| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
Click here to switch to the map view.
The map label for this gene is yojG [H]
Identifier: 94984476
GI number: 94984476
Start: 374154
End: 374810
Strand: Reverse
Name: yojG [H]
Synonym: Dgeo_0368
Alternate gene names: 94984476
Gene position: 374810-374154 (Counterclockwise)
Preceding gene: 94984482
Following gene: 94984473
Centisome position: 15.19
GC content: 68.65
Gene sequence:
>657_bases ATGAGCGAAACGCCGCTGAAACTCCTCTTGATCGTGCCGCACCCCGACGACGAGGTGTACGGGGCGGCGGGCACCCTGAT GGACCTGCTCGACGAAGGGCACCCCTGCGGCCTGGTCACCCTCACGCGCGGCGAGGCGGGGCGCACGCTGGGGCTGTGTG ATGGCCCGGAGGAACTCGCCCGGATGCGCGCCGCCGAGCTGCGGGCTTGCCTGGACGTGATCGGCCTGACCGTCCACGAG CAGTTTGACTTTCCTGACAAGCACCTGGCGGAGCAGCCCTTTGGCCCGCTGGTGGAGGTGGCGCGTGAGGCGATGCGGCG GCACCGCCCCGAGATCGTGCTCACCTTTCCGCCCAACGGCAGCAACGGTCATCCCGATCACGTGACCACCCACCGCGCGG TGCGGGGGGCATGGGAGACCCTCCCGAAAGACGAGCGCCCGCGCCTGTGGTACTACGCCAGCGACACGCCTCCCGACAAC GAGGCGCTGCGCGCTGCCTGGCTCCCCCCGAACATTCGCCGTGACGTCATGCACCACGTCACCCGCAAGCTCCAGGCCAT CGCCTGTCACCGCACCCAGGCGCTCAGCACGGTAGATTTCATTCGCAAGTTCCCCGAGCGGATCACCCAGGAGACGTTCC ACGAGGTGCGGGAGTAG
Upstream 100 bases:
>100_bases GAAGGACAAAGTCGGCGCGGTTCATGGCCCCCATCCTGAACCGGACACGTCAGAGCCGCATCGGCCACAGCGCCTACCGC CCGGCCCTATCCTGGGGCGC
Downstream 100 bases:
>100_bases CGGCAAGAAAAAGGGCCTAGGGGCTTCCCAGGCCCTTTCTCCCGTTTACACCCACTCACTCACCGGAATGAATTCCACGC CCTCGCCCTCGGTGGCGGTC
Product: LmbE-like protein protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MSETPLKLLLIVPHPDDEVYGAAGTLMDLLDEGHPCGLVTLTRGEAGRTLGLCDGPEELARMRAAELRACLDVIGLTVHE QFDFPDKHLAEQPFGPLVEVAREAMRRHRPEIVLTFPPNGSNGHPDHVTTHRAVRGAWETLPKDERPRLWYYASDTPPDN EALRAAWLPPNIRRDVMHHVTRKLQAIACHRTQALSTVDFIRKFPERITQETFHEVRE
Sequences:
>Translated_218_residues MSETPLKLLLIVPHPDDEVYGAAGTLMDLLDEGHPCGLVTLTRGEAGRTLGLCDGPEELARMRAAELRACLDVIGLTVHE QFDFPDKHLAEQPFGPLVEVAREAMRRHRPEIVLTFPPNGSNGHPDHVTTHRAVRGAWETLPKDERPRLWYYASDTPPDN EALRAAWLPPNIRRDVMHHVTRKLQAIACHRTQALSTVDFIRKFPERITQETFHEVRE >Mature_217_residues SETPLKLLLIVPHPDDEVYGAAGTLMDLLDEGHPCGLVTLTRGEAGRTLGLCDGPEELARMRAAELRACLDVIGLTVHEQ FDFPDKHLAEQPFGPLVEVAREAMRRHRPEIVLTFPPNGSNGHPDHVTTHRAVRGAWETLPKDERPRLWYYASDTPPDNE ALRAAWLPPNIRRDVMHHVTRKLQAIACHRTQALSTVDFIRKFPERITQETFHEVRE
Specific function: Unknown
COG id: COG2120
COG function: function code S; Uncharacterized proteins, LmbE homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PIGL family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003737 [H]
Pfam domain/function: PF02585 PIG-L [H]
EC number: NA
Molecular weight: Translated: 24692; Mature: 24561
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETPLKLLLIVPHPDDEVYGAAGTLMDLLDEGHPCGLVTLTRGEAGRTLGLCDGPEELA CCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEECCCCCHHHHH RMRAAELRACLDVIGLTVHEQFDFPDKHLAEQPFGPLVEVAREAMRRHRPEIVLTFPPNG HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEECCCC SNGHPDHVTTHRAVRGAWETLPKDERPRLWYYASDTPPDNEALRAAWLPPNIRRDVMHHV CCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHEEEECCCCHHHHHHHHHH TRKLQAIACHRTQALSTVDFIRKFPERITQETFHEVRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SETPLKLLLIVPHPDDEVYGAAGTLMDLLDEGHPCGLVTLTRGEAGRTLGLCDGPEELA CCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEECCCCCHHHHH RMRAAELRACLDVIGLTVHEQFDFPDKHLAEQPFGPLVEVAREAMRRHRPEIVLTFPPNG HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEECCCC SNGHPDHVTTHRAVRGAWETLPKDERPRLWYYASDTPPDNEALRAAWLPPNIRRDVMHHV CCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHEEEECCCCHHHHHHHHHH TRKLQAIACHRTQALSTVDFIRKFPERITQETFHEVRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9734814; 9384377 [H]