| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is dgk [H]
Identifier: 94984210
GI number: 94984210
Start: 96083
End: 96700
Strand: Reverse
Name: dgk [H]
Synonym: Dgeo_0102
Alternate gene names: 94984210
Gene position: 96700-96083 (Counterclockwise)
Preceding gene: 94984211
Following gene: 94984209
Centisome position: 3.92
GC content: 62.78
Gene sequence:
>618_bases ATGTACCTGGTCGTCGAAGGCCCCATCGGGGTAGGAAAAACGAGCCTGGCGGGGCGGCTTGCGGCGCGCTACGGCGCGGC ACTGAACCTGGAGGTCGTGGAGGAGAATCCCTTCCTGGCCCGCTTTTACGAGGCGCCGGAGACGTACGCTTTTCAAGTCC AGGTGTTTTTTCTGCTGTCACGCTTCAAGCAGCTTTCAAAGCTTGCGCAGCCGGGGCTGTGGAGCGGGAACGTCGTGAGT GACTATCTCTTCGACAAGGACTTCATCTTTGCCGCGATGAACCTCAAAGACGCCGAGTTCGCCCTGTATGAAGACCTCTA CGCGCATCTCTCGCCTCGGCTGCCCACGCCCGACCTGGTGATCTATCTGCGCGCCGAGCCGGAACTCCTCCTCGCGCGGA TCGAACAACGCGGGCGCCCCTTCGAGCGCGCCATGCAGGCAGACTACCTGCGTGAGCTGACCGCCCGTTACGACGCATAC TTCCGCACCTATCCGGGCCACGTTCTGACGGTGGACGCCAGCCACTACGACTTTGTGTGCCGCCCAGACGACGAACAGGC GCTCCTGGCCCACATCGCTGCGGCCCTACCCACCCGAACAGAGGAAGGTACGGCCTGA
Upstream 100 bases:
>100_bases ATCAACGAGTCGCTCTCCACACAATGTGCTCTGGCCCCTGCCAGAGCATGTTTTTTGAACGGCCAACCGCCGATCAACGA AAGCTCTATCATCTGGCGTC
Downstream 100 bases:
>100_bases TGAGGCATGCGGCACAGGGCGTGAGGAGCGAGAAAACCAGCTTCTCCCCAGGGAGGCCCTGATGTACCTCGCCCTCTCCG GCAACATCGGCAGCGGCAAG
Product: deoxynucleoside kinase
Products: NA
Alternate protein names: DGUO kinase; dGK [H]
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MYLVVEGPIGVGKTSLAGRLAARYGAALNLEVVEENPFLARFYEAPETYAFQVQVFFLLSRFKQLSKLAQPGLWSGNVVS DYLFDKDFIFAAMNLKDAEFALYEDLYAHLSPRLPTPDLVIYLRAEPELLLARIEQRGRPFERAMQADYLRELTARYDAY FRTYPGHVLTVDASHYDFVCRPDDEQALLAHIAAALPTRTEEGTA
Sequences:
>Translated_205_residues MYLVVEGPIGVGKTSLAGRLAARYGAALNLEVVEENPFLARFYEAPETYAFQVQVFFLLSRFKQLSKLAQPGLWSGNVVS DYLFDKDFIFAAMNLKDAEFALYEDLYAHLSPRLPTPDLVIYLRAEPELLLARIEQRGRPFERAMQADYLRELTARYDAY FRTYPGHVLTVDASHYDFVCRPDDEQALLAHIAAALPTRTEEGTA >Mature_205_residues MYLVVEGPIGVGKTSLAGRLAARYGAALNLEVVEENPFLARFYEAPETYAFQVQVFFLLSRFKQLSKLAQPGLWSGNVVS DYLFDKDFIFAAMNLKDAEFALYEDLYAHLSPRLPTPDLVIYLRAEPELLLARIEQRGRPFERAMQADYLRELTARYDAY FRTYPGHVLTVDASHYDFVCRPDDEQALLAHIAAALPTRTEEGTA
Specific function: Plays an essential role in generating the deoxyribonucleotide precursors dGTP for DNA metabolism. Highly specific toward deoxyguanosine (dGuo) and deoxyinosine (dIno). Only marginal activity is observed with guanosine. UTP is slightly more efficient as ph
COG id: COG1428
COG function: function code F; Deoxynucleoside kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DCK/DGK family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002624 [H]
Pfam domain/function: PF01712 dNK [H]
EC number: =2.7.1.113 [H]
Molecular weight: Translated: 23266; Mature: 23266
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLVVEGPIGVGKTSLAGRLAARYGAALNLEVVEENPFLARFYEAPETYAFQVQVFFLLS CEEEEECCCCCCCHHHHHHHHHHHCCEEEEEEEECCCCEEEEECCCCCEEEHHHHHHHHH RFKQLSKLAQPGLWSGNVVSDYLFDKDFIFAAMNLKDAEFALYEDLYAHLSPRLPTPDLV HHHHHHHHHCCCCCCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCEE IYLRAEPELLLARIEQRGRPFERAMQADYLRELTARYDAYFRTYPGHVLTVDASHYDFVC EEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCCEEEE RPDDEQALLAHIAAALPTRTEEGTA CCCCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MYLVVEGPIGVGKTSLAGRLAARYGAALNLEVVEENPFLARFYEAPETYAFQVQVFFLLS CEEEEECCCCCCCHHHHHHHHHHHCCEEEEEEEECCCCEEEEECCCCCEEEHHHHHHHHH RFKQLSKLAQPGLWSGNVVSDYLFDKDFIFAAMNLKDAEFALYEDLYAHLSPRLPTPDLV HHHHHHHHHCCCCCCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCEE IYLRAEPELLLARIEQRGRPFERAMQADYLRELTARYDAYFRTYPGHVLTVDASHYDFVC EEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCCEEEE RPDDEQALLAHIAAALPTRTEEGTA CCCCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]