Definition Deinococcus geothermalis DSM 11300, complete genome.
Accession NC_008025
Length 2,467,205

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The map label for this gene is yojG [H]

Identifier: 94984476

GI number: 94984476

Start: 374154

End: 374810

Strand: Reverse

Name: yojG [H]

Synonym: Dgeo_0368

Alternate gene names: 94984476

Gene position: 374810-374154 (Counterclockwise)

Preceding gene: 94984482

Following gene: 94984473

Centisome position: 15.19

GC content: 68.65

Gene sequence:

>657_bases
ATGAGCGAAACGCCGCTGAAACTCCTCTTGATCGTGCCGCACCCCGACGACGAGGTGTACGGGGCGGCGGGCACCCTGAT
GGACCTGCTCGACGAAGGGCACCCCTGCGGCCTGGTCACCCTCACGCGCGGCGAGGCGGGGCGCACGCTGGGGCTGTGTG
ATGGCCCGGAGGAACTCGCCCGGATGCGCGCCGCCGAGCTGCGGGCTTGCCTGGACGTGATCGGCCTGACCGTCCACGAG
CAGTTTGACTTTCCTGACAAGCACCTGGCGGAGCAGCCCTTTGGCCCGCTGGTGGAGGTGGCGCGTGAGGCGATGCGGCG
GCACCGCCCCGAGATCGTGCTCACCTTTCCGCCCAACGGCAGCAACGGTCATCCCGATCACGTGACCACCCACCGCGCGG
TGCGGGGGGCATGGGAGACCCTCCCGAAAGACGAGCGCCCGCGCCTGTGGTACTACGCCAGCGACACGCCTCCCGACAAC
GAGGCGCTGCGCGCTGCCTGGCTCCCCCCGAACATTCGCCGTGACGTCATGCACCACGTCACCCGCAAGCTCCAGGCCAT
CGCCTGTCACCGCACCCAGGCGCTCAGCACGGTAGATTTCATTCGCAAGTTCCCCGAGCGGATCACCCAGGAGACGTTCC
ACGAGGTGCGGGAGTAG

Upstream 100 bases:

>100_bases
GAAGGACAAAGTCGGCGCGGTTCATGGCCCCCATCCTGAACCGGACACGTCAGAGCCGCATCGGCCACAGCGCCTACCGC
CCGGCCCTATCCTGGGGCGC

Downstream 100 bases:

>100_bases
CGGCAAGAAAAAGGGCCTAGGGGCTTCCCAGGCCCTTTCTCCCGTTTACACCCACTCACTCACCGGAATGAATTCCACGC
CCTCGCCCTCGGTGGCGGTC

Product: LmbE-like protein protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MSETPLKLLLIVPHPDDEVYGAAGTLMDLLDEGHPCGLVTLTRGEAGRTLGLCDGPEELARMRAAELRACLDVIGLTVHE
QFDFPDKHLAEQPFGPLVEVAREAMRRHRPEIVLTFPPNGSNGHPDHVTTHRAVRGAWETLPKDERPRLWYYASDTPPDN
EALRAAWLPPNIRRDVMHHVTRKLQAIACHRTQALSTVDFIRKFPERITQETFHEVRE

Sequences:

>Translated_218_residues
MSETPLKLLLIVPHPDDEVYGAAGTLMDLLDEGHPCGLVTLTRGEAGRTLGLCDGPEELARMRAAELRACLDVIGLTVHE
QFDFPDKHLAEQPFGPLVEVAREAMRRHRPEIVLTFPPNGSNGHPDHVTTHRAVRGAWETLPKDERPRLWYYASDTPPDN
EALRAAWLPPNIRRDVMHHVTRKLQAIACHRTQALSTVDFIRKFPERITQETFHEVRE
>Mature_217_residues
SETPLKLLLIVPHPDDEVYGAAGTLMDLLDEGHPCGLVTLTRGEAGRTLGLCDGPEELARMRAAELRACLDVIGLTVHEQ
FDFPDKHLAEQPFGPLVEVAREAMRRHRPEIVLTFPPNGSNGHPDHVTTHRAVRGAWETLPKDERPRLWYYASDTPPDNE
ALRAAWLPPNIRRDVMHHVTRKLQAIACHRTQALSTVDFIRKFPERITQETFHEVRE

Specific function: Unknown

COG id: COG2120

COG function: function code S; Uncharacterized proteins, LmbE homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PIGL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003737 [H]

Pfam domain/function: PF02585 PIG-L [H]

EC number: NA

Molecular weight: Translated: 24692; Mature: 24561

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETPLKLLLIVPHPDDEVYGAAGTLMDLLDEGHPCGLVTLTRGEAGRTLGLCDGPEELA
CCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEECCCCCHHHHH
RMRAAELRACLDVIGLTVHEQFDFPDKHLAEQPFGPLVEVAREAMRRHRPEIVLTFPPNG
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEECCCC
SNGHPDHVTTHRAVRGAWETLPKDERPRLWYYASDTPPDNEALRAAWLPPNIRRDVMHHV
CCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHEEEECCCCHHHHHHHHHH
TRKLQAIACHRTQALSTVDFIRKFPERITQETFHEVRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SETPLKLLLIVPHPDDEVYGAAGTLMDLLDEGHPCGLVTLTRGEAGRTLGLCDGPEELA
CCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEECCCCCHHHHH
RMRAAELRACLDVIGLTVHEQFDFPDKHLAEQPFGPLVEVAREAMRRHRPEIVLTFPPNG
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEECCCC
SNGHPDHVTTHRAVRGAWETLPKDERPRLWYYASDTPPDNEALRAAWLPPNIRRDVMHHV
CCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHEEEECCCCHHHHHHHHHH
TRKLQAIACHRTQALSTVDFIRKFPERITQETFHEVRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377 [H]