| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94984263
Identifier: 94984263
GI number: 94984263
Start: 144734
End: 145267
Strand: Reverse
Name: 94984263
Synonym: Dgeo_0155
Alternate gene names: NA
Gene position: 145267-144734 (Counterclockwise)
Preceding gene: 94984265
Following gene: 94984259
Centisome position: 5.89
GC content: 68.91
Gene sequence:
>534_bases ATGCCAGACCCACTCATCTTCACTGCCGGGACAGGCACTGAGGCGAACCCCGAACCGACCGAACCGGCCCCGGATGCGGG GAGCCGACCCTTCCAGCGCATCGCCGTCGGCATCGACTTTTCACCTGCCTCGCTGCACGCGCTGGACGTGACCCGCACGC GTTTCCCGGGAGCGCGGCTGCGGCTGCTGCACGTTACCGACGCTCGCGTGGCCACCACGCCCGACCTGGGAGGTGGTGTG ATTCCAACTGGACCCAGTTCAGCCTTGCTGCAGACGCTGGAGACGGCTGACGCCGACCGCCTGGCACAGCTGGCCCAAGG CAGCGAGGAGACCGAGCTGCTGGTGGGCGATCCAGTGACCGGGATTCTGGACGCCGCCGAGCGCTGGGGCGCCGAGCTGA TCGTGGTGGGCACCCACGCGCAAGGCGCCATTGAGCATTTCTTGCTGGGCAGCAGTGCCGAGAAGCTGATCTCCCGCAGC TCGGTCCCGGTTCTGACGGTCCGGCTTCCCCGCGCCCAGGCAGCCCGGCGCTGA
Upstream 100 bases:
>100_bases GACTTGCATGCACGCAGTGTGCGCCCTCCTGTTCCCGGGCAGACTTTACCCGCCCTTCAGACAGCGGGCAGAACGGCAGA GCACGGTGTAGGTTCGGCAC
Downstream 100 bases:
>100_bases GGATCTCCTGCTCTGCTCTCCGGCCTTCCCCGACCGCGCCGCCAGAAGACCCTGGCACCCTGGCCGCGCGGGTGAGGAGT GCCGCGGCTAGGGTGCCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: UspA Domain-Containing Protein; Universal Stress Protein
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MPDPLIFTAGTGTEANPEPTEPAPDAGSRPFQRIAVGIDFSPASLHALDVTRTRFPGARLRLLHVTDARVATTPDLGGGV IPTGPSSALLQTLETADADRLAQLAQGSEETELLVGDPVTGILDAAERWGAELIVVGTHAQGAIEHFLLGSSAEKLISRS SVPVLTVRLPRAQAARR
Sequences:
>Translated_177_residues MPDPLIFTAGTGTEANPEPTEPAPDAGSRPFQRIAVGIDFSPASLHALDVTRTRFPGARLRLLHVTDARVATTPDLGGGV IPTGPSSALLQTLETADADRLAQLAQGSEETELLVGDPVTGILDAAERWGAELIVVGTHAQGAIEHFLLGSSAEKLISRS SVPVLTVRLPRAQAARR >Mature_176_residues PDPLIFTAGTGTEANPEPTEPAPDAGSRPFQRIAVGIDFSPASLHALDVTRTRFPGARLRLLHVTDARVATTPDLGGGVI PTGPSSALLQTLETADADRLAQLAQGSEETELLVGDPVTGILDAAERWGAELIVVGTHAQGAIEHFLLGSSAEKLISRSS VPVLTVRLPRAQAARR
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18511; Mature: 18380
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDPLIFTAGTGTEANPEPTEPAPDAGSRPFQRIAVGIDFSPASLHALDVTRTRFPGARL CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCEE RLLHVTDARVATTPDLGGGVIPTGPSSALLQTLETADADRLAQLAQGSEETELLVGDPVT EEEEECCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCEEEECCCCH GILDAAERWGAELIVVGTHAQGAIEHFLLGSSAEKLISRSSVPVLTVRLPRAQAARR HHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCHHHHHHCCCCCEEEEECCCHHHCCC >Mature Secondary Structure PDPLIFTAGTGTEANPEPTEPAPDAGSRPFQRIAVGIDFSPASLHALDVTRTRFPGARL CCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCEE RLLHVTDARVATTPDLGGGVIPTGPSSALLQTLETADADRLAQLAQGSEETELLVGDPVT EEEEECCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCEEEECCCCH GILDAAERWGAELIVVGTHAQGAIEHFLLGSSAEKLISRSSVPVLTVRLPRAQAARR HHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCHHHHHHCCCCCEEEEECCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA