| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is bug
Identifier: 94314813
GI number: 94314813
Start: 93175
End: 94251
Strand: Direct
Name: bug
Synonym: Rmet_5894
Alternate gene names: NA
Gene position: 93175-94251 (Clockwise)
Preceding gene: 94314812
Following gene: 94314814
Centisome position: 3.61
GC content: 64.53
Gene sequence:
>1077_bases GTGCGCCCGCAACGGCGCACCTCGCGCGCCCGCGGCGCGCATTCCAAACATAAAAAGCTTTACCGGAGACAACACATCAT GCCCCAATGGCACCGCCGCGCGGCCCTTGCCGCGCTGACCTCGTTGGTCGCCTGCACGTTCACGCTTACCACCACGCCGG CCTTCGCGCAGAAGGAATTCCCGAGCAAGCCCATCATGCTGGTGGTGACCTATCCGCCCGGCGGACCCACCGACGCGATG GCCCGCACGCTGGCCGCTGCGTTGAAGAACAGCCTTGGCCAGCCAGTGGTCGTGGAGAACCGCGCGGGTGCGGGCGGCAA TATCGGCGCGGAAGTCGTCGCGCGTGCCGAGCCCGATGGCTACACGCTGATGTTCGGCACGTCGGCGCCGCTGGCCATCA ACGTCAGCCTGTATCGCAAGATCAACTACGACCCGGTCAAGAGCTTCGCGCCGGTGATCCAGATCGGCCAACTGCCCAAT GCGCTGGTGGTAAATCCGAGCGTGCCCGCGAAGAACGTGCAAGAGCTGATCGCGTACAGCAAGGCGCATCCGGGCAAGCT GTCCTATGCGTCGTCGGGCAATGGCGCATCGTCGCACCTGGCCGGCGTGCTGTTCAACAACCTGGCCGGCACCGACTTCC AGCATGTGCCATACAAGGGCACCGGCCCGGCGCTCAATGATCTGCTGGGTGGGCAGGTCAGCATGACGTTCACCGATGTG CTGACCGCGCTGCCGTTCATCAAGAGCGGCAAGGTGCGTGCGCTCGGGGTGACCACGAAAGGGCGTTCGCAGGCATTGCC CGATGTGCCCACCGTGGCGGAACAGGGTGTTGCCGGCTTCGATGTTTCGGTATTCTTCGGAGTGGTAGCACCTGCAGGTA CGCCACCGGAAGTCATCCGCAAGCTCAATCACGCATTTGCCGATGCGTTGGCACAGCCAGACGTGCGCAAGACGCTGCTG GCACAGGGGCTGGAGTTCGCGCCGGCCACCACGCCAGAGCAGCTTGGTGGCTTCGTGAAGTCGGAAGTCGGCAAATGGCG TTCCGTGGTGCAGAAGTCGGGCGCGCAGCTCGACTGA
Upstream 100 bases:
>100_bases ACCGTGGAGCCGCCCGCCGATGGCGTGGTGCGCGCGGCGGGGCCCGTGGACCAGATCAACGTGTTCTGACGGCTCACCCA GAGAACACCCAGGCAGTACG
Downstream 100 bases:
>100_bases TCATGACAAGAACAGGAGGAGACATGACGCCACTCACACCCGGCGCGCTGGCAGGCATTCGCGTAGTCGATCTGTCGCGC ATTCTGGGCGGCCCGCTTTG
Product: extra-cytoplasmic solute receptor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MRPQRRTSRARGAHSKHKKLYRRQHIMPQWHRRAALAALTSLVACTFTLTTTPAFAQKEFPSKPIMLVVTYPPGGPTDAM ARTLAAALKNSLGQPVVVENRAGAGGNIGAEVVARAEPDGYTLMFGTSAPLAINVSLYRKINYDPVKSFAPVIQIGQLPN ALVVNPSVPAKNVQELIAYSKAHPGKLSYASSGNGASSHLAGVLFNNLAGTDFQHVPYKGTGPALNDLLGGQVSMTFTDV LTALPFIKSGKVRALGVTTKGRSQALPDVPTVAEQGVAGFDVSVFFGVVAPAGTPPEVIRKLNHAFADALAQPDVRKTLL AQGLEFAPATTPEQLGGFVKSEVGKWRSVVQKSGAQLD
Sequences:
>Translated_358_residues MRPQRRTSRARGAHSKHKKLYRRQHIMPQWHRRAALAALTSLVACTFTLTTTPAFAQKEFPSKPIMLVVTYPPGGPTDAM ARTLAAALKNSLGQPVVVENRAGAGGNIGAEVVARAEPDGYTLMFGTSAPLAINVSLYRKINYDPVKSFAPVIQIGQLPN ALVVNPSVPAKNVQELIAYSKAHPGKLSYASSGNGASSHLAGVLFNNLAGTDFQHVPYKGTGPALNDLLGGQVSMTFTDV LTALPFIKSGKVRALGVTTKGRSQALPDVPTVAEQGVAGFDVSVFFGVVAPAGTPPEVIRKLNHAFADALAQPDVRKTLL AQGLEFAPATTPEQLGGFVKSEVGKWRSVVQKSGAQLD >Mature_358_residues MRPQRRTSRARGAHSKHKKLYRRQHIMPQWHRRAALAALTSLVACTFTLTTTPAFAQKEFPSKPIMLVVTYPPGGPTDAM ARTLAAALKNSLGQPVVVENRAGAGGNIGAEVVARAEPDGYTLMFGTSAPLAINVSLYRKINYDPVKSFAPVIQIGQLPN ALVVNPSVPAKNVQELIAYSKAHPGKLSYASSGNGASSHLAGVLFNNLAGTDFQHVPYKGTGPALNDLLGGQVSMTFTDV LTALPFIKSGKVRALGVTTKGRSQALPDVPTVAEQGVAGFDVSVFFGVVAPAGTPPEVIRKLNHAFADALAQPDVRKTLL AQGLEFAPATTPEQLGGFVKSEVGKWRSVVQKSGAQLD
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 37878; Mature: 37878
Theoretical pI: Translated: 10.67; Mature: 10.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPQRRTSRARGAHSKHKKLYRRQHIMPQWHRRAALAALTSLVACTFTLTTTPAFAQKEF CCCCHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHC PSKPIMLVVTYPPGGPTDAMARTLAAALKNSLGQPVVVENRAGAGGNIGAEVVARAEPDG CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHEEEECCCCC YTLMFGTSAPLAINVSLYRKINYDPVKSFAPVIQIGQLPNALVVNPSVPAKNVQELIAYS EEEEEECCCCEEEEEEEEEECCCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHH KAHPGKLSYASSGNGASSHLAGVLFNNLAGTDFQHVPYKGTGPALNDLLGGQVSMTFTDV CCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCEEHHHHHH LTALPFIKSGKVRALGVTTKGRSQALPDVPTVAEQGVAGFDVSVFFGVVAPAGTPPEVIR HHHHCHHCCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHCCCCCCHHHHH KLNHAFADALAQPDVRKTLLAQGLEFAPATTPEQLGGFVKSEVGKWRSVVQKSGAQLD HHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRPQRRTSRARGAHSKHKKLYRRQHIMPQWHRRAALAALTSLVACTFTLTTTPAFAQKEF CCCCHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHC PSKPIMLVVTYPPGGPTDAMARTLAAALKNSLGQPVVVENRAGAGGNIGAEVVARAEPDG CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHEEEECCCCC YTLMFGTSAPLAINVSLYRKINYDPVKSFAPVIQIGQLPNALVVNPSVPAKNVQELIAYS EEEEEECCCCEEEEEEEEEECCCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHH KAHPGKLSYASSGNGASSHLAGVLFNNLAGTDFQHVPYKGTGPALNDLLGGQVSMTFTDV CCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCEEHHHHHH LTALPFIKSGKVRALGVTTKGRSQALPDVPTVAEQGVAGFDVSVFFGVVAPAGTPPEVIR HHHHCHHCCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHCCCCCCHHHHH KLNHAFADALAQPDVRKTLLAQGLEFAPATTPEQLGGFVKSEVGKWRSVVQKSGAQLD HHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3299368 [H]