| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is 94314134
Identifier: 94314134
GI number: 94314134
Start: 1908823
End: 1910013
Strand: Reverse
Name: 94314134
Synonym: Rmet_5215
Alternate gene names: NA
Gene position: 1910013-1908823 (Counterclockwise)
Preceding gene: 94314135
Following gene: 94314132
Centisome position: 74.03
GC content: 61.63
Gene sequence:
>1191_bases ATGCAGCTCGACACGCTGAGCACTGAATCACAAGCCGACGGTGCGACGCCGGCGTTCCGCGTGATCCGTGCATGGTTGGC GAGCTTCGCGTGCTCGACGGCGCTCGTGGCGAGCCTCGTGCTCGGTGCATGTGCATCGAAGCCGATCGTCCCCTATTCGA CTGATACGCCTCCGCTCGTGCTGGTGCCGGCGCCCCTCGCCGGAGTGACGGACAAGCGGGGGCGCTTTCGCGAAATCTAT TGTGCTGTGCTCCAGACCCGTGGCTCAGCCCTTCCCGATTACCGTCCTTGCGACGAGGCACTGACCCGTGTGGGCAGCGA ACCTGCTGGCACCGGCAAGCCTGTCGATCTCGGTCCATCGAAACGGCATCTCATCGCAGCAGTTGTGGCAGGCATCGGGT ACGAATGTTTTAAGCCATGGCTGGATCCACCGGGAACTGTCGTAACCCATTTGCGCGAATTCGGCTATGACGCGACGATG ATCACCGTCGACGCGCTTTCGAGTTCGACGAACAACGCCCGTCAGATCCGTGACGCGATCATGGACATGTCGCTCGCGGT CAACGAACCGCGCATTGTATTGATGGGCTATTCAAAGGGCGCACCCGATATCCTCGAGGCCGTCGTCACGTACCCAGAGA TCCGCAGCCGTGTGGCCGCCGTGGTTAGCGCGGCCGGCGCCGTCGGTGGGTCGCCACTCGCCAATGATGCCGAGCAGTAT CAGGCCGACTTGCTGCGGCACTTCCCGGGTGCGACGTGCTCGTCGGGAGATGGCGGTGCGGTGGAGAGCTTGCGGCCTCA GACACGCAAAGCATGGCTTGCACAGAACCCTCTGCCATACGATCTGCCCATCTACTCGATCGTCACGTTCCCGCAACCGG AGCGCATTTCGTCGATTCTCAGATCGAGCTACAACAAGCTGTCCCGCATCGACGCGCGCAACGACAGCCAGATGATTTTC TATGACCAGATCGTGCCCGGGAGTACGCTTCTTGGCTATGTCAACGCTGACCATTGGGCGCTCGCCGTGCCCATCGCACG TACGCATGACACGGTCGGATCGTTGTTCGTCACGCAAAACGCGTATCCGCGAGAGGCACTGGCCGAGGCTTTGCTCCGTT TCGTCGAGGAAGATATGGCAGTGCCTGCGAGCCATGTTCCTTCCTCCGTGCGAAGACGGCCAGCGGACTGA
Upstream 100 bases:
>100_bases TTTTTCGTGACCCGTCCGCTCAGCGTTTCGGATGTGCAGTTTCTTGACTGGGTGCCCTATCTTGAGCAGCGAGAGCGTTT CCAAAGCGAGGAGAGCGACG
Downstream 100 bases:
>100_bases GCAAACAGGAAACAACGCTGCGGTCTTTAGCAAGATCCGCCCGAACGGTAACTGTACCGTCCCAGCGCCCACGCCCATGC ATTACTGATCGATGTGACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MQLDTLSTESQADGATPAFRVIRAWLASFACSTALVASLVLGACASKPIVPYSTDTPPLVLVPAPLAGVTDKRGRFREIY CAVLQTRGSALPDYRPCDEALTRVGSEPAGTGKPVDLGPSKRHLIAAVVAGIGYECFKPWLDPPGTVVTHLREFGYDATM ITVDALSSSTNNARQIRDAIMDMSLAVNEPRIVLMGYSKGAPDILEAVVTYPEIRSRVAAVVSAAGAVGGSPLANDAEQY QADLLRHFPGATCSSGDGGAVESLRPQTRKAWLAQNPLPYDLPIYSIVTFPQPERISSILRSSYNKLSRIDARNDSQMIF YDQIVPGSTLLGYVNADHWALAVPIARTHDTVGSLFVTQNAYPREALAEALLRFVEEDMAVPASHVPSSVRRRPAD
Sequences:
>Translated_396_residues MQLDTLSTESQADGATPAFRVIRAWLASFACSTALVASLVLGACASKPIVPYSTDTPPLVLVPAPLAGVTDKRGRFREIY CAVLQTRGSALPDYRPCDEALTRVGSEPAGTGKPVDLGPSKRHLIAAVVAGIGYECFKPWLDPPGTVVTHLREFGYDATM ITVDALSSSTNNARQIRDAIMDMSLAVNEPRIVLMGYSKGAPDILEAVVTYPEIRSRVAAVVSAAGAVGGSPLANDAEQY QADLLRHFPGATCSSGDGGAVESLRPQTRKAWLAQNPLPYDLPIYSIVTFPQPERISSILRSSYNKLSRIDARNDSQMIF YDQIVPGSTLLGYVNADHWALAVPIARTHDTVGSLFVTQNAYPREALAEALLRFVEEDMAVPASHVPSSVRRRPAD >Mature_396_residues MQLDTLSTESQADGATPAFRVIRAWLASFACSTALVASLVLGACASKPIVPYSTDTPPLVLVPAPLAGVTDKRGRFREIY CAVLQTRGSALPDYRPCDEALTRVGSEPAGTGKPVDLGPSKRHLIAAVVAGIGYECFKPWLDPPGTVVTHLREFGYDATM ITVDALSSSTNNARQIRDAIMDMSLAVNEPRIVLMGYSKGAPDILEAVVTYPEIRSRVAAVVSAAGAVGGSPLANDAEQY QADLLRHFPGATCSSGDGGAVESLRPQTRKAWLAQNPLPYDLPIYSIVTFPQPERISSILRSSYNKLSRIDARNDSQMIF YDQIVPGSTLLGYVNADHWALAVPIARTHDTVGSLFVTQNAYPREALAEALLRFVEEDMAVPASHVPSSVRRRPAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42552; Mature: 42552
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: PS00445 FGGY_KINASES_2 ; PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLDTLSTESQADGATPAFRVIRAWLASFACSTALVASLVLGACASKPIVPYSTDTPPLV CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE LVPAPLAGVTDKRGRFREIYCAVLQTRGSALPDYRPCDEALTRVGSEPAGTGKPVDLGPS EECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCC KRHLIAAVVAGIGYECFKPWLDPPGTVVTHLREFGYDATMITVDALSSSTNNARQIRDAI HHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEEHHCCCCCHHHHHHHHH MDMSLAVNEPRIVLMGYSKGAPDILEAVVTYPEIRSRVAAVVSAAGAVGGSPLANDAEQY HHHHHCCCCCEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHH QADLLRHFPGATCSSGDGGAVESLRPQTRKAWLAQNPLPYDLPIYSIVTFPQPERISSIL HHHHHHHCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHH RSSYNKLSRIDARNDSQMIFYDQIVPGSTLLGYVNADHWALAVPIARTHDTVGSLFVTQN HHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEECCCCEEEEEEHHHHHHHHHHEEEECC AYPREALAEALLRFVEEDMAVPASHVPSSVRRRPAD CCCHHHHHHHHHHHHHHHHCCCHHHCCHHHHCCCCC >Mature Secondary Structure MQLDTLSTESQADGATPAFRVIRAWLASFACSTALVASLVLGACASKPIVPYSTDTPPLV CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE LVPAPLAGVTDKRGRFREIYCAVLQTRGSALPDYRPCDEALTRVGSEPAGTGKPVDLGPS EECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCC KRHLIAAVVAGIGYECFKPWLDPPGTVVTHLREFGYDATMITVDALSSSTNNARQIRDAI HHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEEHHCCCCCHHHHHHHHH MDMSLAVNEPRIVLMGYSKGAPDILEAVVTYPEIRSRVAAVVSAAGAVGGSPLANDAEQY HHHHHCCCCCEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHH QADLLRHFPGATCSSGDGGAVESLRPQTRKAWLAQNPLPYDLPIYSIVTFPQPERISSIL HHHHHHHCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHH RSSYNKLSRIDARNDSQMIFYDQIVPGSTLLGYVNADHWALAVPIARTHDTVGSLFVTQN HHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEECCCCEEEEEEHHHHHHHHHHEEEECC AYPREALAEALLRFVEEDMAVPASHVPSSVRRRPAD CCCHHHHHHHHHHHHHHHHCCCHHHCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA