| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
Click here to switch to the map view.
The map label for this gene is 94314714
Identifier: 94314714
GI number: 94314714
Start: 2551963
End: 2553867
Strand: Reverse
Name: 94314714
Synonym: Rmet_5795
Alternate gene names: NA
Gene position: 2553867-2551963 (Counterclockwise)
Preceding gene: 94314716
Following gene: 94314712
Centisome position: 98.98
GC content: 66.93
Gene sequence:
>1905_bases ATGCTCGATGGCTGCCGGCCCTCGCCCACGCTCGCAGAAACGGGTACGCTTCGGGCATTTGGCGTGCGCAGAAATGGGTA CGCTTTGGCGGTCGAGGATGGTGGAGATGTCCGGCATCCTCCCGCAGCCGCTCGCAATCACCCGATGCCCACTACCCTCA CCCGAGAATCCCCAACCTGGCTGCCCGCCCCCGATAGCTGGCAATACCACCTGCTGCTCGGCGCGGCCGGGATGCTGATC CTGGGGCCGCTCGGCGGCATCGCCGCGGCCTACATGAACTTTTCGCTCGGGTTCTTCGTGGGGGGACAGGTACTGGCCGG CATTCTCGGGTCGGCCGTGACGGCGGGCTACGGCGCATCCGGGCGTCACGGCGCGAACTACATCCAGACCGCCGCCGCGT CCGTGGCTGGCATGAGCGGCATGGCCGTCGTGATCCAGGCGATGGGCTGGATGGGCATGACGCCGCCGCCGATGTGGCAG TTGATCAGCTATATGCTCTGCATCGGCATGTATGGGGTGGGCGTGGGAATGCTCTATACCCCGCTGCTGGTGGACCGGAT GCAGCTCACGTTCCCGTCCGGGCTCGCGGTGGCCAATATCCTGCGCGCGCTGACCGATCCCGTGCTGCTGCGGCGCTCGG TTGCCCGCCTGGCGGGCGGCACCGGGCTTGGCGTGCTGGCGAGCATCGGTGCCACACGCGTGGTATGGCTTGGCGCGATC GACCTGTCGGCTTCCACGTTTGGCGCGGGCATGATCGTCGGTGCCCGCATTGGCATCGCGGCGCTGGTCGGCGGGCTCGC GAGCTGGGCGTTGACGCCGTACTTTGTTTCCATCGGCTGGCTGGCACCGGGCGACCCCTATCGCAAGATCACGTTCCTGA TCGCGCTGGGCATGATCATGGGCGCGGCGGCCGTCGATGTGTCGCTGCTCCTGATGCGCGCGGCGCAACGCACGCGTGCC ATTGCCTCGGGCGGCAGGGCGCCGCAGCGCTGGATCGTCGCATGGGTAGCGGTCTGGGGCGCGGCGGTCGTGGCCACCGG CGTGGCCTGGTTCGGCCAACCGGTCGGCTATCAACTGATGGCCGTGGCACTGGTGCTGATATTCGCGCTAGTCAACGGCA TCTCGGTCGGCATGGTCGACCAGAATCCGATTTCGTCCGCGTTCGTGCTGACGGTGATCCTGATGGCGGCGGTGGGTTTG CGTCAGCCGCATGTCGGCTTGATTGCCGCAACCGTGCTGCTGGTCTCCACCGCGGAGGCGTGTGACATGCAGCAAGACCG TTCCACCGGCTGGCGCCTTGGCACCAATCGCATGATCCAGTTCGGCTATCAGGTCGCCGGTATCGTCGTGGGCGCGATCC TGGCGGTGCTGCTCGCGCGTCTGTTCATGGAAGCTTATCCGGTTCTGCGACTGGATCAGACCACGCTGCCCGCCGATGCG CAGCCCGCGCGCTGGACGTCGGCCATGACCTACAAGATTGTCGGTGCGCTGCGCAGCATGACTGAGGACAAGCCGTATCT GCGTCTGGCGGTATGGATCGGCCTGGGCATTGGGCTCGTCACCGAAGTCCTGCGCAAGCTGATAAGGGCGTCGGCGCGTT ATCGCCGGTTCGCGGAGCAGAGCCGTGTTGGCAAGGGCTGCGATTTCCTTCTGGATGCCGTGCTGCTGCCGTCGCCGTAT GCGTCGTCCTTCGGCGGCTTCGTCAACTTGCCCGCCGCCGCGTGGATGGCGGCCGGTGGCGTGGTCGCCAGCCTGGTCGA CAGCCGGGTGCAATCGTCATCAAAGGATGCGGCGTTGCCCGATGACATGAGCACGACATCGCTGGTCGGTGGCGGACTGA TCGCCGGCGATGCGCTGGCCGCGCTGGGGTTCGGCATCGCGGGCCTGCTGGCGGTCGTGCACTGA
Upstream 100 bases:
>100_bases GAGCAGAGCGGGCTTCATGACTTCAGGACGTAACGGCAAGGCGAGGGAGAGACTGCTTCTGGATGTCGGCTTCAGCGGCC GAAGCGCCATTTTATGCCTG
Downstream 100 bases:
