| Definition | Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence. |
|---|---|
| Accession | NC_008010 |
| Length | 574,127 |
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The map label for this gene is 94972142
Identifier: 94972142
GI number: 94972142
Start: 352187
End: 352639
Strand: Direct
Name: 94972142
Synonym: Dgeo_2675
Alternate gene names: NA
Gene position: 352187-352639 (Clockwise)
Preceding gene: 94972143
Following gene: 94972141
Centisome position: 61.34
GC content: 60.71
Gene sequence:
>453_bases GTGACTTTAGAGACCCTCCCCCCCCTGACGCAGGAGCAGGTCGGGCGATTCCTGACGAGCATGTGGCGCTTTCAACGCCA ACTCAAACAGGAACTTGATCCCCTGCTCGCCGCACAGCACGGCCTGGATTCCCGCAAGTTTTTCATCCTGAAAAGCATTC AGTCTGGACACCAGTATCCTACTGTGTTGGCTGAGAAGCTTCAGATTCCAGCGACCCTGCTCAGCCGCTATCTGGACCAA CTCGTCAAGCAGCAGTTGATCGAGCGGCAGATTGACGCCCAGGATTCGCGGCGCACCCACCTGAGCCTCACGGCGGCCGG CGAGAACGTGTTGGCAGACACCTGGGCTTCAATTCAGGCTCTCACTGGCGCGCGGCTCGCGCGGCTGGACACCCGGACCC TCAGCGGTCTGCTGGACGCCCTAGAGCTTCTGGCACAGGAGGAGTCGGTATGA
Upstream 100 bases:
>100_bases TCAGGCGAGACCGGAACCAACAAGCAGCAGCGCCGGGCGCAGAAGCCCTTCGCACAATCCAATACTTGACTGGAGTGAAC TATTGAAATAGTGTAGCGGG
Downstream 100 bases:
>100_bases CCGCCTCTCCCTCGGCTACCCTGCCAGCGCCCACTTTCAACGACCAGGAGAAGCGCACCACCCTAATTGGCCTGCTGGTG GTTTTTCTCCTCGCGGCGCT
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MTLETLPPLTQEQVGRFLTSMWRFQRQLKQELDPLLAAQHGLDSRKFFILKSIQSGHQYPTVLAEKLQIPATLLSRYLDQ LVKQQLIERQIDAQDSRRTHLSLTAAGENVLADTWASIQALTGARLARLDTRTLSGLLDALELLAQEESV
Sequences:
>Translated_150_residues MTLETLPPLTQEQVGRFLTSMWRFQRQLKQELDPLLAAQHGLDSRKFFILKSIQSGHQYPTVLAEKLQIPATLLSRYLDQ LVKQQLIERQIDAQDSRRTHLSLTAAGENVLADTWASIQALTGARLARLDTRTLSGLLDALELLAQEESV >Mature_149_residues TLETLPPLTQEQVGRFLTSMWRFQRQLKQELDPLLAAQHGLDSRKFFILKSIQSGHQYPTVLAEKLQIPATLLSRYLDQL VKQQLIERQIDAQDSRRTHLSLTAAGENVLADTWASIQALTGARLARLDTRTLSGLLDALELLAQEESV
Specific function: Unknown
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16949; Mature: 16818
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLETLPPLTQEQVGRFLTSMWRFQRQLKQELDPLLAAQHGLDSRKFFILKSIQSGHQYP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCH TVLAEKLQIPATLLSRYLDQLVKQQLIERQIDAQDSRRTHLSLTAAGENVLADTWASIQA HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEECCCCHHHHHHHHHHHH LTGARLARLDTRTLSGLLDALELLAQEESV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TLETLPPLTQEQVGRFLTSMWRFQRQLKQELDPLLAAQHGLDSRKFFILKSIQSGHQYP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCH TVLAEKLQIPATLLSRYLDQLVKQQLIERQIDAQDSRRTHLSLTAAGENVLADTWASIQA HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEECCCCHHHHHHHHHHHH LTGARLARLDTRTLSGLLDALELLAQEESV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA