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The map label for this gene is kpsE [H]

Identifier: 94314649

GI number: 94314649

Start: 2490134

End: 2491240

Strand: Reverse

Name: kpsE [H]

Synonym: Rmet_5730

Alternate gene names: 94314649

Gene position: 2491240-2490134 (Counterclockwise)

Preceding gene: 94314650

Following gene: 94314648

Centisome position: 96.56

GC content: 60.7

Gene sequence:

>1107_bases
ATGAAAACGTTGTCCGGCGTTGCCACCGCGGCCCGCCGCTCCCCTCTTCTAGCCGCCTTCGTATTGTTCAGTCTGATCTC
TGGGCTGTACTGGGGCGTGATCGCCTCGGACCGCTATGTCTCGGAGGCCCACATTTACCTTCAGAAGACCAACGCCATAC
AGCAAAGCTCCGCCGATCTGATCTCGATCCTGGCCGGCTCCGGCGGCAACCGCGATCTGCTCCTGCTGCGTGACCACCTG
CTTTCCATCGATATGATGAAGCTGTTGGACAAGGACTTGCATCTGCGCGAACACTTCAGCGACCGACGCCGCGATTTGCT
CTCGCGGCTATGGTCCAAGGACGCGCCAGACGAGCGATTTCAGCGCTACTACCTTTCCCGCATCGAGGTCACCTACGACG
ACTATGCACAAGTGCTGTCGATCACCGCACAGGCCTATAGCCCGGAAATGGCGCGTGCGATCGCGCAGATGATGGTGACC
GAGGGCGAGAAGTATATGAATGCGCTGGATCACAAGACCGCGCATGACCAGGTCTCTTACATCGAGCAGCAAGTCTCGGC
GCTGGGTGTCCGCATGGTCGCGGCGCGCAAGGCCGTTCTGGCCTATCAGGATGCACATGGCCTGGTGTCACCCGGTAACG
CGGTGGAAAGTATCTCGGCAATCGCGAGTCGACTGGACGCCGAACTCTCTGACCTGATGACCAAGCGCGCCGCGTTGGCT
GGCTACCTGACTCCCGCTGCGCCGGACATTGTGCAACTCGACAGCCAGATTGCCGCGGTGAAATCCCAACTGCAAGCCGA
ACGCCAGCGCGTGGCCGCCAAGCGTGGTGGTGGGCTTAACGCCGTGGCAGAAGAGCAGGGCCGCCTGGAGGCCGAGGCTG
CGTTGGCCGACGATATGTACAAGACGGCATTGGTGGCACTTGAGACAGCGCGCGTGGAGTCGACCCGAAAGATCAAATCT
GTTGCAGTCCTGCAGTCGGCCAACCTGCCGGTATATCCCCTCGAGCCGCGGCGCATCTACAACATCCTTCTCTCTCTGCT
GGCCGCCGCAATGCTAACAGGGGTCCTGCACCTGCTTGTCGCCATCATTCGCGACCATCGCGATTGA

Upstream 100 bases:

>100_bases
AAAATTTTTGCGAGAAGGGAATCCTTATGAGCAATGGCGCCGCCTACTGGTTCGACGACATTGCAGATGCCCTCTCCGAG
TACAAGAAAAGTATAAACGC

Downstream 100 bases:

>100_bases
CTGACCTGATATGAAACGAATTGCCTGCTGCCTCGTCGCCGCATCTCTGCTCTTCTCATGGGCAGTGCACGCGCAGACGC
CCAACGTTCCGCTATCCATG

Product: putative capsule polysaccharide export inner-membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MKTLSGVATAARRSPLLAAFVLFSLISGLYWGVIASDRYVSEAHIYLQKTNAIQQSSADLISILAGSGGNRDLLLLRDHL
LSIDMMKLLDKDLHLREHFSDRRRDLLSRLWSKDAPDERFQRYYLSRIEVTYDDYAQVLSITAQAYSPEMARAIAQMMVT
EGEKYMNALDHKTAHDQVSYIEQQVSALGVRMVAARKAVLAYQDAHGLVSPGNAVESISAIASRLDAELSDLMTKRAALA
GYLTPAAPDIVQLDSQIAAVKSQLQAERQRVAAKRGGGLNAVAEEQGRLEAEAALADDMYKTALVALETARVESTRKIKS
VAVLQSANLPVYPLEPRRIYNILLSLLAAAMLTGVLHLLVAIIRDHRD

Sequences:

>Translated_368_residues
MKTLSGVATAARRSPLLAAFVLFSLISGLYWGVIASDRYVSEAHIYLQKTNAIQQSSADLISILAGSGGNRDLLLLRDHL
LSIDMMKLLDKDLHLREHFSDRRRDLLSRLWSKDAPDERFQRYYLSRIEVTYDDYAQVLSITAQAYSPEMARAIAQMMVT
EGEKYMNALDHKTAHDQVSYIEQQVSALGVRMVAARKAVLAYQDAHGLVSPGNAVESISAIASRLDAELSDLMTKRAALA
GYLTPAAPDIVQLDSQIAAVKSQLQAERQRVAAKRGGGLNAVAEEQGRLEAEAALADDMYKTALVALETARVESTRKIKS
VAVLQSANLPVYPLEPRRIYNILLSLLAAAMLTGVLHLLVAIIRDHRD
>Mature_368_residues
MKTLSGVATAARRSPLLAAFVLFSLISGLYWGVIASDRYVSEAHIYLQKTNAIQQSSADLISILAGSGGNRDLLLLRDHL
LSIDMMKLLDKDLHLREHFSDRRRDLLSRLWSKDAPDERFQRYYLSRIEVTYDDYAQVLSITAQAYSPEMARAIAQMMVT
EGEKYMNALDHKTAHDQVSYIEQQVSALGVRMVAARKAVLAYQDAHGLVSPGNAVESISAIASRLDAELSDLMTKRAALA
GYLTPAAPDIVQLDSQIAAVKSQLQAERQRVAAKRGGGLNAVAEEQGRLEAEAALADDMYKTALVALETARVESTRKIKS
VAVLQSANLPVYPLEPRRIYNILLSLLAAAMLTGVLHLLVAIIRDHRD

Specific function: Involved in the translocation of the polysialic acid capsule [H]

COG id: COG3524

COG function: function code M; Capsule polysaccharide export protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexC/CtrB/KpsE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005705 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40528; Mature: 40528

Theoretical pI: Translated: 7.95; Mature: 7.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLSGVATAARRSPLLAAFVLFSLISGLYWGVIASDRYVSEAHIYLQKTNAIQQSSADL
CCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEEHHHHHHHHHHHH
ISILAGSGGNRDLLLLRDHLLSIDMMKLLDKDLHLREHFSDRRRDLLSRLWSKDAPDERF
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
QRYYLSRIEVTYDDYAQVLSITAQAYSPEMARAIAQMMVTEGEKYMNALDHKTAHDQVSY
HHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHH
IEQQVSALGVRMVAARKAVLAYQDAHGLVSPGNAVESISAIASRLDAELSDLMTKRAALA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GYLTPAAPDIVQLDSQIAAVKSQLQAERQRVAAKRGGGLNAVAEEQGRLEAEAALADDMY
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHH
KTALVALETARVESTRKIKSVAVLQSANLPVYPLEPRRIYNILLSLLAAAMLTGVLHLLV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
AIIRDHRD
HHHHHCCC
>Mature Secondary Structure
MKTLSGVATAARRSPLLAAFVLFSLISGLYWGVIASDRYVSEAHIYLQKTNAIQQSSADL
CCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEEHHHHHHHHHHHH
ISILAGSGGNRDLLLLRDHLLSIDMMKLLDKDLHLREHFSDRRRDLLSRLWSKDAPDERF
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
QRYYLSRIEVTYDDYAQVLSITAQAYSPEMARAIAQMMVTEGEKYMNALDHKTAHDQVSY
HHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHH
IEQQVSALGVRMVAARKAVLAYQDAHGLVSPGNAVESISAIASRLDAELSDLMTKRAALA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GYLTPAAPDIVQLDSQIAAVKSQLQAERQRVAAKRGGGLNAVAEEQGRLEAEAALADDMY
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHH
KTALVALETARVESTRKIKSVAVLQSANLPVYPLEPRRIYNILLSLLAAAMLTGVLHLLV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
AIIRDHRD
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8253690 [H]