| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is dck [H]
Identifier: 94984209
GI number: 94984209
Start: 95398
End: 96021
Strand: Reverse
Name: dck [H]
Synonym: Dgeo_0101
Alternate gene names: 94984209
Gene position: 96021-95398 (Counterclockwise)
Preceding gene: 94984210
Following gene: 94984207
Centisome position: 3.89
GC content: 61.86
Gene sequence:
>624_bases ATGTACCTCGCCCTCTCCGGCAACATCGGCAGCGGCAAGAGCACCCTCACACGGATGCTGGCCGAACGATACGGTTTGCG GCCCGTGTATGAGCCATACGCGGAAAATCCCTACCTAGAAGATTTTTACCGCGACATGCGGCGCTATTCCTTTCACAGTC AGGTGTACTTCCTCTCGCGACGACTGGAACAGCATCTGAACCTGGTCACGGGCGCGCGGTACGTGATCCAGGACCGCACC GTGTTCGAAGACGCCAACATCTTCGCGCGGAACCTCTTTGAATCGGGGCAGATGGAGGCGCGCGACTGGGCCACCTACCT GGGCCTGTACCAGGGGATCCTCCCCGCGCTGCGGGTGCCTGATCTCCTGATTCACATCGACGCCAGTGTGCCCACCCTGA AAAAACGCATCGCGCAGCGCGGGCGGGCCTATGAAAAGGCAATTCCCGACACCTACCTGGCAGGACTCAACCGGCTCTAC GCACAGTGGATCGAGAACTTTGACGCCTGTCCCGTGATGCGGGTCCCAGGCGACGAACTCGACTTCGTGCAGGACCCGGC CGCCTTCCGCTGGGTATGTGACCGGGTGCAGGCCTACGGCTTCGGGCTGCCGCTGCTGCGCTAA
Upstream 100 bases:
>100_bases GCGGCCCTACCCACCCGAACAGAGGAAGGTACGGCCTGATGAGGCATGCGGCACAGGGCGTGAGGAGCGAGAAAACCAGC TTCTCCCCAGGGAGGCCCTG
Downstream 100 bases:
>100_bases GACACAGCAGGGCCAGCTCCAGGCTCAGGCCCCTGCGCCTTCCCCCACATGCTCCAGGACGTTTCGCAGCAGGTCCGTCA CATGCGCGTCGGCCAGGCGG
Product: deoxynucleoside kinase
Products: NA
Alternate protein names: dAK/dCK [H]
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MYLALSGNIGSGKSTLTRMLAERYGLRPVYEPYAENPYLEDFYRDMRRYSFHSQVYFLSRRLEQHLNLVTGARYVIQDRT VFEDANIFARNLFESGQMEARDWATYLGLYQGILPALRVPDLLIHIDASVPTLKKRIAQRGRAYEKAIPDTYLAGLNRLY AQWIENFDACPVMRVPGDELDFVQDPAAFRWVCDRVQAYGFGLPLLR
Sequences:
>Translated_207_residues MYLALSGNIGSGKSTLTRMLAERYGLRPVYEPYAENPYLEDFYRDMRRYSFHSQVYFLSRRLEQHLNLVTGARYVIQDRT VFEDANIFARNLFESGQMEARDWATYLGLYQGILPALRVPDLLIHIDASVPTLKKRIAQRGRAYEKAIPDTYLAGLNRLY AQWIENFDACPVMRVPGDELDFVQDPAAFRWVCDRVQAYGFGLPLLR >Mature_207_residues MYLALSGNIGSGKSTLTRMLAERYGLRPVYEPYAENPYLEDFYRDMRRYSFHSQVYFLSRRLEQHLNLVTGARYVIQDRT VFEDANIFARNLFESGQMEARDWATYLGLYQGILPALRVPDLLIHIDASVPTLKKRIAQRGRAYEKAIPDTYLAGLNRLY AQWIENFDACPVMRVPGDELDFVQDPAAFRWVCDRVQAYGFGLPLLR
Specific function: Plays an essential role in generating the deoxyribonucleotide precursors dATP AND dCTP for DNA metabolism. The phosphate acceptor specificity is strict toward deoxyadenosine (dAdo) and deoxycytidine (dCyd). The specificity toward the sugar moiety of the n
COG id: COG1428
COG function: function code F; Deoxynucleoside kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DCK/DGK family [H]
Homologues:
Organism=Homo sapiens, GI290656975, Length=189, Percent_Identity=26.984126984127, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI290656936, Length=189, Percent_Identity=26.984126984127, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI18426967, Length=217, Percent_Identity=29.4930875576037, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002624 [H]
Pfam domain/function: PF01712 dNK [H]
EC number: =2.7.1.74; =2.7.1.76 [H]
Molecular weight: Translated: 24033; Mature: 24033
Theoretical pI: Translated: 8.16; Mature: 8.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLALSGNIGSGKSTLTRMLAERYGLRPVYEPYAENPYLEDFYRDMRRYSFHSQVYFLSR CEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH RLEQHLNLVTGARYVIQDRTVFEDANIFARNLFESGQMEARDWATYLGLYQGILPALRVP HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC DLLIHIDASVPTLKKRIAQRGRAYEKAIPDTYLAGLNRLYAQWIENFDACPVMRVPGDEL CEEEEECCCCHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCC DFVQDPAAFRWVCDRVQAYGFGLPLLR CHHCCCHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MYLALSGNIGSGKSTLTRMLAERYGLRPVYEPYAENPYLEDFYRDMRRYSFHSQVYFLSR CEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH RLEQHLNLVTGARYVIQDRTVFEDANIFARNLFESGQMEARDWATYLGLYQGILPALRVP HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC DLLIHIDASVPTLKKRIAQRGRAYEKAIPDTYLAGLNRLYAQWIENFDACPVMRVPGDEL CEEEEECCCCHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCC DFVQDPAAFRWVCDRVQAYGFGLPLLR CHHCCCHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]