| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94984164
Identifier: 94984164
GI number: 94984164
Start: 54073
End: 54783
Strand: Reverse
Name: 94984164
Synonym: Dgeo_0056
Alternate gene names: NA
Gene position: 54783-54073 (Counterclockwise)
Preceding gene: 94984171
Following gene: 94984163
Centisome position: 2.22
GC content: 66.81
Gene sequence:
>711_bases ATGACGAATGCCGTGTACACCCTGATCGTGCGCGCTCTGTCCGGCATCGTGTCCGAACGCGCTGCTGAAACCCTGCTGCG CGCCGCCCTGCGCGAGCAGGGCCTCACCGCCGAGGGCGTGACCGCCGGCGAGATGCAACGGGTGCTGTCTGGCCCGCTGC TGACCCGCCTCTCGGGGGTACTGCCCCCCGAGCGCGCCCGGGCCGAGCTGGGCAACCTGGCCGCCCAGCTCCAGAAGCAC TACCCCAAAGCTCCCACCCTCTTCTCTTCCCCAGCCGCCACCTGGGATGAGACCACCAGCACCCACTGGGAAGACATCGA CTTCAGCGCCGATGACTTTGAGTTTGATGACCCCGAATACACGGCCACGCCACCTGAGCGGCAGTACGCGCTGGGAACCG CAGCCGGGCAGGAGGCCCTGATTCAGGATCTGGGACGGATACCGGGCGTGCAGGGCGTGATGGTCTGCCGTGCGAGCGGC GAGGTGCTGCGCGAACGAGCCTTGTCGGGCAGCAGGAATCTCAGCAGTGTGATCGCCGCAACCGCCCTGCTGTTTCAAAA ACGGGCGCTCAACCTGATGTCGGCTGATATGGGCGGACAGACGGTGTGCATGCGGCCAGTGGGTGCCTACTGTGTGGCGG TGGTGGCAGGACCGCAGGTCAACATCGGGCGGTTGCTGGCCGAACTCCAGCAGGTGCGGGAGGCTGCGTGA
Upstream 100 bases:
>100_bases GGCGGTCAGAGAGGGAGATGGCCATGTCGTGCAGTCTAGCCCGCCCGCGTTAGTCCGATTTCTGTAAGGGGGCACCCCCT ATACTTTCGTCAGGTTTCTC
Downstream 100 bases:
>100_bases ACAGGGCCTCTACCCTGTTTCTGCTCGCCACGTTGGCGGTAGGAACAGCGGGGGCGCAGGACCTCAGCGCCTACCGCACC CTCGCCGGAAGCCTGGAGGC
Product: roadblock/LC7 domain-contain protein
Products: NA
Alternate protein names: Roadblock/LC7 Domain-Containing Protein
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MTNAVYTLIVRALSGIVSERAAETLLRAALREQGLTAEGVTAGEMQRVLSGPLLTRLSGVLPPERARAELGNLAAQLQKH YPKAPTLFSSPAATWDETTSTHWEDIDFSADDFEFDDPEYTATPPERQYALGTAAGQEALIQDLGRIPGVQGVMVCRASG EVLRERALSGSRNLSSVIAATALLFQKRALNLMSADMGGQTVCMRPVGAYCVAVVAGPQVNIGRLLAELQQVREAA
Sequences:
>Translated_236_residues MTNAVYTLIVRALSGIVSERAAETLLRAALREQGLTAEGVTAGEMQRVLSGPLLTRLSGVLPPERARAELGNLAAQLQKH YPKAPTLFSSPAATWDETTSTHWEDIDFSADDFEFDDPEYTATPPERQYALGTAAGQEALIQDLGRIPGVQGVMVCRASG EVLRERALSGSRNLSSVIAATALLFQKRALNLMSADMGGQTVCMRPVGAYCVAVVAGPQVNIGRLLAELQQVREAA >Mature_235_residues TNAVYTLIVRALSGIVSERAAETLLRAALREQGLTAEGVTAGEMQRVLSGPLLTRLSGVLPPERARAELGNLAAQLQKHY PKAPTLFSSPAATWDETTSTHWEDIDFSADDFEFDDPEYTATPPERQYALGTAAGQEALIQDLGRIPGVQGVMVCRASGE VLRERALSGSRNLSSVIAATALLFQKRALNLMSADMGGQTVCMRPVGAYCVAVVAGPQVNIGRLLAELQQVREAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25224; Mature: 25093
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNAVYTLIVRALSGIVSERAAETLLRAALREQGLTAEGVTAGEMQRVLSGPLLTRLSGV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCHHHHHHHCC LPPERARAELGNLAAQLQKHYPKAPTLFSSPAATWDETTSTHWEDIDFSADDFEFDDPEY CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TATPPERQYALGTAAGQEALIQDLGRIPGVQGVMVCRASGEVLRERALSGSRNLSSVIAA CCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHCCCCHHHHHHHH TALLFQKRALNLMSADMGGQTVCMRPVGAYCVAVVAGPQVNIGRLLAELQQVREAA HHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure TNAVYTLIVRALSGIVSERAAETLLRAALREQGLTAEGVTAGEMQRVLSGPLLTRLSGV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCHHHHHHHCC LPPERARAELGNLAAQLQKHYPKAPTLFSSPAATWDETTSTHWEDIDFSADDFEFDDPEY CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TATPPERQYALGTAAGQEALIQDLGRIPGVQGVMVCRASGEVLRERALSGSRNLSSVIAA CCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHCCCCHHHHHHHH TALLFQKRALNLMSADMGGQTVCMRPVGAYCVAVVAGPQVNIGRLLAELQQVREAA HHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA