCAGTTTCTGCCGGGGCAGCCGGACCTGAACTGGCGCAACCCCGAGGTGCGCGCGGCAATGGC
GGACGTTCTGCGCTTCTGGATGCGCCGGGGCGTGGACGGCTTCCGGGTGGACGTGATCTGGCTGCTGGCCGAGGACGCCG
AGTTTCGCGACGAGCCGGAAAATCCTGAGTGGCAGCCGGGGCAGATCGAACACGCCCGTCTGCTGCACATCTACACCCAG
GACCAACCGGAGACGCACACCTATATCCGCGAGCTGCGGCAGGTGCTCGACGAGTTCGACGACCGCATGATGGTGGGAGA
AATTTACCTGCCGCTGAAGCAGCTGTTGCCCTACGCGGGCACGCCGGACGCGCCGATGGTGCATCTCCCCTTCAACTTCC
ACCTGATCCTGCTGCCCTGGGATGCCCGCGAGATTCGCGCCTTCGCGGACGAGTACGACGCGGCCTGCCGGGCGGCGGGC
ACCTGGCCGAACTGGGTGCTCGGCAACCACGACCAGCCCCGCTTCAAGTCGCGGGTGGGCGCAGACCAGTACCGGGTCGC
ACAGACGCTGCTGCTCACCCTGCGCGGCACCCCCACTGCCTACTACGGCGACGAAATCGGCATGCACGATGTCCCCATCC
CCCCCGAGCGGCGGATGGACCCGGCGGGCCTCCAGCAGCCCGACGTGCCGAGTGCGGGCCGCGATCCCGAGCGCACCCCG
ATGCAGTGGGACAGCGGCCCCAACGCGGGCTTCACAGCCCCCGACGTGCAACCCTGGCTTCCCCTGGCAGACGACGCTGA
CCGGGTGAACGTGCAGGTGGAGGAGGCAGACCCCACCAGCGACCTGAACTACTTCCGGGCACTCACAGCGCTGCGCCGCG
CCCATCCGGCGCTGGTGGCCGGTGACTACCGCTCGCTGGATACGGAACACGCGGACGTCTTCGCCTTCGAGCGGACGCTG
GCGGGGGAACAGCTGGTCGTGCTGCTGAATTTCGGCGGGGAGGAACGCGCGTTGGGGCCTCTTGTGGGCGAGGGACAGAC
CCTCCTGAGCAGCCGGAATGACTCCCCGGCAAGCACCGCTCCCCTGCGCCCCAATGAGGCGCGCATCATCCGCCGCCAGT
AG

Upstream 100 bases:

>100_bases
CCCCGCGCCGATAAGGCACGGCCTTCGCCGGAGGCCGTCGGGGAACCGATCGGGAACTGAATCGATTCAGTCGCCTGCTT
TTCCTGCTACGCTTTCAGGT

Downstream 100 bases:

>100_bases
TTCCTTCCGAGGCCCCCACAGGCTTATGCTCAGCGCATGGGCTTTCTGATTCGGCTGCTGGTGAATGCGCTCGCGCTGTA
CCTGCTGACGCAGGTGTACG

Product: alpha amylase, catalytic region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 533; Mature: 532

Protein sequence:

>533_residues
MTQPSELKWWQRGIIYQIYPRSFQDASGDGVGDLRGITSRLPYVAGLGVEAVWLSPIFRSPMRDFGYDVADYCDIDPLFG
TLEDFDALVAEAHRLGLKVMLDYVPNHTSSDHPWFQEALAGKDSPKRDWYVWRDPAPDGGPPNNWKSFFGGDAWTFDPHS
GQYYLHQFLPGQPDLNWRNPEVRAAMADVLRFWMRRGVDGFRVDVIWLLAEDAEFRDEPENPEWQPGQIEHARLLHIYTQ
DQPETHTYIRELRQVLDEFDDRMMVGEIYLPLKQLLPYAGTPDAPMVHLPFNFHLILLPWDAREIRAFADEYDAACRAAG
TWPNWVLGNHDQPRFKSRVGADQYRVAQTLLLTLRGTPTAYYGDEIGMHDVPIPPERRMDPAGLQQPDVPSAGRDPERTP
MQWDSGPNAGFTAPDVQPWLPLADDADRVNVQVEEADPTSDLNYFRALTALRRAHPALVAGDYRSLDTEHADVFAFERTL
AGEQLVVLLNFGGEERALGPLVGEGQTLLSSRNDSPASTAPLRPNEARIIRRQ

Sequences:

>Translated_533_residues
MTQPSELKWWQRGIIYQIYPRSFQDASGDGVGDLRGITSRLPYVAGLGVEAVWLSPIFRSPMRDFGYDVADYCDIDPLFG
TLEDFDALVAEAHRLGLKVMLDYVPNHTSSDHPWFQEALAGKDSPKRDWYVWRDPAPDGGPPNNWKSFFGGDAWTFDPHS
GQYYLHQFLPGQPDLNWRNPEVRAAMADVLRFWMRRGVDGFRVDVIWLLAEDAEFRDEPENPEWQPGQIEHARLLHIYTQ
DQPETHTYIRELRQVLDEFDDRMMVGEIYLPLKQLLPYAGTPDAPMVHLPFNFHLILLPWDAREIRAFADEYDAACRAAG
TWPNWVLGNHDQPRFKSRVGADQYRVAQTLLLTLRGTPTAYYGDEIGMHDVPIPPERRMDPAGLQQPDVPSAGRDPERTP
MQWDSGPNAGFTAPDVQPWLPLADDADRVNVQVEEADPTSDLNYFRALTALRRAHPALVAGDYRSLDTEHADVFAFERTL
AGEQLVVLLNFGGEERALGPLVGEGQTLLSSRNDSPASTAPLRPNEARIIRRQ
>Mature_532_residues
TQPSELKWWQRGIIYQIYPRSFQDASGDGVGDLRGITSRLPYVAGLGVEAVWLSPIFRSPMRDFGYDVADYCDIDPLFGT
LEDFDALVAEAHRLGLKVMLDYVPNHTSSDHPWFQEALAGKDSPKRDWYVWRDPAPDGGPPNNWKSFFGGDAWTFDPHSG
QYYLHQFLPGQPDLNWRNPEVRAAMADVLRFWMRRGVDGFRVDVIWLLAEDAEFRDEPENPEWQPGQIEHARLLHIYTQD
QPETHTYIRELRQVLDEFDDRMMVGEIYLPLKQLLPYAGTPDAPMVHLPFNFHLILLPWDAREIRAFADEYDAACRAAGT
WPNWVLGNHDQPRFKSRVGADQYRVAQTLLLTLRGTPTAYYGDEIGMHDVPIPPERRMDPAGLQQPDVPSAGRDPERTPM
QWDSGPNAGFTAPDVQPWLPLADDADRVNVQVEEADPTSDLNYFRALTALRRAHPALVAGDYRSLDTEHADVFAFERTLA
GEQLVVLLNFGGEERALGPLVGEGQTLLSSRNDSPASTAPLRPNEARIIRRQ

Specific function: Unknown

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI187423904, Length=503, Percent_Identity=37.375745526839, Blast_Score=343, Evalue=3e-94,
Organism=Homo sapiens, GI65506891, Length=108, Percent_Identity=37.037037037037, Blast_Score=77, Evalue=6e-14,
Organism=Homo sapiens, GI61744479, Length=108, Percent_Identity=37.037037037037, Blast_Score=77, Evalue=6e-14,
Organism=Homo sapiens, GI61744475, Length=108, Percent_Identity=37.037037037037, Blast_Score=77, Evalue=6e-14,
Organism=Homo sapiens, GI61744477, Length=108, Percent_Identity=37.037037037037, Blast_Score=76, Evalue=7e-14,
Organism=Homo sapiens, GI61744483, Length=108, Percent_Identity=37.037037037037, Blast_Score=76, Evalue=7e-14,
Organism=Homo sapiens, GI61744481, Length=108, Percent_Identity=37.037037037037, Blast_Score=76, Evalue=7e-14,
Organism=Escherichia coli, GI1790687, Length=558, Percent_Identity=39.6057347670251, Blast_Score=342, Evalue=4e-95,
Organism=Escherichia coli, GI1786604, Length=488, Percent_Identity=26.2295081967213, Blast_Score=108, Evalue=7e-25,
Organism=Escherichia coli, GI87081873, Length=252, Percent_Identity=25, Blast_Score=69, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI32565753, Length=529, Percent_Identity=25.5198487712665, Blast_Score=157, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI25147709, Length=515, Percent_Identity=27.1844660194175, Blast_Score=138, Evalue=8e-33,
Organism=Saccharomyces cerevisiae, GI6319776, Length=577, Percent_Identity=34.315424610052, Blast_Score=311, Evalue=1e-85,
Organism=Saccharomyces cerevisiae, GI6321731, Length=577, Percent_Identity=34.315424610052, Blast_Score=311, Evalue=1e-85,
Organism=Saccharomyces cerevisiae, GI6321726, Length=584, Percent_Identity=32.7054794520548, Blast_Score=310, Evalue=5e-85,
Organism=Saccharomyces cerevisiae, GI6324416, Length=584, Percent_Identity=33.5616438356164, Blast_Score=308, Evalue=2e-84,
Organism=Saccharomyces cerevisiae, GI6322241, Length=584, Percent_Identity=33.5616438356164, Blast_Score=306, Evalue=5e-84,
Organism=Saccharomyces cerevisiae, GI6322021, Length=584, Percent_Identity=33.5616438356164, Blast_Score=306, Evalue=5e-84,
Organism=Saccharomyces cerevisiae, GI6322245, Length=583, Percent_Identity=31.5608919382504, Blast_Score=294, Evalue=2e-80,
Organism=Drosophila melanogaster, GI24586589, Length=519, Percent_Identity=43.3526011560694, Blast_Score=391, Evalue=1e-109,
Organism=Drosophila melanogaster, GI24586593, Length=506, Percent_Identity=42.2924901185771, Blast_Score=382, Evalue=1e-106,
Organism=Drosophila melanogaster, GI24583745, Length=562, Percent_Identity=39.8576512455516, Blast_Score=377, Evalue=1e-104,
Organism=Drosophila melanogaster, GI24586599, Length=515, Percent_Identity=41.1650485436893, Blast_Score=367, Evalue=1e-101,
Organism=Drosophila melanogaster, GI24586591, Length=503, Percent_Identity=41.1530815109344, Blast_Score=363, Evalue=1e-100,
Organism=Drosophila melanogaster, GI24586587, Length=517, Percent_Identity=40.0386847195358, Blast_Score=361, Evalue=1e-100,
Organism=Drosophila melanogaster, GI45549022, Length=514, Percent_Identity=38.9105058365759, Blast_Score=360, Evalue=1e-99,
Organism=Drosophila melanogaster, GI24583747, Length=516, Percent_Identity=39.3410852713178, Blast_Score=353, Evalue=1e-97,
Organism=Drosophila melanogaster, GI24583749, Length=516, Percent_Identity=39.3410852713178, Blast_Score=353, Evalue=1e-97,
Organism=Drosophila melanogaster, GI24586597, Length=509, Percent_Identity=40.0785854616896, Blast_Score=342, Evalue=4e-94,
Organism=Drosophila melanogaster, GI221330053, Length=511, Percent_Identity=38.5518590998043, Blast_Score=336, Evalue=2e-92,
Organism=Drosophila melanogaster, GI281360393, Length=449, Percent_Identity=39.4209354120267, Blast_Score=300, Evalue=2e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR006589
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF00128 Alpha-amylase [H]

EC number: =3.2.1.20 [H]

Molecular weight: Translated: 60540; Mature: 60409

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQPSELKWWQRGIIYQIYPRSFQDASGDGVGDLRGITSRLPYVAGLGVEAVWLSPIFRS
CCCCHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCHHHCCCCHHHHHHHHHHH
PMRDFGYDVADYCDIDPLFGTLEDFDALVAEAHRLGLKVMLDYVPNHTSSDHPWFQEALA
HHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHC
GKDSPKRDWYVWRDPAPDGGPPNNWKSFFGGDAWTFDPHSGQYYLHQFLPGQPDLNWRNP
CCCCCCCCEEEECCCCCCCCCCCCHHHHCCCCCEEECCCCCCCHHEECCCCCCCCCCCCH
EVRAAMADVLRFWMRRGVDGFRVDVIWLLAEDAEFRDEPENPEWQPGQIEHARLLHIYTQ
HHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCHHCCCCCCCCCCCCCCCCEEEEEEEEC
DQPETHTYIRELRQVLDEFDDRMMVGEIYLPLKQLLPYAGTPDAPMVHLPFNFHLILLPW
CCCHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHCCCCCCCCCCEEEECCCEEEEEEEC
DAREIRAFADEYDAACRAAGTWPNWVLGNHDQPRFKSRVGADQYRVAQTLLLTLRGTPTA
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCE
YYGDEIGMHDVPIPPERRMDPAGLQQPDVPSAGRDPERTPMQWDSGPNAGFTAPDVQPWL
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PLADDADRVNVQVEEADPTSDLNYFRALTALRRAHPALVAGDYRSLDTEHADVFAFERTL
CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEECCCHHCCCCCHHHHHHHHHC
AGEQLVVLLNFGGEERALGPLVGEGQTLLSSRNDSPASTAPLRPNEARIIRRQ
CCCEEEEEEECCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEECC
>Mature Secondary Structure 
TQPSELKWWQRGIIYQIYPRSFQDASGDGVGDLRGITSRLPYVAGLGVEAVWLSPIFRS
CCCHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCHHHCCCCHHHHHHHHHHH
PMRDFGYDVADYCDIDPLFGTLEDFDALVAEAHRLGLKVMLDYVPNHTSSDHPWFQEALA
HHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHC
GKDSPKRDWYVWRDPAPDGGPPNNWKSFFGGDAWTFDPHSGQYYLHQFLPGQPDLNWRNP
CCCCCCCCEEEECCCCCCCCCCCCHHHHCCCCCEEECCCCCCCHHEECCCCCCCCCCCCH
EVRAAMADVLRFWMRRGVDGFRVDVIWLLAEDAEFRDEPENPEWQPGQIEHARLLHIYTQ
HHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCHHCCCCCCCCCCCCCCCCEEEEEEEEC
DQPETHTYIRELRQVLDEFDDRMMVGEIYLPLKQLLPYAGTPDAPMVHLPFNFHLILLPW
CCCHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHCCCCCCCCCCEEEECCCEEEEEEEC
DAREIRAFADEYDAACRAAGTWPNWVLGNHDQPRFKSRVGADQYRVAQTLLLTLRGTPTA
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCE
YYGDEIGMHDVPIPPERRMDPAGLQQPDVPSAGRDPERTPMQWDSGPNAGFTAPDVQPWL
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PLADDADRVNVQVEEADPTSDLNYFRALTALRRAHPALVAGDYRSLDTEHADVFAFERTL
CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEECCCHHCCCCCHHHHHHHHHC
AGEQLVVLLNFGGEERALGPLVGEGQTLLSSRNDSPASTAPLRPNEARIIRRQ
CCCEEEEEEECCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10400573; 11481430 [H]