| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is 94314135
Identifier: 94314135
GI number: 94314135
Start: 1909988
End: 1911256
Strand: Reverse
Name: 94314135
Synonym: Rmet_5216
Alternate gene names: NA
Gene position: 1911256-1909988 (Counterclockwise)
Preceding gene: 94314136
Following gene: 94314134
Centisome position: 74.08
GC content: 62.33
Gene sequence:
>1269_bases ATGAGTGCGTCCGGGCGCCTGTGCGTCTTGTTGCGACGCGGTGCATCCAGCGCTCTGCTGCTTGCGCTCGGTGCGTGCGC AACATGGCAGCCGCCCACCGATGCCGGCGACGGTCCGCTGCGCGAGCGCGCCATCAGCGCGACCAGCCGCGACGTGCGTG TCAGTGCGACCGTACTCGGCAAGGAGGATAGCAAGCGCATGCTAGGTGCCGACGTGACGAGGATGCGCGTGCAGCCGGTA TGGGTGGAGATCCATAACGGGACGGCCCAACCGCTGTGGCTGCTGCGTTCGGGCACCGACCCGGACTACTTCTCGCCGCT CGAGGTGGCATGGTCGTTGCACACCCTGCTTGGCGGGACGATTAACCGGCGCATCGACGCTTACTTCAACGGTCTTGGGT TCAGGAACCCCATCCAGCCCGGGCAGACCCGCGCCGGCCTGCTGTTCACCAATCCCGACTACATCACAAAGTTCGTCAAT ATCGATTTCTTCGGCAGCAATACCTTGATACCGTTCACGCTGTATCTGCAGGTGCCAGACGACGAACGCTCTATGGCCGC ATCGCGGTCGCTGCTCATATTCCGCTACCCCGAAGCCGACATCCAGAACTACACCGACCTGGCGTCGCTGCGGGCCGCAC TCGAGACGCTGCCAGCCTGCGCCACGGATGCAAGCGGCACCGGTCAGGGCGATCCATTGAACGCGGTGATTGTCGGCGAG ATCGACGACATCAGCGCTGCGGCAGTGCGTCGAAACTACCGGCGCGATCTGCGCCAGTCCGACCTCCCTCAGCGGGTGTT AGACCGTCAACCGGACGTAGTCACGCGCAAGCAGGCACAGGCCGGCGCACCTGCGATATGGATACGCGGATGGCTCACGC CCATTCGATTTCAGGGGCAGCCTGTCTTCGTCGCCCAAGTTGGACGCCCCGTTGGCGGGCGTTTCGCACGTACCGACGAT CAATCCGTGCTCTTGCAAAGTGACGTCGATGAGGCCAGAAATCTGTTTGTCCAGGACATGATGTATTCGGGCGGCCTCGA GAAGCTCGGCTTCGTGTATGGCGTCGGTGCTGCTTCGCTGCATTATCCGCGGACGACACTGGGCAATGCGACTTACCACA CCGACGGGTTACGTGCGGTTCTGTTTTTCGTGACCCGTCCGCTCAGCGTTTCGGATGTGCAGTTTCTTGACTGGGTGCCC TATCTTGAGCAGCGAGAGCGTTTCCAAAGCGAGGAGAGCGACGATGCAGCTCGACACGCTGAGCACTGA
Upstream 100 bases:
>100_bases CATTGCTCTCGGGAATCAGCCTGTTTCCGTGGAACATGGAAGACTTGCTCAAGTATCCAACTTCGACAACAAACACTGAA ATCAAGCCCGGAGCGAAGCC
Downstream 100 bases:
>100_bases ATCACAAGCCGACGGTGCGACGCCGGCGTTCCGCGTGATCCGTGCATGGTTGGCGAGCTTCGCGTGCTCGACGGCGCTCG TGGCGAGCCTCGTGCTCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 422; Mature: 421
Protein sequence:
>422_residues MSASGRLCVLLRRGASSALLLALGACATWQPPTDAGDGPLRERAISATSRDVRVSATVLGKEDSKRMLGADVTRMRVQPV WVEIHNGTAQPLWLLRSGTDPDYFSPLEVAWSLHTLLGGTINRRIDAYFNGLGFRNPIQPGQTRAGLLFTNPDYITKFVN IDFFGSNTLIPFTLYLQVPDDERSMAASRSLLIFRYPEADIQNYTDLASLRAALETLPACATDASGTGQGDPLNAVIVGE IDDISAAAVRRNYRRDLRQSDLPQRVLDRQPDVVTRKQAQAGAPAIWIRGWLTPIRFQGQPVFVAQVGRPVGGRFARTDD QSVLLQSDVDEARNLFVQDMMYSGGLEKLGFVYGVGAASLHYPRTTLGNATYHTDGLRAVLFFVTRPLSVSDVQFLDWVP YLEQRERFQSEESDDAARHAEH
Sequences:
>Translated_422_residues MSASGRLCVLLRRGASSALLLALGACATWQPPTDAGDGPLRERAISATSRDVRVSATVLGKEDSKRMLGADVTRMRVQPV WVEIHNGTAQPLWLLRSGTDPDYFSPLEVAWSLHTLLGGTINRRIDAYFNGLGFRNPIQPGQTRAGLLFTNPDYITKFVN IDFFGSNTLIPFTLYLQVPDDERSMAASRSLLIFRYPEADIQNYTDLASLRAALETLPACATDASGTGQGDPLNAVIVGE IDDISAAAVRRNYRRDLRQSDLPQRVLDRQPDVVTRKQAQAGAPAIWIRGWLTPIRFQGQPVFVAQVGRPVGGRFARTDD QSVLLQSDVDEARNLFVQDMMYSGGLEKLGFVYGVGAASLHYPRTTLGNATYHTDGLRAVLFFVTRPLSVSDVQFLDWVP YLEQRERFQSEESDDAARHAEH >Mature_421_residues SASGRLCVLLRRGASSALLLALGACATWQPPTDAGDGPLRERAISATSRDVRVSATVLGKEDSKRMLGADVTRMRVQPVW VEIHNGTAQPLWLLRSGTDPDYFSPLEVAWSLHTLLGGTINRRIDAYFNGLGFRNPIQPGQTRAGLLFTNPDYITKFVNI DFFGSNTLIPFTLYLQVPDDERSMAASRSLLIFRYPEADIQNYTDLASLRAALETLPACATDASGTGQGDPLNAVIVGEI DDISAAAVRRNYRRDLRQSDLPQRVLDRQPDVVTRKQAQAGAPAIWIRGWLTPIRFQGQPVFVAQVGRPVGGRFARTDDQ SVLLQSDVDEARNLFVQDMMYSGGLEKLGFVYGVGAASLHYPRTTLGNATYHTDGLRAVLFFVTRPLSVSDVQFLDWVPY LEQRERFQSEESDDAARHAEH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46656; Mature: 46525
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASGRLCVLLRRGASSALLLALGACATWQPPTDAGDGPLRERAISATSRDVRVSATVLG CCCCCCEEEEEECCCCCEEHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEC KEDSKRMLGADVTRMRVQPVWVEIHNGTAQPLWLLRSGTDPDYFSPLEVAWSLHTLLGGT CCCCCHHHCCCHHEEEEEEEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCH INRRIDAYFNGLGFRNPIQPGQTRAGLLFTNPDYITKFVNIDFFGSNTLIPFTLYLQVPD HHHHHHHHHCCCCCCCCCCCCCCCCCEEEECHHHEEEEEEEEEECCCCEEEEEEEEECCC DERSMAASRSLLIFRYPEADIQNYTDLASLRAALETLPACATDASGTGQGDPLNAVIVGE CHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEC IDDISAAAVRRNYRRDLRQSDLPQRVLDRQPDVVTRKQAQAGAPAIWIRGWLTPIRFQGQ CCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHCCCCEEEEEECCCEEEECCC PVFVAQVGRPVGGRFARTDDQSVLLQSDVDEARNLFVQDMMYSGGLEKLGFVYGVGAASL EEEEEECCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCHHHHHHEEECCCCCC HYPRTTLGNATYHTDGLRAVLFFVTRPLSVSDVQFLDWVPYLEQRERFQSEESDDAARHA CCCCHHCCCCEEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHC EH CC >Mature Secondary Structure SASGRLCVLLRRGASSALLLALGACATWQPPTDAGDGPLRERAISATSRDVRVSATVLG CCCCCEEEEEECCCCCEEHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEC KEDSKRMLGADVTRMRVQPVWVEIHNGTAQPLWLLRSGTDPDYFSPLEVAWSLHTLLGGT CCCCCHHHCCCHHEEEEEEEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCH INRRIDAYFNGLGFRNPIQPGQTRAGLLFTNPDYITKFVNIDFFGSNTLIPFTLYLQVPD HHHHHHHHHCCCCCCCCCCCCCCCCCEEEECHHHEEEEEEEEEECCCCEEEEEEEEECCC DERSMAASRSLLIFRYPEADIQNYTDLASLRAALETLPACATDASGTGQGDPLNAVIVGE CHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEC IDDISAAAVRRNYRRDLRQSDLPQRVLDRQPDVVTRKQAQAGAPAIWIRGWLTPIRFQGQ CCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHCCCCEEEEEECCCEEEECCC PVFVAQVGRPVGGRFARTDDQSVLLQSDVDEARNLFVQDMMYSGGLEKLGFVYGVGAASL EEEEEECCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCHHHHHHEEECCCCCC HYPRTTLGNATYHTDGLRAVLFFVTRPLSVSDVQFLDWVPYLEQRERFQSEESDDAARHA CCCCHHCCCCEEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHC EH CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA