| Definition | Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence. |
|---|---|
| Accession | NC_008010 |
| Length | 574,127 |
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The map label for this gene is glpK [H]
Identifier: 94971990
GI number: 94971990
Start: 524304
End: 525821
Strand: Direct
Name: glpK [H]
Synonym: Dgeo_2522
Alternate gene names: 94971990
Gene position: 524304-525821 (Clockwise)
Preceding gene: 94971991
Following gene: 94971989
Centisome position: 91.32
GC content: 66.8
Gene sequence:
>1518_bases ATGTCCCAGTACATCCTCGCCCTCGACCAAGGCACCACCAGCAGCCGCGCCATCGTCTTTGACCGCGAAGGCAATATCCG CTCGGTCGCGCAAAAAGAATTCGAGCAGATTTTTCCGCGTCCGGGCTGGGTCGAACATGACGCCCTAGAAATCTGGAGCA CCCAGAGCGGCGTGGCGCAGGAGGCCATCACGCGGGCCGGACTGCGAGCGTCTGATATCGCCGCCATCGGCATCACCAAC CAGCGCGAGACGACGGTGGTGTGGGACCGCCAGACCGGACAGCCGATTCACCACGCGATTGTCTGGCAGGACCGCCGCAC CGCCGCCTTCTGTGATGGACTGCGCGCGCAGGGTCTGGAAGCCACCTTCCAGCAGAAGACCGGACTCATCATCGACGCCT ATTTCAGTGGCACGAAGGTGCGCTGGATTCTAGACAACGTGGAGGGAGCGCGCGAACGAGCCGAACGGGGCGAACTGGCC TTTGGCACGATCGATTCCTGGCTGGTGTACAAACTGACGGGCGGCGCCCTCCACATCACCGACGCAACGAATGCCAGCCG CACCCTGCTCTACAACATCCACACCGGCGACTGGGACGACGAGCTGCTGGCTCTGCTGGATGTGCCGCGCGCCATGCTGC CGCAGGTGCGCGACAGCAGCGAGATCTACGGTGAGACGGCGGCGGGACTCCTGGGCAGCCGCATTCCCATCGCGGGCATC GCGGGGGATCAGCAGGCCGCGACCTTTGGGCAGGCCTGCCTGGAGCGCGGCATGGCGAAAAACACCTACGGCACCGGCTG CTTCATGCTGATGAATACGGGCAGCGACGCGGTGCCCAGCGGCAACAAGCTGCTGTCCACCGTTGCCTGGCAGCTCCAGG GTCAGCGGACCTACGCCCTGGAGGGCAGCATCTTTGTGGCGGGGGCAGTGGTGCAGTGGCTGCGCGATGGCCTGGGCATC ATCCGGTCGAGCAGTGAGGTGGAGGCGCTCGCGACCAGCGTGGAGTCGTCGGAGGGAGTCTTTCTGGTGCCTGCCTTTGT GGGCCTAGGGGCGCCCTACTGGGACAGCTACGCCCGCGGCACCCTCGTGGGCATCACCCGCGGCACCACCCGCGCGCACA TCGCCCGCGCCGCGCTGGAGGCCATTGCCTACCAGTCAGCCGAGCTGCTGGAGGCGATGGGGCAGGACAGCGGGGCACCC CTCAAGGAGCTGCGCGTGGACGGCGGCGCGAGCAACAACAACCTGCTGATGCAGTTTCAGGCCGACATCCTGGGCGTGCC TGTCGTCCGGCCCAAAGTGACGGAGACGACCGCACTGGGGGCCGCCTACCTGGCGGGGCTGGCGGTCGGGTATTGGCAAG GAACCGAGGAAATCACCCGTCTCTGGCAGGTGGACCGCGTCTTCCAGCCACAGATGGACGCCACTGAGCGCAAACGCCGC CTGAACCGCTGGCGCCGCGCGGTCGAGCGCAGCCGCGCCTGGGAGGAAACGGAGGAGGTGGCCGCCACGCAGGCGTAG
Upstream 100 bases:
>100_bases TTTGGGGCCGAACCATCCACCCGCCAAGCAGCCCAGGTGCAGCCAGCTAGCCGTTTGCCCGTCAGACCTTGAGACCGTTC AACTCTTCACAGGAGCTTCT
Downstream 100 bases:
>100_bases GTCACTGGAAAGAGAGAAGCGCGCCCGGACTGAGCTTCTCCGGGCGCGCGGTCCATCTTAAGGACTCGCTCAAGATGACT CGCCAGTGGACATTCGTTCA
Product: glycerol kinase
Products: NA
Alternate protein names: ATP:glycerol 3-phosphotransferase; Glycerokinase; GK [H]
Number of amino acids: Translated: 505; Mature: 504
Protein sequence:
>505_residues MSQYILALDQGTTSSRAIVFDREGNIRSVAQKEFEQIFPRPGWVEHDALEIWSTQSGVAQEAITRAGLRASDIAAIGITN QRETTVVWDRQTGQPIHHAIVWQDRRTAAFCDGLRAQGLEATFQQKTGLIIDAYFSGTKVRWILDNVEGARERAERGELA FGTIDSWLVYKLTGGALHITDATNASRTLLYNIHTGDWDDELLALLDVPRAMLPQVRDSSEIYGETAAGLLGSRIPIAGI AGDQQAATFGQACLERGMAKNTYGTGCFMLMNTGSDAVPSGNKLLSTVAWQLQGQRTYALEGSIFVAGAVVQWLRDGLGI IRSSSEVEALATSVESSEGVFLVPAFVGLGAPYWDSYARGTLVGITRGTTRAHIARAALEAIAYQSAELLEAMGQDSGAP LKELRVDGGASNNNLLMQFQADILGVPVVRPKVTETTALGAAYLAGLAVGYWQGTEEITRLWQVDRVFQPQMDATERKRR LNRWRRAVERSRAWEETEEVAATQA
Sequences:
>Translated_505_residues MSQYILALDQGTTSSRAIVFDREGNIRSVAQKEFEQIFPRPGWVEHDALEIWSTQSGVAQEAITRAGLRASDIAAIGITN QRETTVVWDRQTGQPIHHAIVWQDRRTAAFCDGLRAQGLEATFQQKTGLIIDAYFSGTKVRWILDNVEGARERAERGELA FGTIDSWLVYKLTGGALHITDATNASRTLLYNIHTGDWDDELLALLDVPRAMLPQVRDSSEIYGETAAGLLGSRIPIAGI AGDQQAATFGQACLERGMAKNTYGTGCFMLMNTGSDAVPSGNKLLSTVAWQLQGQRTYALEGSIFVAGAVVQWLRDGLGI IRSSSEVEALATSVESSEGVFLVPAFVGLGAPYWDSYARGTLVGITRGTTRAHIARAALEAIAYQSAELLEAMGQDSGAP LKELRVDGGASNNNLLMQFQADILGVPVVRPKVTETTALGAAYLAGLAVGYWQGTEEITRLWQVDRVFQPQMDATERKRR LNRWRRAVERSRAWEETEEVAATQA >Mature_504_residues SQYILALDQGTTSSRAIVFDREGNIRSVAQKEFEQIFPRPGWVEHDALEIWSTQSGVAQEAITRAGLRASDIAAIGITNQ RETTVVWDRQTGQPIHHAIVWQDRRTAAFCDGLRAQGLEATFQQKTGLIIDAYFSGTKVRWILDNVEGARERAERGELAF GTIDSWLVYKLTGGALHITDATNASRTLLYNIHTGDWDDELLALLDVPRAMLPQVRDSSEIYGETAAGLLGSRIPIAGIA GDQQAATFGQACLERGMAKNTYGTGCFMLMNTGSDAVPSGNKLLSTVAWQLQGQRTYALEGSIFVAGAVVQWLRDGLGII RSSSEVEALATSVESSEGVFLVPAFVGLGAPYWDSYARGTLVGITRGTTRAHIARAALEAIAYQSAELLEAMGQDSGAPL KELRVDGGASNNNLLMQFQADILGVPVVRPKVTETTALGAAYLAGLAVGYWQGTEEITRLWQVDRVFQPQMDATERKRRL NRWRRAVERSRAWEETEEVAATQA
Specific function: Key enzyme in the regulation of glycerol uptake and metabolism [H]
COG id: COG0554
COG function: function code C; Glycerol kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FGGY kinase family [H]
Homologues:
Organism=Homo sapiens, GI189409120, Length=505, Percent_Identity=47.7227722772277, Blast_Score=461, Evalue=1e-130, Organism=Homo sapiens, GI4504007, Length=505, Percent_Identity=47.7227722772277, Blast_Score=460, Evalue=1e-129, Organism=Homo sapiens, GI42794763, Length=511, Percent_Identity=47.1624266144814, Blast_Score=456, Evalue=1e-128, Organism=Homo sapiens, GI41393575, Length=501, Percent_Identity=47.1057884231537, Blast_Score=455, Evalue=1e-128, Organism=Homo sapiens, GI88196792, Length=508, Percent_Identity=34.0551181102362, Blast_Score=334, Evalue=1e-91, Organism=Escherichia coli, GI1790361, Length=499, Percent_Identity=61.1222444889779, Blast_Score=652, Evalue=0.0, Organism=Escherichia coli, GI1790005, Length=505, Percent_Identity=25.9405940594059, Blast_Score=112, Evalue=6e-26, Organism=Escherichia coli, GI1787789, Length=501, Percent_Identity=26.5469061876248, Blast_Score=101, Evalue=9e-23, Organism=Escherichia coli, GI1789168, Length=489, Percent_Identity=25.9713701431493, Blast_Score=101, Evalue=1e-22, Organism=Escherichia coli, GI1789987, Length=455, Percent_Identity=23.956043956044, Blast_Score=92, Evalue=6e-20, Organism=Escherichia coli, GI1789138, Length=302, Percent_Identity=23.1788079470199, Blast_Score=74, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17535599, Length=499, Percent_Identity=43.0861723446894, Blast_Score=400, Evalue=1e-112, Organism=Caenorhabditis elegans, GI71986140, Length=524, Percent_Identity=26.1450381679389, Blast_Score=189, Evalue=3e-48, Organism=Caenorhabditis elegans, GI71986147, Length=304, Percent_Identity=30.5921052631579, Blast_Score=139, Evalue=3e-33, Organism=Saccharomyces cerevisiae, GI6321755, Length=548, Percent_Identity=37.2262773722628, Blast_Score=320, Evalue=4e-88, Organism=Drosophila melanogaster, GI17864214, Length=510, Percent_Identity=44.3137254901961, Blast_Score=422, Evalue=1e-118, Organism=Drosophila melanogaster, GI24654573, Length=450, Percent_Identity=45.1111111111111, Blast_Score=392, Evalue=1e-109, Organism=Drosophila melanogaster, GI24655555, Length=472, Percent_Identity=43.4322033898305, Blast_Score=391, Evalue=1e-109, Organism=Drosophila melanogaster, GI24655560, Length=472, Percent_Identity=43.4322033898305, Blast_Score=391, Evalue=1e-109, Organism=Drosophila melanogaster, GI24655570, Length=472, Percent_Identity=43.4322033898305, Blast_Score=391, Evalue=1e-109, Organism=Drosophila melanogaster, GI24655574, Length=472, Percent_Identity=43.4322033898305, Blast_Score=391, Evalue=1e-109, Organism=Drosophila melanogaster, GI24655565, Length=472, Percent_Identity=43.4322033898305, Blast_Score=391, Evalue=1e-109, Organism=Drosophila melanogaster, GI19922058, Length=534, Percent_Identity=33.8951310861423, Blast_Score=283, Evalue=1e-76, Organism=Drosophila melanogaster, GI24652871, Length=501, Percent_Identity=34.9301397205589, Blast_Score=272, Evalue=5e-73, Organism=Drosophila melanogaster, GI24656367, Length=516, Percent_Identity=32.1705426356589, Blast_Score=258, Evalue=1e-68, Organism=Drosophila melanogaster, GI21357867, Length=531, Percent_Identity=31.2617702448211, Blast_Score=251, Evalue=8e-67, Organism=Drosophila melanogaster, GI24656372, Length=351, Percent_Identity=33.6182336182336, Blast_Score=191, Evalue=1e-48, Organism=Drosophila melanogaster, GI45552909, Length=304, Percent_Identity=31.5789473684211, Blast_Score=136, Evalue=4e-32,
Paralogues:
None
Copy number: 2,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000577 - InterPro: IPR018485 - InterPro: IPR018483 - InterPro: IPR018484 - InterPro: IPR005999 [H]
Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]
EC number: =2.7.1.30 [H]
Molecular weight: Translated: 55140; Mature: 55009
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: PS00933 FGGY_KINASES_1 ; PS00445 FGGY_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQYILALDQGTTSSRAIVFDREGNIRSVAQKEFEQIFPRPGWVEHDALEIWSTQSGVAQ CCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHH EAITRAGLRASDIAAIGITNQRETTVVWDRQTGQPIHHAIVWQDRRTAAFCDGLRAQGLE HHHHHCCCCCCCEEEEECCCCCCEEEEEECCCCCCCEEEEEECCCCHHHHHCCHHHCCCH ATFQQKTGLIIDAYFSGTKVRWILDNVEGARERAERGELAFGTIDSWLVYKLTGGALHIT HHHHHCCCEEEEEEECCCEEEEEEECCHHHHHHHHCCCEEEECCCCEEEEEEECCEEEEE DATNASRTLLYNIHTGDWDDELLALLDVPRAMLPQVRDSSEIYGETAAGLLGSRIPIAGI ECCCCCEEEEEEEECCCCHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEE AGDQQAATFGQACLERGMAKNTYGTGCFMLMNTGSDAVPSGNKLLSTVAWQLQGQRTYAL CCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEE EGSIFVAGAVVQWLRDGLGIIRSSSEVEALATSVESSEGVFLVPAFVGLGAPYWDSYARG CCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEHHHHCCCCHHHHHCCC TLVGITRGTTRAHIARAALEAIAYQSAELLEAMGQDSGAPLKELRVDGGASNNNLLMQFQ EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECCCCCCCCEEEEEE ADILGVPVVRPKVTETTALGAAYLAGLAVGYWQGTEEITRLWQVDRVFQPQMDATERKRR CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHH LNRWRRAVERSRAWEETEEVAATQA HHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SQYILALDQGTTSSRAIVFDREGNIRSVAQKEFEQIFPRPGWVEHDALEIWSTQSGVAQ CCEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHH EAITRAGLRASDIAAIGITNQRETTVVWDRQTGQPIHHAIVWQDRRTAAFCDGLRAQGLE HHHHHCCCCCCCEEEEECCCCCCEEEEEECCCCCCCEEEEEECCCCHHHHHCCHHHCCCH ATFQQKTGLIIDAYFSGTKVRWILDNVEGARERAERGELAFGTIDSWLVYKLTGGALHIT HHHHHCCCEEEEEEECCCEEEEEEECCHHHHHHHHCCCEEEECCCCEEEEEEECCEEEEE DATNASRTLLYNIHTGDWDDELLALLDVPRAMLPQVRDSSEIYGETAAGLLGSRIPIAGI ECCCCCEEEEEEEECCCCHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEE AGDQQAATFGQACLERGMAKNTYGTGCFMLMNTGSDAVPSGNKLLSTVAWQLQGQRTYAL CCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEE EGSIFVAGAVVQWLRDGLGIIRSSSEVEALATSVESSEGVFLVPAFVGLGAPYWDSYARG CCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEHHHHCCCCHHHHHCCC TLVGITRGTTRAHIARAALEAIAYQSAELLEAMGQDSGAPLKELRVDGGASNNNLLMQFQ EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECCCCCCCCEEEEEE ADILGVPVVRPKVTETTALGAAYLAGLAVGYWQGTEEITRLWQVDRVFQPQMDATERKRR CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHH LNRWRRAVERSRAWEETEEVAATQA HHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10567266 [H]