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The map label for this gene is cyoA [H]

Identifier: 94314712

GI number: 94314712

Start: 2549485

End: 2550444

Strand: Reverse

Name: cyoA [H]

Synonym: Rmet_5793

Alternate gene names: 94314712

Gene position: 2550444-2549485 (Counterclockwise)

Preceding gene: 94314714

Following gene: 94314711

Centisome position: 98.85

GC content: 64.06

Gene sequence:

>960_bases
ATGCGTGAGCGAGTTACCGCCCCGGAGCATGTCCGCCGGCGGATACCCATCCCCCCCAAAGTCCGCGCGTGGCTCTACGT
CGCGGCTCCCCTGATCCTCAGCGGTTGTTCCTACGATCTGCTCTCCCCGAGCGGCGCCGTAGGTGTACAAACGCGCAACC
TGATCGTGTTGTCCACCGCGCTGATGCTGTTGGTGGTCATCCCGGTCATCATCCTGACGCTGGTGTTCGCGTGGCGGTAT
CGCGAGACCAACACCAAGGCCGAGTACGCGCCGCGCTGGTCGCATTCGACCAAGATCGAGGTCGTCGTCTGGGGCATCCC
GTGCGTGATCGTGGCGCTGCTCGGCATCATCATCTGGGACACCACGCACAAGCTCGACCCGTTCCGGCCGCTCGAGTCGA
AGGTGGCGCCGATAGAGGTGGACGTCGTCGCGCTCGACTGGAAGTGGCTGTTCATCTATCCGCAGTACGGCGTGGCATCG
CTGAACGAGCTACCTGTGCCGGTCGGCACGCCCATCAACTTCCGCATCACGGCCGAATCGACGATGAATGCACTGTTCAT
CCCGAAGCTCGGCAGCATGGTCTATGCGATGAGCGGGATGCAAACCAAGCTGCATCTGATCGCCGATGAAACTGGCGTGT
TCGACGGCCGCTCCGCGGCCTACAGCGGCGCCGGCTTCTCGGACATGCATTTCCGGACGGTTGCCACCTCGCGCGAGGAT
TTCGATGCGTGGATCGCCCGCGCCCGCGCGTCCGGCAACGTGCTCGACGAACAGACCTACCGCGCGCTGAAGCAGCCCAG
CAGCAAGGACCCGGTCACCATCTACGCAAACGTTTCGCCACGCCTGTTCCAGGGTGTCGTCGATCAATACATGGCCAGCA
ATGGCGACATCTGCCGCGCGGACAGCCCCGAGACGCTGCGCGCCGCTCTGCCGCCGCTGCCCGACACCGTGGAGCAATAA

Upstream 100 bases:

>100_bases
TCTTGTATGGATGTTGTCTTACCTTAGCATCCCGCGCACCTCAGGCCAATCCATACAAATACCCGGAATACGCCTGTGCC
CCCATCAATAGGTGTCTGAA

Downstream 100 bases:

>100_bases
CCCATGTTCGGAAAACTGACTCTCGATGCCATCCCCATGCACGAACCCATCATCATGGGCACGCTGGTGGTGGTACTGCT
GGGCGGCGCCGCCCTGTTCG

Product: cytochrome o ubiquinol oxidase subunit II

Products: NA

Alternate protein names: Cytochrome o subunit 2; Cytochrome o ubiquinol oxidase subunit 2; Oxidase BO(3) subunit 2; Ubiquinol oxidase polypeptide II [H]

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MRERVTAPEHVRRRIPIPPKVRAWLYVAAPLILSGCSYDLLSPSGAVGVQTRNLIVLSTALMLLVVIPVIILTLVFAWRY
RETNTKAEYAPRWSHSTKIEVVVWGIPCVIVALLGIIIWDTTHKLDPFRPLESKVAPIEVDVVALDWKWLFIYPQYGVAS
LNELPVPVGTPINFRITAESTMNALFIPKLGSMVYAMSGMQTKLHLIADETGVFDGRSAAYSGAGFSDMHFRTVATSRED
FDAWIARARASGNVLDEQTYRALKQPSSKDPVTIYANVSPRLFQGVVDQYMASNGDICRADSPETLRAALPPLPDTVEQ

Sequences:

>Translated_319_residues
MRERVTAPEHVRRRIPIPPKVRAWLYVAAPLILSGCSYDLLSPSGAVGVQTRNLIVLSTALMLLVVIPVIILTLVFAWRY
RETNTKAEYAPRWSHSTKIEVVVWGIPCVIVALLGIIIWDTTHKLDPFRPLESKVAPIEVDVVALDWKWLFIYPQYGVAS
LNELPVPVGTPINFRITAESTMNALFIPKLGSMVYAMSGMQTKLHLIADETGVFDGRSAAYSGAGFSDMHFRTVATSRED
FDAWIARARASGNVLDEQTYRALKQPSSKDPVTIYANVSPRLFQGVVDQYMASNGDICRADSPETLRAALPPLPDTVEQ
>Mature_319_residues
MRERVTAPEHVRRRIPIPPKVRAWLYVAAPLILSGCSYDLLSPSGAVGVQTRNLIVLSTALMLLVVIPVIILTLVFAWRY
RETNTKAEYAPRWSHSTKIEVVVWGIPCVIVALLGIIIWDTTHKLDPFRPLESKVAPIEVDVVALDWKWLFIYPQYGVAS
LNELPVPVGTPINFRITAESTMNALFIPKLGSMVYAMSGMQTKLHLIADETGVFDGRSAAYSGAGFSDMHFRTVATSRED
FDAWIARARASGNVLDEQTYRALKQPSSKDPVTIYANVSPRLFQGVVDQYMASNGDICRADSPETLRAALPPLPDTVEQ

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786635, Length=293, Percent_Identity=46.4163822525597, Blast_Score=298, Evalue=3e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012141
- InterPro:   IPR010514
- InterPro:   IPR008972
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759
- InterPro:   IPR006333 [H]

Pfam domain/function: PF00116 COX2; PF06481 COX_ARM [H]

EC number: 1.10.3.-

Molecular weight: Translated: 35409; Mature: 35409

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: PS50999 COX2_TM ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRERVTAPEHVRRRIPIPPKVRAWLYVAAPLILSGCSYDLLSPSGAVGVQTRNLIVLSTA
CCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHHH
LMLLVVIPVIILTLVFAWRYRETNTKAEYAPRWSHSTKIEVVVWGIPCVIVALLGIIIWD
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHC
TTHKLDPFRPLESKVAPIEVDVVALDWKWLFIYPQYGVASLNELPVPVGTPINFRITAES
CCCCCCCCCCHHCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEECC
TMNALFIPKLGSMVYAMSGMQTKLHLIADETGVFDGRSAAYSGAGFSDMHFRTVATSRED
CCCEEECCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCHH
FDAWIARARASGNVLDEQTYRALKQPSSKDPVTIYANVSPRLFQGVVDQYMASNGDICRA
HHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEECC
DSPETLRAALPPLPDTVEQ
CCCHHHHHHCCCCCHHHCC
>Mature Secondary Structure
MRERVTAPEHVRRRIPIPPKVRAWLYVAAPLILSGCSYDLLSPSGAVGVQTRNLIVLSTA
CCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHHH
LMLLVVIPVIILTLVFAWRYRETNTKAEYAPRWSHSTKIEVVVWGIPCVIVALLGIIIWD
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHC
TTHKLDPFRPLESKVAPIEVDVVALDWKWLFIYPQYGVASLNELPVPVGTPINFRITAES
CCCCCCCCCCHHCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEECC
TMNALFIPKLGSMVYAMSGMQTKLHLIADETGVFDGRSAAYSGAGFSDMHFRTVATSRED
CCCEEECCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCHH
FDAWIARARASGNVLDEQTYRALKQPSSKDPVTIYANVSPRLFQGVVDQYMASNGDICRA
HHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEECC
DSPETLRAALPPLPDTVEQ
CCCHHHHHHCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9868765 [H]