| Definition | Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence. |
|---|---|
| Accession | NC_008010 |
| Length | 574,127 |
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The map label for this gene is yusP [H]
Identifier: 94972141
GI number: 94972141
Start: 352636
End: 354690
Strand: Direct
Name: yusP [H]
Synonym: Dgeo_2674
Alternate gene names: 94972141
Gene position: 352636-354690 (Clockwise)
Preceding gene: 94972142
Following gene: 94972133
Centisome position: 61.42
GC content: 64.72
Gene sequence:
>2055_bases ATGACCGCCTCTCCCTCGGCTACCCTGCCAGCGCCCACTTTCAACGACCAGGAGAAGCGCACCACCCTAATTGGCCTGCT GGTGGTTTTTCTCCTCGCGGCGCTGAGCCAGACCATCGTCAGTACGGCCATGCCGCGCATCATCGCGGACCTCCAGGGCT TTAACCTGTATTCTTGGGTCACCACCGCCTACCTGCTGGCCAGCACGGTGATGGTGCCGATCTACGGCAAGCTATCGGAC CTCTATGGCCGCAAGCCGATCCTGGTGTTCGGCATCGTGGTCTTCCTTATCGGCTCGGCACTCAGCGGTTTGAGCGGCGA ACCCTTCCTGGGGAACCTCCTCGGCGGCGGCATGAACCAGCTGATCGCCTTCCGCGCAGTGGCGGGCTTCGGGGGCGCCG CGCTTTTCACGACGGCCTTTACCATCCTGGCCGACATGTTTGCCCCTGCGGAGCGCGCGAAGTTCGGCGGCCTCTTCGGC GCCATTTTCGGCCTGGCCAGTGTGGTTGGTCCGGCGGTGGGCGGGTTCCTGACCGACAACCTCAGCTGGCGCTGGGTGTT CTATGTGAACCTGCCGCTTGGCCTGCTGGCTCTCTTCCTGATTCTCGCCAAGATGCCCCGGCTGACCCACCGGGCAGAAG GCCGCATTGACCTCCTGGGCGCGGCGCTTATTCTCTCAACTACCATTCCGCTGCTGCTGGCCCTCACTTGGGGCGGCACA ACCTACCCCTGGGACAGCGCCCGCATCATCACCCTGTTTGCCGTGAGCGCCGTCAGCCTGATTGTCTTTTTGTTGGTGGA GGCGCGCACCAAGGACGCCATTATCCCGCTCAGCCTCTTCCGGATCCGGATGTTCTCGCTGGGCAACCTGGCTGCCTTCA TCATGGGAATGGCGTTCCTGGGTGTGATCCTGTTCCTGCCGCTGTACATGCAGATGGTGCTGGGCGTCTCCCCCACCAAG AGCGGCTTCTCGATGCTGCCGCTGATGGGCGGCCTGATCCTCTCCAGCATCGGCGTCGGCCAGATTGTGGCCCGCACCGG CAAGTACAAGCCCTGGATGATCGGCGGCGGCGTGATCCTGATGCTGGGCATCTTTTTCCTGACCAAAATCACCACCCACA CCACCTTGGCGGACTTGGCCTGGCGAATGTTTGTCGTGGGTCTGGGCCTCGGCCCCTCGCAAAGCCTCTTTACGCTTGCC ATCCAGAATGCCGTCCCGCTGAACCAGTTGGGGATTGCCACCTCCAGCTCGCAGTTCTTCCGCCAGATCGGCTCCACCAT CGGCGCCGCCGTGTTCGGCACGCTGCTGCTGAACAATCTGCATACCGAGTTGCCCAAGCACCTGCCCCAGCTGCCCGGCA TGCAGATGAACGCGAACAACTTCGATCTGGGCGCGCTGCGGGCGAGTGCAAACGGCAGCGGCAACGGCCCCGAGCAGAAG ATTCAGGAAGCGTTGAATGCCCAGTACGCCCAGATCGAGCAGGCGCTGAACGGCGACGCGGCGGCGGCGCAGGCCATCGC GGCCAACCCCGCCCTGCCGGCCGAACTCAAGGCGCTGGTGGCGAACGGTGGGATCCAAGCCCAGGTCCACCAGAAGCTGA CGGCGCAGGCGACTCAGATTGCCAATGTGCTGAAAAACGGCGAGGCGGGCCGTCAGGCGCTGCTGAAGAGTCCCCAGACC CCCGCCGCCCTCAAGACCCAGCTCCAGGCCCTCCCCGCGCAGGCCCTCGCGACGCCGCAGGCCGCCGCCGCGACCGCGCA GCGGGTCAAGCAGGGCATCCTGGCGCAGGAACCCGCCGCCGTGCAGCAGGCCAAGCAGACAGTGCTGGCGCAGCTCAAGA CGCGGCTGAACGAACAGGCCAAGACGCTCGCCGCACAGCTCACCAACGGCATGAAAGAAGGCTTTACCGCCGCCATGACC CGCATGTTCGGGACGAGCATCTGGATCATCCTGGTGGGCTTCCTCGTCACGCTGTTTGTTCCGGCCATTCCGCTGCGGAA CCAGATGGAGAAGGCGGCGCCCAGCACCCCGGCCACGCCGAATCCTGCCGACTGA
Upstream 100 bases:
>100_bases CAATTCAGGCTCTCACTGGCGCGCGGCTCGCGCGGCTGGACACCCGGACCCTCAGCGGTCTGCTGGACGCCCTAGAGCTT CTGGCACAGGAGGAGTCGGT
Downstream 100 bases:
>100_bases GCGAACACACCTCAACCGTGGGCAATCCGGAAACGTGCCGGGTTGCCCCTGTTCGTTTCAGCGCCAGGCCCACAGCCTCA CACTACGGTCACGGCTTCCA
Product: EmrB/QacA family drug resistance transporter
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 684; Mature: 683
Protein sequence:
>684_residues MTASPSATLPAPTFNDQEKRTTLIGLLVVFLLAALSQTIVSTAMPRIIADLQGFNLYSWVTTAYLLASTVMVPIYGKLSD LYGRKPILVFGIVVFLIGSALSGLSGEPFLGNLLGGGMNQLIAFRAVAGFGGAALFTTAFTILADMFAPAERAKFGGLFG AIFGLASVVGPAVGGFLTDNLSWRWVFYVNLPLGLLALFLILAKMPRLTHRAEGRIDLLGAALILSTTIPLLLALTWGGT TYPWDSARIITLFAVSAVSLIVFLLVEARTKDAIIPLSLFRIRMFSLGNLAAFIMGMAFLGVILFLPLYMQMVLGVSPTK SGFSMLPLMGGLILSSIGVGQIVARTGKYKPWMIGGGVILMLGIFFLTKITTHTTLADLAWRMFVVGLGLGPSQSLFTLA IQNAVPLNQLGIATSSSQFFRQIGSTIGAAVFGTLLLNNLHTELPKHLPQLPGMQMNANNFDLGALRASANGSGNGPEQK IQEALNAQYAQIEQALNGDAAAAQAIAANPALPAELKALVANGGIQAQVHQKLTAQATQIANVLKNGEAGRQALLKSPQT PAALKTQLQALPAQALATPQAAAATAQRVKQGILAQEPAAVQQAKQTVLAQLKTRLNEQAKTLAAQLTNGMKEGFTAAMT RMFGTSIWIILVGFLVTLFVPAIPLRNQMEKAAPSTPATPNPAD
Sequences:
>Translated_684_residues MTASPSATLPAPTFNDQEKRTTLIGLLVVFLLAALSQTIVSTAMPRIIADLQGFNLYSWVTTAYLLASTVMVPIYGKLSD LYGRKPILVFGIVVFLIGSALSGLSGEPFLGNLLGGGMNQLIAFRAVAGFGGAALFTTAFTILADMFAPAERAKFGGLFG AIFGLASVVGPAVGGFLTDNLSWRWVFYVNLPLGLLALFLILAKMPRLTHRAEGRIDLLGAALILSTTIPLLLALTWGGT TYPWDSARIITLFAVSAVSLIVFLLVEARTKDAIIPLSLFRIRMFSLGNLAAFIMGMAFLGVILFLPLYMQMVLGVSPTK SGFSMLPLMGGLILSSIGVGQIVARTGKYKPWMIGGGVILMLGIFFLTKITTHTTLADLAWRMFVVGLGLGPSQSLFTLA IQNAVPLNQLGIATSSSQFFRQIGSTIGAAVFGTLLLNNLHTELPKHLPQLPGMQMNANNFDLGALRASANGSGNGPEQK IQEALNAQYAQIEQALNGDAAAAQAIAANPALPAELKALVANGGIQAQVHQKLTAQATQIANVLKNGEAGRQALLKSPQT PAALKTQLQALPAQALATPQAAAATAQRVKQGILAQEPAAVQQAKQTVLAQLKTRLNEQAKTLAAQLTNGMKEGFTAAMT RMFGTSIWIILVGFLVTLFVPAIPLRNQMEKAAPSTPATPNPAD >Mature_683_residues TASPSATLPAPTFNDQEKRTTLIGLLVVFLLAALSQTIVSTAMPRIIADLQGFNLYSWVTTAYLLASTVMVPIYGKLSDL YGRKPILVFGIVVFLIGSALSGLSGEPFLGNLLGGGMNQLIAFRAVAGFGGAALFTTAFTILADMFAPAERAKFGGLFGA IFGLASVVGPAVGGFLTDNLSWRWVFYVNLPLGLLALFLILAKMPRLTHRAEGRIDLLGAALILSTTIPLLLALTWGGTT YPWDSARIITLFAVSAVSLIVFLLVEARTKDAIIPLSLFRIRMFSLGNLAAFIMGMAFLGVILFLPLYMQMVLGVSPTKS GFSMLPLMGGLILSSIGVGQIVARTGKYKPWMIGGGVILMLGIFFLTKITTHTTLADLAWRMFVVGLGLGPSQSLFTLAI QNAVPLNQLGIATSSSQFFRQIGSTIGAAVFGTLLLNNLHTELPKHLPQLPGMQMNANNFDLGALRASANGSGNGPEQKI QEALNAQYAQIEQALNGDAAAAQAIAANPALPAELKALVANGGIQAQVHQKLTAQATQIANVLKNGEAGRQALLKSPQTP AALKTQLQALPAQALATPQAAAATAQRVKQGILAQEPAAVQQAKQTVLAQLKTRLNEQAKTLAAQLTNGMKEGFTAAMTR MFGTSIWIILVGFLVTLFVPAIPLRNQMEKAAPSTPATPNPAD
Specific function: Translocase That Confers Resistance To Substances Of High Hydrophobicity. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. EmrB family [H]
Homologues:
Organism=Escherichia coli, GI1789042, Length=461, Percent_Identity=27.114967462039, Blast_Score=131, Evalue=2e-31, Organism=Escherichia coli, GI87081983, Length=414, Percent_Identity=26.8115942028986, Blast_Score=106, Evalue=5e-24, Organism=Escherichia coli, GI1788710, Length=415, Percent_Identity=25.3012048192771, Blast_Score=105, Evalue=1e-23, Organism=Escherichia coli, GI1790195, Length=365, Percent_Identity=28.4931506849315, Blast_Score=102, Evalue=1e-22, Organism=Escherichia coli, GI1788392, Length=321, Percent_Identity=32.7102803738318, Blast_Score=91, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6322958, Length=523, Percent_Identity=25.0478011472275, Blast_Score=140, Evalue=6e-34, Organism=Saccharomyces cerevisiae, GI6319783, Length=403, Percent_Identity=24.8138957816377, Blast_Score=113, Evalue=8e-26, Organism=Saccharomyces cerevisiae, GI6325455, Length=259, Percent_Identity=29.7297297297297, Blast_Score=112, Evalue=3e-25, Organism=Saccharomyces cerevisiae, GI6319770, Length=448, Percent_Identity=26.7857142857143, Blast_Score=103, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6323735, Length=327, Percent_Identity=26.9113149847095, Blast_Score=102, Evalue=3e-22, Organism=Saccharomyces cerevisiae, GI6321663, Length=159, Percent_Identity=33.9622641509434, Blast_Score=96, Evalue=1e-20, Organism=Drosophila melanogaster, GI24654039, Length=223, Percent_Identity=29.1479820627803, Blast_Score=68, Evalue=3e-11, Organism=Drosophila melanogaster, GI24654037, Length=223, Percent_Identity=29.1479820627803, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI17864456, Length=223, Percent_Identity=29.1479820627803, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI24654041, Length=223, Percent_Identity=29.1479820627803, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI24654044, Length=164, Percent_Identity=32.3170731707317, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004638 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 - InterPro: IPR001411 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 72217; Mature: 72086
Theoretical pI: Translated: 10.66; Mature: 10.66
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASPSATLPAPTFNDQEKRTTLIGLLVVFLLAALSQTIVSTAMPRIIADLQGFNLYSWV CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH TTAYLLASTVMVPIYGKLSDLYGRKPILVFGIVVFLIGSALSGLSGEPFLGNLLGGGMNQ HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHH LIAFRAVAGFGGAALFTTAFTILADMFAPAERAKFGGLFGAIFGLASVVGPAVGGFLTDN HHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCC LSWRWVFYVNLPLGLLALFLILAKMPRLTHRAEGRIDLLGAALILSTTIPLLLALTWGGT CCEEEEEEEECCHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC TYPWDSARIITLFAVSAVSLIVFLLVEARTKDAIIPLSLFRIRMFSLGNLAAFIMGMAFL CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GVILFLPLYMQMVLGVSPTKSGFSMLPLMGGLILSSIGVGQIVARTGKYKPWMIGGGVIL HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEECCHHHH MLGIFFLTKITTHTTLADLAWRMFVVGLGLGPSQSLFTLAIQNAVPLNQLGIATSSSQFF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHCCCCCHHHHH RQIGSTIGAAVFGTLLLNNLHTELPKHLPQLPGMQMNANNFDLGALRASANGSGNGPEQK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHEEECCCCCCCCHHHH IQEALNAQYAQIEQALNGDAAAAQAIAANPALPAELKALVANGGIQAQVHQKLTAQATQI HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH ANVLKNGEAGRQALLKSPQTPAALKTQLQALPAQALATPQAAAATAQRVKQGILAQEPAA HHHHHCCCHHHHHHHCCCCCCHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHCCCCHH VQQAKQTVLAQLKTRLNEQAKTLAAQLTNGMKEGFTAAMTRMFGTSIWIILVGFLVTLFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PAIPLRNQMEKAAPSTPATPNPAD CCCCHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TASPSATLPAPTFNDQEKRTTLIGLLVVFLLAALSQTIVSTAMPRIIADLQGFNLYSWV CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH TTAYLLASTVMVPIYGKLSDLYGRKPILVFGIVVFLIGSALSGLSGEPFLGNLLGGGMNQ HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHH LIAFRAVAGFGGAALFTTAFTILADMFAPAERAKFGGLFGAIFGLASVVGPAVGGFLTDN HHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCC LSWRWVFYVNLPLGLLALFLILAKMPRLTHRAEGRIDLLGAALILSTTIPLLLALTWGGT CCEEEEEEEECCHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC TYPWDSARIITLFAVSAVSLIVFLLVEARTKDAIIPLSLFRIRMFSLGNLAAFIMGMAFL CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GVILFLPLYMQMVLGVSPTKSGFSMLPLMGGLILSSIGVGQIVARTGKYKPWMIGGGVIL HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEECCHHHH MLGIFFLTKITTHTTLADLAWRMFVVGLGLGPSQSLFTLAIQNAVPLNQLGIATSSSQFF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHCCCCCHHHHH RQIGSTIGAAVFGTLLLNNLHTELPKHLPQLPGMQMNANNFDLGALRASANGSGNGPEQK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHEEECCCCCCCCHHHH IQEALNAQYAQIEQALNGDAAAAQAIAANPALPAELKALVANGGIQAQVHQKLTAQATQI HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH ANVLKNGEAGRQALLKSPQTPAALKTQLQALPAQALATPQAAAATAQRVKQGILAQEPAA HHHHHCCCHHHHHHHCCCCCCHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHCCCCHH VQQAKQTVLAQLKTRLNEQAKTLAAQLTNGMKEGFTAAMTRMFGTSIWIILVGFLVTLFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PAIPLRNQMEKAAPSTPATPNPAD CCCCHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]