>100_bases TACGGCGGACTAGATCACCTGCAGCATTGCGTGTGGCGGCTTGCGTGCGAGCAACCCCGACAGTTTCTTGAGCGCCATCG AAAGCTGCGCGCGCTCCGCC
Product: Oligopeptide transporter, OPT superfamily
Products: NA
Alternate protein names: OPT Superfamily Oligopeptide Transporter
Number of amino acids: Translated: 634; Mature: 634
Protein sequence:
>634_residues MLDGCRPSPTLAETGTLRAFGVRRNGYALAVEDGGDVRHPPAAARNHPMPTTLTRESPTWLPAPDSWQYHLLLGAAGMLI LGPLGGIAAAYMNFSLGFFVGGQVLAGILGSAVTAGYGASGRHGANYIQTAAASVAGMSGMAVVIQAMGWMGMTPPPMWQ LISYMLCIGMYGVGVGMLYTPLLVDRMQLTFPSGLAVANILRALTDPVLLRRSVARLAGGTGLGVLASIGATRVVWLGAI DLSASTFGAGMIVGARIGIAALVGGLASWALTPYFVSIGWLAPGDPYRKITFLIALGMIMGAAAVDVSLLLMRAAQRTRA IASGGRAPQRWIVAWVAVWGAAVVATGVAWFGQPVGYQLMAVALVLIFALVNGISVGMVDQNPISSAFVLTVILMAAVGL RQPHVGLIAATVLLVSTAEACDMQQDRSTGWRLGTNRMIQFGYQVAGIVVGAILAVLLARLFMEAYPVLRLDQTTLPADA QPARWTSAMTYKIVGALRSMTEDKPYLRLAVWIGLGIGLVTEVLRKLIRASARYRRFAEQSRVGKGCDFLLDAVLLPSPY ASSFGGFVNLPAAAWMAAGGVVASLVDSRVQSSSKDAALPDDMSTTSLVGGGLIAGDALAALGFGIAGLLAVVH
Sequences:
>Translated_634_residues MLDGCRPSPTLAETGTLRAFGVRRNGYALAVEDGGDVRHPPAAARNHPMPTTLTRESPTWLPAPDSWQYHLLLGAAGMLI LGPLGGIAAAYMNFSLGFFVGGQVLAGILGSAVTAGYGASGRHGANYIQTAAASVAGMSGMAVVIQAMGWMGMTPPPMWQ LISYMLCIGMYGVGVGMLYTPLLVDRMQLTFPSGLAVANILRALTDPVLLRRSVARLAGGTGLGVLASIGATRVVWLGAI DLSASTFGAGMIVGARIGIAALVGGLASWALTPYFVSIGWLAPGDPYRKITFLIALGMIMGAAAVDVSLLLMRAAQRTRA IASGGRAPQRWIVAWVAVWGAAVVATGVAWFGQPVGYQLMAVALVLIFALVNGISVGMVDQNPISSAFVLTVILMAAVGL RQPHVGLIAATVLLVSTAEACDMQQDRSTGWRLGTNRMIQFGYQVAGIVVGAILAVLLARLFMEAYPVLRLDQTTLPADA QPARWTSAMTYKIVGALRSMTEDKPYLRLAVWIGLGIGLVTEVLRKLIRASARYRRFAEQSRVGKGCDFLLDAVLLPSPY ASSFGGFVNLPAAAWMAAGGVVASLVDSRVQSSSKDAALPDDMSTTSLVGGGLIAGDALAALGFGIAGLLAVVH >Mature_634_residues MLDGCRPSPTLAETGTLRAFGVRRNGYALAVEDGGDVRHPPAAARNHPMPTTLTRESPTWLPAPDSWQYHLLLGAAGMLI LGPLGGIAAAYMNFSLGFFVGGQVLAGILGSAVTAGYGASGRHGANYIQTAAASVAGMSGMAVVIQAMGWMGMTPPPMWQ LISYMLCIGMYGVGVGMLYTPLLVDRMQLTFPSGLAVANILRALTDPVLLRRSVARLAGGTGLGVLASIGATRVVWLGAI DLSASTFGAGMIVGARIGIAALVGGLASWALTPYFVSIGWLAPGDPYRKITFLIALGMIMGAAAVDVSLLLMRAAQRTRA IASGGRAPQRWIVAWVAVWGAAVVATGVAWFGQPVGYQLMAVALVLIFALVNGISVGMVDQNPISSAFVLTVILMAAVGL RQPHVGLIAATVLLVSTAEACDMQQDRSTGWRLGTNRMIQFGYQVAGIVVGAILAVLLARLFMEAYPVLRLDQTTLPADA QPARWTSAMTYKIVGALRSMTEDKPYLRLAVWIGLGIGLVTEVLRKLIRASARYRRFAEQSRVGKGCDFLLDAVLLPSPY ASSFGGFVNLPAAAWMAAGGVVASLVDSRVQSSSKDAALPDDMSTTSLVGGGLIAGDALAALGFGIAGLLAVVH
Specific function: Unknown
COG id: COG1297
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66070; Mature: 66070
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDGCRPSPTLAETGTLRAFGVRRNGYALAVEDGGDVRHPPAAARNHPMPTTLTRESPTW CCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC LPAPDSWQYHLLLGAAGMLILGPLGGIAAAYMNFSLGFFVGGQVLAGILGSAVTAGYGAS CCCCCCCCEEEHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GRHGANYIQTAAASVAGMSGMAVVIQAMGWMGMTPPPMWQLISYMLCIGMYGVGVGMLYT CCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH PLLVDRMQLTFPSGLAVANILRALTDPVLLRRSVARLAGGTGLGVLASIGATRVVWLGAI HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHEEEEEEE DLSASTFGAGMIVGARIGIAALVGGLASWALTPYFVSIGWLAPGDPYRKITFLIALGMIM ECCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHH GAAAVDVSLLLMRAAQRTRAIASGGRAPQRWIVAWVAVWGAAVVATGVAWFGQPVGYQLM HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH AVALVLIFALVNGISVGMVDQNPISSAFVLTVILMAAVGLRQPHVGLIAATVLLVSTAEA HHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH CDMQQDRSTGWRLGTNRMIQFGYQVAGIVVGAILAVLLARLFMEAYPVLRLDQTTLPADA HCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCC QPARWTSAMTYKIVGALRSMTEDKPYLRLAVWIGLGIGLVTEVLRKLIRASARYRRFAEQ CCCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRVGKGCDFLLDAVLLPSPYASSFGGFVNLPAAAWMAAGGVVASLVDSRVQSSSKDAALP HCCCCCHHHHHHHHHCCCCCHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC DDMSTTSLVGGGLIAGDALAALGFGIAGLLAVVH CCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLDGCRPSPTLAETGTLRAFGVRRNGYALAVEDGGDVRHPPAAARNHPMPTTLTRESPTW CCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC LPAPDSWQYHLLLGAAGMLILGPLGGIAAAYMNFSLGFFVGGQVLAGILGSAVTAGYGAS CCCCCCCCEEEHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GRHGANYIQTAAASVAGMSGMAVVIQAMGWMGMTPPPMWQLISYMLCIGMYGVGVGMLYT CCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH PLLVDRMQLTFPSGLAVANILRALTDPVLLRRSVARLAGGTGLGVLASIGATRVVWLGAI HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHEEEEEEE DLSASTFGAGMIVGARIGIAALVGGLASWALTPYFVSIGWLAPGDPYRKITFLIALGMIM ECCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHH GAAAVDVSLLLMRAAQRTRAIASGGRAPQRWIVAWVAVWGAAVVATGVAWFGQPVGYQLM HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH AVALVLIFALVNGISVGMVDQNPISSAFVLTVILMAAVGLRQPHVGLIAATVLLVSTAEA HHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH CDMQQDRSTGWRLGTNRMIQFGYQVAGIVVGAILAVLLARLFMEAYPVLRLDQTTLPADA HCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCC QPARWTSAMTYKIVGALRSMTEDKPYLRLAVWIGLGIGLVTEVLRKLIRASARYRRFAEQ CCCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRVGKGCDFLLDAVLLPSPYASSFGGFVNLPAAAWMAAGGVVASLVDSRVQSSSKDAALP HCCCCCHHHHHHHHHCCCCCHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC DDMSTTSLVGGGLIAGDALAALGFGIAGLLAVVH CCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA